RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 IGF1RP08069 1367 aa26.28■■□□□ 1.8
VAPA-209ENST00000585042 KIF27Q86VH2 1401 aa26.27■■□□□ 1.8
VAPA-209ENST00000585042 RUSC2Q8N2Y8 1516 aa26.24■■□□□ 1.79
VAPA-209ENST00000585042 KIAA0586Q9BVV6 1533 aa26.2■■□□□ 1.79
VAPA-209ENST00000585042 CUL7Q14999 1698 aa26.19■■□□□ 1.78
VAPA-209ENST00000585042 NPM1P06748 294 aaKnown RBP eCLIP26.15■■□□□ 1.78
VAPA-209ENST00000585042 CARMIL1Q5VZK9 1371 aa26.09■■□□□ 1.77
VAPA-209ENST00000585042 KIF13AQ9H1H9 1805 aa26.06■■□□□ 1.76
VAPA-209ENST00000585042 MAPKBP1O60336 1514 aa26.04■■□□□ 1.76
VAPA-209ENST00000585042 ABCC10Q5T3U5 1492 aa26.03■■□□□ 1.76
VAPA-209ENST00000585042 FAM69CQ0P6D2 419 aa26■■□□□ 1.75
VAPA-209ENST00000585042 ADCY10Q96PN6 1610 aa25.99■■□□□ 1.75
VAPA-209ENST00000585042 PTPRGP23470 1445 aa25.97■■□□□ 1.75
VAPA-209ENST00000585042 CARMIL2Q6F5E8 1435 aa25.96■■□□□ 1.75
VAPA-209ENST00000585042 TNIKQ9UKE5 1360 aa25.92■■□□□ 1.74
VAPA-209ENST00000585042 DIP2BQ9P265 1576 aa25.89■■□□□ 1.73
VAPA-209ENST00000585042 IQGAP2Q13576 1575 aa25.88■■□□□ 1.73
VAPA-209ENST00000585042 RAPGEF2Q9Y4G8 1499 aa25.84■■□□□ 1.73
VAPA-209ENST00000585042 ABCC2Q92887 1545 aa25.81■■□□□ 1.72
VAPA-209ENST00000585042 UHRF1BP1LA0JNW5 1464 aa25.79■■□□□ 1.72
VAPA-209ENST00000585042 TTBK1Q5TCY1 1321 aaPredicted RBP25.77■■□□□ 1.72
VAPA-209ENST00000585042 DISP1Q96F81 1524 aa25.77■■□□□ 1.72
VAPA-209ENST00000585042 UACAQ9BZF9 1416 aa25.76■■□□□ 1.71
VAPA-209ENST00000585042 UGGT2Q9NYU1 1516 aa25.76■■□□□ 1.71
VAPA-209ENST00000585042 PLB1Q6P1J6 1458 aa25.75■■□□□ 1.71
VAPA-209ENST00000585042 ASXL2Q76L83 1435 aa25.71■■□□□ 1.71
VAPA-209ENST00000585042 KDM6BO15054 1643 aa25.68■■□□□ 1.7
VAPA-209ENST00000585042 GLI2P10070 1586 aa25.68■■□□□ 1.7
VAPA-209ENST00000585042 TSPOAP1O95153 1857 aa25.66■■□□□ 1.7
VAPA-209ENST00000585042 KDM5BQ9UGL1 1544 aa25.66■■□□□ 1.7
VAPA-209ENST00000585042 KIAA0556O60303 1618 aa25.63■■□□□ 1.69
VAPA-209ENST00000585042 GOLGA3Q08378 1498 aa25.59■■□□□ 1.69
VAPA-209ENST00000585042 PRXQ9BXM0 1461 aa25.57■■□□□ 1.68
VAPA-209ENST00000585042 CTTNBP2Q8WZ74 1663 aa25.56■■□□□ 1.68
VAPA-209ENST00000585042 EPRSP07814 1512 aaKnown RBP25.55■■□□□ 1.68
VAPA-209ENST00000585042 ZCCHC11Q5TAX3 1644 aaKnown RBP25.52■■□□□ 1.68
VAPA-209ENST00000585042 PPRC1Q5VV67 1664 aaKnown RBP25.52■■□□□ 1.68
VAPA-209ENST00000585042 KDM4FA0A1W2PPD8 638 aa25.49■■□□□ 1.67
VAPA-209ENST00000585042 MAP3K4Q9Y6R4 1608 aa25.48■■□□□ 1.67
VAPA-209ENST00000585042 TEX14Q8IWB6 1497 aa25.47■■□□□ 1.67
VAPA-209ENST00000585042 FAM9AQ8IZU1 332 aaPredicted RBP25.47■■□□□ 1.67
VAPA-209ENST00000585042 WDR7Q9Y4E6 1490 aa25.46■■□□□ 1.67
VAPA-209ENST00000585042 ABCA8O94911 1581 aa25.43■■□□□ 1.66
VAPA-209ENST00000585042 CSRNP3Q8WYN3 585 aa25.4■■□□□ 1.66
VAPA-209ENST00000585042 COL17A1Q9UMD9 1497 aaPredicted RBP25.38■■□□□ 1.65
VAPA-209ENST00000585042 MAGI3Q5TCQ9 1506 aa25.33■■□□□ 1.65
VAPA-209ENST00000585042 CD109Q6YHK3 1445 aa25.33■■□□□ 1.65
VAPA-209ENST00000585042 KCNH8Q96L42 1107 aa25.32■■□□□ 1.64
VAPA-209ENST00000585042 CFAP43Q8NDM7 1665 aa25.31■■□□□ 1.64
VAPA-209ENST00000585042 EEA1Q15075 1411 aa25.3■■□□□ 1.64
VAPA-209ENST00000585042 P3H3Q8IVL6 736 aa25.25■■□□□ 1.63
VAPA-209ENST00000585042 ATP10BO94823 1461 aa25.24■■□□□ 1.63
VAPA-209ENST00000585042 ADGRL1O94910 1474 aa25.23■■□□□ 1.63
VAPA-209ENST00000585042 SAMD9Q5K651 1589 aa25.22■■□□□ 1.63
VAPA-209ENST00000585042 PHLDB1Q86UU1 1377 aa25.18■■□□□ 1.62
VAPA-209ENST00000585042 ARAP3Q8WWN8 1544 aa25.15■■□□□ 1.62
VAPA-209ENST00000585042 RAPGEF6Q8TEU7 1601 aa25.13■■□□□ 1.61
VAPA-209ENST00000585042 ARID3CA6NKF2 412 aa25.12■■□□□ 1.61
VAPA-209ENST00000585042 ABCA9Q8IUA7 1624 aa25.11■■□□□ 1.61
VAPA-209ENST00000585042 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.07■■□□□ 1.6
VAPA-209ENST00000585042 HNRNPUL2Q1KMD3 747 aaKnown RBP25.07■■□□□ 1.6
VAPA-209ENST00000585042 NUP153P49790 1475 aaKnown RBP25.04■■□□□ 1.6
VAPA-209ENST00000585042 NEO1Q92859 1461 aa25.02■■□□□ 1.6
VAPA-209ENST00000585042 PLEKHD1A6NEE1 506 aa25.02■■□□□ 1.6
VAPA-209ENST00000585042 KIF21BO75037 1637 aa25.01■■□□□ 1.59
VAPA-209ENST00000585042 FHOD3Q2V2M9 1422 aa25.01■■□□□ 1.59
VAPA-209ENST00000585042 RANGAP1P46060 587 aaPredicted RBP25■■□□□ 1.59
VAPA-209ENST00000585042 EFCAB5A4FU69 1503 aa25■■□□□ 1.59
VAPA-209ENST00000585042 RAPGEF3O95398 923 aa24.93■■□□□ 1.58
VAPA-209ENST00000585042 HECW2Q9P2P5 1572 aa24.88■■□□□ 1.57
VAPA-209ENST00000585042 UBTFP17480 764 aaKnown RBP24.86■■□□□ 1.57
VAPA-209ENST00000585042 AKNAQ7Z591 1439 aa24.83■■□□□ 1.57
VAPA-209ENST00000585042 DENND4BO75064 1496 aaPredicted RBP24.83■■□□□ 1.56
VAPA-209ENST00000585042 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.82■■□□□ 1.562e-8■■■■□ 23.9
VAPA-209ENST00000585042 FMN1Q68DA7 1419 aa24.82■■□□□ 1.56
VAPA-209ENST00000585042 CFAP74Q9C0B2 1584 aa24.82■■□□□ 1.56
VAPA-209ENST00000585042 FANCAO15360 1455 aa24.82■■□□□ 1.56
VAPA-209ENST00000585042 FRMPD1Q5SYB0 1578 aa24.81■■□□□ 1.56
VAPA-209ENST00000585042 ADAMTSL3P82987 1691 aa24.79■■□□□ 1.56
VAPA-209ENST00000585042 CDK11AQ9UQ88 783 aaPredicted RBP24.77■■□□□ 1.56
VAPA-209ENST00000585042 PTPRMP28827 1452 aa24.76■■□□□ 1.55
VAPA-209ENST00000585042 RICTORQ6R327 1708 aa24.75■■□□□ 1.55
VAPA-209ENST00000585042 ARID4BQ4LE39 1312 aaPredicted RBP24.75■■□□□ 1.55
VAPA-209ENST00000585042 PLCH2O75038 1416 aa24.74■■□□□ 1.55
VAPA-209ENST00000585042 ARHGAP35Q9NRY4 1499 aa24.74■■□□□ 1.55
VAPA-209ENST00000585042 CDK13Q14004 1512 aaKnown RBP24.74■■□□□ 1.55
VAPA-209ENST00000585042 TTC37Q6PGP7 1564 aa24.73■■□□□ 1.55
VAPA-209ENST00000585042 ILDR1Q86SU0 546 aaPredicted RBP24.73■■□□□ 1.55
VAPA-209ENST00000585042 BCORL1Q5H9F3 1711 aa24.72■■□□□ 1.55
VAPA-209ENST00000585042 MAGI2Q86UL8 1455 aa24.71■■□□□ 1.55
VAPA-209ENST00000585042 HECW1Q76N89 1606 aa24.71■■□□□ 1.55
VAPA-209ENST00000585042 ARHGEF40Q8TER5 1519 aa24.71■■□□□ 1.55
VAPA-209ENST00000585042 ATP1B4Q9UN42 357 aaPredicted RBP24.7■■□□□ 1.54
VAPA-209ENST00000585042 ZMYM4Q5VZL5 1548 aa24.7■■□□□ 1.54
VAPA-209ENST00000585042 EHMT2Q96KQ7 1210 aa24.69■■□□□ 1.54
VAPA-209ENST00000585042 EFCAB2Q5VUJ9 269 aa24.67■■□□□ 1.54
VAPA-209ENST00000585042 POGZQ7Z3K3 1410 aa24.66■■□□□ 1.54
VAPA-209ENST00000585042 SCAPERQ9BY12 1400 aa24.65■■□□□ 1.54
VAPA-209ENST00000585042 ZFYVE16Q7Z3T8 1539 aa24.62■■□□□ 1.53
VAPA-209ENST00000585042 MADDQ8WXG6 1647 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms