RNA–Protein interactions for RNA: ENST00000585749.5

SDF2-203, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 823 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-203ENST00000585749 GRIN2AQ12879 1464 aa16.85■□□□□ 0.29
SDF2-203ENST00000585749 ABCA10Q8WWZ4 1543 aa16.85■□□□□ 0.29
SDF2-203ENST00000585749 SHROOM2Q13796 1616 aa16.82■□□□□ 0.28
SDF2-203ENST00000585749 NUP160Q12769 1436 aa16.81■□□□□ 0.28
SDF2-203ENST00000585749 ADAMTS12P58397 1594 aa16.79■□□□□ 0.28
SDF2-203ENST00000585749 DMRT2Q9Y5R5 561 aa16.71■□□□□ 0.27
SDF2-203ENST00000585749 ABCC10Q5T3U5 1492 aa16.69■□□□□ 0.26
SDF2-203ENST00000585749 FHAD1B1AJZ9 1412 aa16.69■□□□□ 0.26
SDF2-203ENST00000585749 KDM4FA0A1W2PPD8 638 aa16.67■□□□□ 0.26
SDF2-203ENST00000585749 ILDR1Q86SU0 546 aaPredicted RBP16.67■□□□□ 0.26
SDF2-203ENST00000585749 PRG4Q92954 1404 aaPredicted RBP16.66■□□□□ 0.26
SDF2-203ENST00000585749 DIP2BQ9P265 1576 aa16.66■□□□□ 0.26
SDF2-203ENST00000585749 WRNQ14191 1432 aaPredicted RBP eCLIP16.65■□□□□ 0.26
SDF2-203ENST00000585749 FAM69CQ0P6D2 419 aa16.65■□□□□ 0.26
SDF2-203ENST00000585749 MAPKBP1O60336 1514 aa16.65■□□□□ 0.26
SDF2-203ENST00000585749 KDM6BO15054 1643 aa16.63■□□□□ 0.25
SDF2-203ENST00000585749 ERICH3Q5RHP9 1530 aa16.62■□□□□ 0.25
SDF2-203ENST00000585749 BIVM-ERCC5R4GMW8 1640 aa16.59■□□□□ 0.25
SDF2-203ENST00000585749 JPH4Q96JJ6 628 aa16.59■□□□□ 0.25
SDF2-203ENST00000585749 ADCY10Q96PN6 1610 aa16.59■□□□□ 0.25
SDF2-203ENST00000585749 SUPT5HO00267 1087 aaKnown RBP16.58■□□□□ 0.24
SDF2-203ENST00000585749 RUSC2Q8N2Y8 1516 aa16.58■□□□□ 0.24
SDF2-203ENST00000585749 TOP2BQ02880 1626 aa16.58■□□□□ 0.24
SDF2-203ENST00000585749 NPM1P06748 294 aaKnown RBP eCLIP16.55■□□□□ 0.24
SDF2-203ENST00000585749 TSPOAP1O95153 1857 aa16.54■□□□□ 0.24
SDF2-203ENST00000585749 CNKSR2Q8WXI2 1034 aa16.51■□□□□ 0.23
SDF2-203ENST00000585749 ADGRL1O94910 1474 aa16.42■□□□□ 0.22
SDF2-203ENST00000585749 PPRC1Q5VV67 1664 aaKnown RBP16.42■□□□□ 0.22
SDF2-203ENST00000585749 KIAA0586Q9BVV6 1533 aa16.4■□□□□ 0.22
SDF2-203ENST00000585749 NCBP3Q53F19 620 aaKnown RBP16.39■□□□□ 0.21
SDF2-203ENST00000585749 HECW2Q9P2P5 1572 aa16.38■□□□□ 0.21
SDF2-203ENST00000585749 GLI2P10070 1586 aa16.36■□□□□ 0.21
SDF2-203ENST00000585749 ABCC2Q92887 1545 aa16.34■□□□□ 0.21
SDF2-203ENST00000585749 PTPRGP23470 1445 aa16.32■□□□□ 0.2
SDF2-203ENST00000585749 ASXL2Q76L83 1435 aa16.32■□□□□ 0.2
SDF2-203ENST00000585749 COL17A1Q9UMD9 1497 aaPredicted RBP16.32■□□□□ 0.2
SDF2-203ENST00000585749 PLB1Q6P1J6 1458 aa16.31■□□□□ 0.2
SDF2-203ENST00000585749 CUL7Q14999 1698 aa16.29■□□□□ 0.2
SDF2-203ENST00000585749 KCNA4P22459 653 aa16.28■□□□□ 0.2
SDF2-203ENST00000585749 IGF1RP08069 1367 aa16.27■□□□□ 0.2
SDF2-203ENST00000585749 HOXD11P31277 338 aaPredicted RBP16.27■□□□□ 0.2
SDF2-203ENST00000585749 MAP3K4Q9Y6R4 1608 aa16.27■□□□□ 0.19
SDF2-203ENST00000585749 TNIKQ9UKE5 1360 aa16.26■□□□□ 0.19
SDF2-203ENST00000585749 RNF216Q9NWF9 866 aaPredicted RBP16.25■□□□□ 0.19
SDF2-203ENST00000585749 TTBK1Q5TCY1 1321 aaPredicted RBP16.24■□□□□ 0.19
SDF2-203ENST00000585749 UHRF1BP1LA0JNW5 1464 aa16.24■□□□□ 0.19
SDF2-203ENST00000585749 EPRSP07814 1512 aaKnown RBP16.24■□□□□ 0.19
SDF2-203ENST00000585749 CARMIL2Q6F5E8 1435 aa16.22■□□□□ 0.19
SDF2-203ENST00000585749 TEX14Q8IWB6 1497 aa16.22■□□□□ 0.19
SDF2-203ENST00000585749 NPM3O75607 178 aaKnown RBP16.2■□□□□ 0.18
SDF2-203ENST00000585749 KIF27Q86VH2 1401 aa16.19■□□□□ 0.18
SDF2-203ENST00000585749 UACAQ9BZF9 1416 aa16.19■□□□□ 0.18
SDF2-203ENST00000585749 KDM5BQ9UGL1 1544 aa16.19■□□□□ 0.18
SDF2-203ENST00000585749 IQGAP2Q13576 1575 aa16.18■□□□□ 0.18
SDF2-203ENST00000585749 ZCCHC11Q5TAX3 1644 aaKnown RBP16.16■□□□□ 0.18
SDF2-203ENST00000585749 DISP1Q96F81 1524 aa16.15■□□□□ 0.18
SDF2-203ENST00000585749 FBXO41Q8TF61 875 aa16.14■□□□□ 0.17
SDF2-203ENST00000585749 CARMIL1Q5VZK9 1371 aa16.13■□□□□ 0.17
SDF2-203ENST00000585749 WDR7Q9Y4E6 1490 aa16.09■□□□□ 0.17
SDF2-203ENST00000585749 KIF21BO75037 1637 aa16.07■□□□□ 0.16
SDF2-203ENST00000585749 MAGI3Q5TCQ9 1506 aa16.06■□□□□ 0.16
SDF2-203ENST00000585749 UGGT2Q9NYU1 1516 aa16.06■□□□□ 0.16
SDF2-203ENST00000585749 CFAP43Q8NDM7 1665 aa16.05■□□□□ 0.16
SDF2-203ENST00000585749 KIAA0556O60303 1618 aa16.05■□□□□ 0.16
SDF2-203ENST00000585749 CD109Q6YHK3 1445 aa16.02■□□□□ 0.16
SDF2-203ENST00000585749 DCAF8L1A6NGE4 600 aa16.01■□□□□ 0.15
SDF2-203ENST00000585749 PTPRMP28827 1452 aa15.97■□□□□ 0.15
SDF2-203ENST00000585749 ADAMTSL3P82987 1691 aa15.97■□□□□ 0.15
SDF2-203ENST00000585749 RAPGEF2Q9Y4G8 1499 aa15.95■□□□□ 0.14
SDF2-203ENST00000585749 ARAP3Q8WWN8 1544 aa15.94■□□□□ 0.14
SDF2-203ENST00000585749 ABCA8O94911 1581 aa15.94■□□□□ 0.14
SDF2-203ENST00000585749 KCNH8Q96L42 1107 aa15.93■□□□□ 0.14
SDF2-203ENST00000585749 PCF11O94913 1555 aaKnown RBP15.92■□□□□ 0.14
SDF2-203ENST00000585749 LMTK3Q96Q04 1460 aa15.9■□□□□ 0.14
SDF2-203ENST00000585749 BCORL1Q5H9F3 1711 aa15.88■□□□□ 0.13
SDF2-203ENST00000585749 CTTNBP2Q8WZ74 1663 aa15.88■□□□□ 0.13
SDF2-203ENST00000585749 MADDQ8WXG6 1647 aa15.87■□□□□ 0.13
SDF2-203ENST00000585749 GOLGA3Q08378 1498 aa15.85■□□□□ 0.13
SDF2-203ENST00000585749 ABCA9Q8IUA7 1624 aa15.83■□□□□ 0.13
SDF2-203ENST00000585749 FRMPD1Q5SYB0 1578 aa15.83■□□□□ 0.12
SDF2-203ENST00000585749 PHLDB1Q86UU1 1377 aa15.82■□□□□ 0.12
SDF2-203ENST00000585749 RAPGEF3O95398 923 aa15.81■□□□□ 0.12
SDF2-203ENST00000585749 RIMS1Q86UR5 1692 aaKnown RBP15.79■□□□□ 0.12
SDF2-203ENST00000585749 NEO1Q92859 1461 aa15.78■□□□□ 0.12
SDF2-203ENST00000585749 ATP10BO94823 1461 aa15.78■□□□□ 0.12
SDF2-203ENST00000585749 ARHGEF40Q8TER5 1519 aa15.76■□□□□ 0.11
SDF2-203ENST00000585749 ARID4BQ4LE39 1312 aaPredicted RBP15.75■□□□□ 0.11
SDF2-203ENST00000585749 ARID3CA6NKF2 412 aa15.75■□□□□ 0.11
SDF2-203ENST00000585749 HSPA2P54652 639 aa15.74■□□□□ 0.11
SDF2-203ENST00000585749 CERKQ8TCT0 537 aa15.73■□□□□ 0.11
SDF2-203ENST00000585749 ILDR2Q71H61 639 aa15.72■□□□□ 0.11
SDF2-203ENST00000585749 RICTORQ6R327 1708 aa15.71■□□□□ 0.1
SDF2-203ENST00000585749 SOCS7O14512 581 aa15.7■□□□□ 0.1
SDF2-203ENST00000585749 SIGLEC1Q9BZZ2 1709 aa15.69■□□□□ 0.1
SDF2-203ENST00000585749 DISP3Q9P2K9 1392 aa15.68■□□□□ 0.1
SDF2-203ENST00000585749 PRXQ9BXM0 1461 aa15.67■□□□□ 0.1
SDF2-203ENST00000585749 RAPGEF6Q8TEU7 1601 aa15.66■□□□□ 0.1
SDF2-203ENST00000585749 DENND4BO75064 1496 aaPredicted RBP15.65■□□□□ 0.1
SDF2-203ENST00000585749 FHOD3Q2V2M9 1422 aa15.65■□□□□ 0.1
SDF2-203ENST00000585749 FANCAO15360 1455 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 165.8 ms