RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 IGF1RP08069 1367 aa25.55■■□□□ 1.68
SDF2-202ENST00000585428 NPM1P06748 294 aaKnown RBP eCLIP25.44■■□□□ 1.66
SDF2-202ENST00000585428 KIF27Q86VH2 1401 aa25.43■■□□□ 1.66
SDF2-202ENST00000585428 KIAA0586Q9BVV6 1533 aa25.42■■□□□ 1.66
SDF2-202ENST00000585428 RUSC2Q8N2Y8 1516 aa25.42■■□□□ 1.66
SDF2-202ENST00000585428 FAM69CQ0P6D2 419 aa25.4■■□□□ 1.66
SDF2-202ENST00000585428 ABCC10Q5T3U5 1492 aa25.35■■□□□ 1.65
SDF2-202ENST00000585428 CARMIL1Q5VZK9 1371 aa25.32■■□□□ 1.64
SDF2-202ENST00000585428 KIF13AQ9H1H9 1805 aa25.32■■□□□ 1.64
SDF2-202ENST00000585428 MAPKBP1O60336 1514 aa25.29■■□□□ 1.64
SDF2-202ENST00000585428 ADCY10Q96PN6 1610 aa25.26■■□□□ 1.63
SDF2-202ENST00000585428 CUL7Q14999 1698 aa25.26■■□□□ 1.63
SDF2-202ENST00000585428 PTPRGP23470 1445 aa25.24■■□□□ 1.63
SDF2-202ENST00000585428 DIP2BQ9P265 1576 aa25.18■■□□□ 1.62
SDF2-202ENST00000585428 TNIKQ9UKE5 1360 aa25.17■■□□□ 1.62
SDF2-202ENST00000585428 CARMIL2Q6F5E8 1435 aa25.15■■□□□ 1.62
SDF2-202ENST00000585428 TTBK1Q5TCY1 1321 aaPredicted RBP25.14■■□□□ 1.62
SDF2-202ENST00000585428 ABCC2Q92887 1545 aa25.07■■□□□ 1.6
SDF2-202ENST00000585428 IQGAP2Q13576 1575 aa25.04■■□□□ 1.6
SDF2-202ENST00000585428 UHRF1BP1LA0JNW5 1464 aa25.03■■□□□ 1.6
SDF2-202ENST00000585428 DISP1Q96F81 1524 aa25.03■■□□□ 1.6
SDF2-202ENST00000585428 KDM4FA0A1W2PPD8 638 aa25.02■■□□□ 1.6
SDF2-202ENST00000585428 ASXL2Q76L83 1435 aa25.02■■□□□ 1.6
SDF2-202ENST00000585428 UACAQ9BZF9 1416 aa25.02■■□□□ 1.6
SDF2-202ENST00000585428 RAPGEF2Q9Y4G8 1499 aa25.02■■□□□ 1.6
SDF2-202ENST00000585428 PLB1Q6P1J6 1458 aa25.01■■□□□ 1.59
SDF2-202ENST00000585428 KDM6BO15054 1643 aa24.97■■□□□ 1.59
SDF2-202ENST00000585428 UGGT2Q9NYU1 1516 aa24.95■■□□□ 1.58
SDF2-202ENST00000585428 GLI2P10070 1586 aa24.93■■□□□ 1.58
SDF2-202ENST00000585428 TSPOAP1O95153 1857 aa24.92■■□□□ 1.58
SDF2-202ENST00000585428 KDM5BQ9UGL1 1544 aa24.91■■□□□ 1.58
SDF2-202ENST00000585428 EPRSP07814 1512 aaKnown RBP24.86■■□□□ 1.57
SDF2-202ENST00000585428 COL17A1Q9UMD9 1497 aaPredicted RBP24.83■■□□□ 1.56
SDF2-202ENST00000585428 PPRC1Q5VV67 1664 aaKnown RBP24.81■■□□□ 1.56
SDF2-202ENST00000585428 KIAA0556O60303 1618 aa24.81■■□□□ 1.56
SDF2-202ENST00000585428 PRXQ9BXM0 1461 aa24.75■■□□□ 1.55
SDF2-202ENST00000585428 ZCCHC11Q5TAX3 1644 aaKnown RBP24.75■■□□□ 1.55
SDF2-202ENST00000585428 MAP3K4Q9Y6R4 1608 aa24.73■■□□□ 1.55
SDF2-202ENST00000585428 GOLGA3Q08378 1498 aa24.72■■□□□ 1.55
SDF2-202ENST00000585428 TEX14Q8IWB6 1497 aa24.71■■□□□ 1.55
SDF2-202ENST00000585428 WDR7Q9Y4E6 1490 aa24.71■■□□□ 1.55
SDF2-202ENST00000585428 KCNH8Q96L42 1107 aa24.69■■□□□ 1.54
SDF2-202ENST00000585428 ABCA8O94911 1581 aa24.65■■□□□ 1.54
SDF2-202ENST00000585428 CD109Q6YHK3 1445 aa24.64■■□□□ 1.54
SDF2-202ENST00000585428 ADGRL1O94910 1474 aa24.63■■□□□ 1.53
SDF2-202ENST00000585428 CTTNBP2Q8WZ74 1663 aa24.62■■□□□ 1.53
SDF2-202ENST00000585428 MAGI3Q5TCQ9 1506 aa24.61■■□□□ 1.53
SDF2-202ENST00000585428 CSRNP3Q8WYN3 585 aa24.6■■□□□ 1.53
SDF2-202ENST00000585428 P3H3Q8IVL6 736 aa24.59■■□□□ 1.53
SDF2-202ENST00000585428 FAM9AQ8IZU1 332 aaPredicted RBP24.59■■□□□ 1.53
SDF2-202ENST00000585428 ATP10BO94823 1461 aa24.53■■□□□ 1.52
SDF2-202ENST00000585428 ARID3CA6NKF2 412 aa24.51■■□□□ 1.51
SDF2-202ENST00000585428 CFAP43Q8NDM7 1665 aa24.49■■□□□ 1.51
SDF2-202ENST00000585428 ARAP3Q8WWN8 1544 aa24.43■■□□□ 1.5
SDF2-202ENST00000585428 PHLDB1Q86UU1 1377 aa24.42■■□□□ 1.5
SDF2-202ENST00000585428 ILDR1Q86SU0 546 aaPredicted RBP24.38■■□□□ 1.49
SDF2-202ENST00000585428 SAMD9Q5K651 1589 aa24.37■■□□□ 1.49
SDF2-202ENST00000585428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.36■■□□□ 1.49
SDF2-202ENST00000585428 HNRNPUL2Q1KMD3 747 aaKnown RBP24.36■■□□□ 1.49
SDF2-202ENST00000585428 EEA1Q15075 1411 aa24.35■■□□□ 1.49
SDF2-202ENST00000585428 RAPGEF3O95398 923 aa24.34■■□□□ 1.49
SDF2-202ENST00000585428 RANGAP1P46060 587 aaPredicted RBP24.33■■□□□ 1.49
SDF2-202ENST00000585428 ABCA9Q8IUA7 1624 aa24.32■■□□□ 1.48
SDF2-202ENST00000585428 RAPGEF6Q8TEU7 1601 aa24.3■■□□□ 1.48
SDF2-202ENST00000585428 NUP153P49790 1475 aaKnown RBP24.3■■□□□ 1.48
SDF2-202ENST00000585428 HECW2Q9P2P5 1572 aa24.29■■□□□ 1.48
SDF2-202ENST00000585428 PLEKHD1A6NEE1 506 aa24.29■■□□□ 1.48
SDF2-202ENST00000585428 NEO1Q92859 1461 aa24.28■■□□□ 1.48
SDF2-202ENST00000585428 FHOD3Q2V2M9 1422 aa24.26■■□□□ 1.47
SDF2-202ENST00000585428 KIF21BO75037 1637 aa24.21■■□□□ 1.47
SDF2-202ENST00000585428 PTPRMP28827 1452 aa24.14■■□□□ 1.46
SDF2-202ENST00000585428 AKNAQ7Z591 1439 aa24.13■■□□□ 1.45
SDF2-202ENST00000585428 ARID4BQ4LE39 1312 aaPredicted RBP24.12■■□□□ 1.45
SDF2-202ENST00000585428 ADAMTSL3P82987 1691 aa24.12■■□□□ 1.45
SDF2-202ENST00000585428 FRMPD1Q5SYB0 1578 aa24.12■■□□□ 1.45
SDF2-202ENST00000585428 DENND4BO75064 1496 aaPredicted RBP24.11■■□□□ 1.45
SDF2-202ENST00000585428 EFCAB5A4FU69 1503 aa24.1■■□□□ 1.45
SDF2-202ENST00000585428 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.09■■□□□ 1.45
SDF2-202ENST00000585428 FANCAO15360 1455 aa24.08■■□□□ 1.45
SDF2-202ENST00000585428 UBTFP17480 764 aaKnown RBP24.06■■□□□ 1.44
SDF2-202ENST00000585428 PLCH2O75038 1416 aa24.01■■□□□ 1.43
SDF2-202ENST00000585428 BCORL1Q5H9F3 1711 aa24.01■■□□□ 1.43
SDF2-202ENST00000585428 EHMT2Q96KQ7 1210 aa24.01■■□□□ 1.43
SDF2-202ENST00000585428 CDK13Q14004 1512 aaKnown RBP23.99■■□□□ 1.43
SDF2-202ENST00000585428 ATP1B4Q9UN42 357 aaPredicted RBP23.98■■□□□ 1.43
SDF2-202ENST00000585428 RICTORQ6R327 1708 aa23.98■■□□□ 1.43
SDF2-202ENST00000585428 FMN1Q68DA7 1419 aa23.97■■□□□ 1.43
SDF2-202ENST00000585428 TTC37Q6PGP7 1564 aa23.97■■□□□ 1.43
SDF2-202ENST00000585428 MAGI2Q86UL8 1455 aa23.96■■□□□ 1.43
SDF2-202ENST00000585428 SCAPERQ9BY12 1400 aa23.96■■□□□ 1.43
SDF2-202ENST00000585428 YEATS2Q9ULM3 1422 aa23.96■■□□□ 1.43
SDF2-202ENST00000585428 CDK11AQ9UQ88 783 aaPredicted RBP23.96■■□□□ 1.43
SDF2-202ENST00000585428 ARHGEF40Q8TER5 1519 aa23.95■■□□□ 1.43
SDF2-202ENST00000585428 EFCAB2Q5VUJ9 269 aa23.95■■□□□ 1.42
SDF2-202ENST00000585428 MADDQ8WXG6 1647 aa23.95■■□□□ 1.42
SDF2-202ENST00000585428 ARHGAP35Q9NRY4 1499 aa23.94■■□□□ 1.42
SDF2-202ENST00000585428 CFAP74Q9C0B2 1584 aa23.94■■□□□ 1.42
SDF2-202ENST00000585428 ZMYM4Q5VZL5 1548 aa23.94■■□□□ 1.42
SDF2-202ENST00000585428 FBXO41Q8TF61 875 aa23.93■■□□□ 1.42
SDF2-202ENST00000585428 POGZQ7Z3K3 1410 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms