RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 FAM69CQ0P6D2 419 aa22.98■■□□□ 1.27
CDK5RAP3-234ENST00000584525 IGF1RP08069 1367 aa22.91■■□□□ 1.26
CDK5RAP3-234ENST00000584525 RUSC2Q8N2Y8 1516 aa22.91■■□□□ 1.26
CDK5RAP3-234ENST00000584525 ABCC10Q5T3U5 1492 aa22.88■■□□□ 1.25
CDK5RAP3-234ENST00000584525 KIF27Q86VH2 1401 aa22.87■■□□□ 1.25
CDK5RAP3-234ENST00000584525 KIAA0586Q9BVV6 1533 aa22.87■■□□□ 1.25
CDK5RAP3-234ENST00000584525 KIF13AQ9H1H9 1805 aa22.82■■□□□ 1.24
CDK5RAP3-234ENST00000584525 MAPKBP1O60336 1514 aa22.82■■□□□ 1.24
CDK5RAP3-234ENST00000584525 TTBK1Q5TCY1 1321 aaPredicted RBP22.81■■□□□ 1.24
CDK5RAP3-234ENST00000584525 ADCY10Q96PN6 1610 aa22.79■■□□□ 1.24
CDK5RAP3-234ENST00000584525 PTPRGP23470 1445 aa22.76■■□□□ 1.23
CDK5RAP3-234ENST00000584525 CARMIL1Q5VZK9 1371 aa22.76■■□□□ 1.23
CDK5RAP3-234ENST00000584525 DIP2BQ9P265 1576 aa22.74■■□□□ 1.23
CDK5RAP3-234ENST00000584525 CUL7Q14999 1698 aa22.72■■□□□ 1.23
CDK5RAP3-234ENST00000584525 CARMIL2Q6F5E8 1435 aa22.69■■□□□ 1.22
CDK5RAP3-234ENST00000584525 TNIKQ9UKE5 1360 aa22.68■■□□□ 1.22
CDK5RAP3-234ENST00000584525 KDM4FA0A1W2PPD8 638 aa22.63■■□□□ 1.21
CDK5RAP3-234ENST00000584525 KDM6BO15054 1643 aa22.63■■□□□ 1.21
CDK5RAP3-234ENST00000584525 ABCC2Q92887 1545 aa22.6■■□□□ 1.21
CDK5RAP3-234ENST00000584525 ASXL2Q76L83 1435 aa22.58■■□□□ 1.21
CDK5RAP3-234ENST00000584525 PLB1Q6P1J6 1458 aa22.56■■□□□ 1.2
CDK5RAP3-234ENST00000584525 IQGAP2Q13576 1575 aa22.55■■□□□ 1.2
CDK5RAP3-234ENST00000584525 UACAQ9BZF9 1416 aa22.55■■□□□ 1.2
CDK5RAP3-234ENST00000584525 TSPOAP1O95153 1857 aa22.53■■□□□ 1.2
CDK5RAP3-234ENST00000584525 UHRF1BP1LA0JNW5 1464 aa22.52■■□□□ 1.2
CDK5RAP3-234ENST00000584525 DISP1Q96F81 1524 aa22.5■■□□□ 1.19
CDK5RAP3-234ENST00000584525 RAPGEF2Q9Y4G8 1499 aa22.48■■□□□ 1.19
CDK5RAP3-234ENST00000584525 GLI2P10070 1586 aa22.46■■□□□ 1.19
CDK5RAP3-234ENST00000584525 EPRSP07814 1512 aaKnown RBP22.41■■□□□ 1.18
CDK5RAP3-234ENST00000584525 UGGT2Q9NYU1 1516 aa22.41■■□□□ 1.18
CDK5RAP3-234ENST00000584525 KDM5BQ9UGL1 1544 aa22.41■■□□□ 1.18
CDK5RAP3-234ENST00000584525 COL17A1Q9UMD9 1497 aaPredicted RBP22.37■■□□□ 1.17
CDK5RAP3-234ENST00000584525 PPRC1Q5VV67 1664 aaKnown RBP22.35■■□□□ 1.17
CDK5RAP3-234ENST00000584525 TEX14Q8IWB6 1497 aa22.34■■□□□ 1.17
CDK5RAP3-234ENST00000584525 KIAA0556O60303 1618 aa22.34■■□□□ 1.17
CDK5RAP3-234ENST00000584525 ADGRL1O94910 1474 aa22.33■■□□□ 1.16
CDK5RAP3-234ENST00000584525 ZCCHC11Q5TAX3 1644 aaKnown RBP22.31■■□□□ 1.16
CDK5RAP3-234ENST00000584525 KCNH8Q96L42 1107 aa22.3■■□□□ 1.16
CDK5RAP3-234ENST00000584525 WDR7Q9Y4E6 1490 aa22.29■■□□□ 1.16
CDK5RAP3-234ENST00000584525 MAP3K4Q9Y6R4 1608 aa22.28■■□□□ 1.16
CDK5RAP3-234ENST00000584525 GOLGA3Q08378 1498 aa22.26■■□□□ 1.15
CDK5RAP3-234ENST00000584525 CD109Q6YHK3 1445 aa22.23■■□□□ 1.15
CDK5RAP3-234ENST00000584525 FAM9AQ8IZU1 332 aaPredicted RBP22.21■■□□□ 1.15
CDK5RAP3-234ENST00000584525 ILDR1Q86SU0 546 aaPredicted RBP22.2■■□□□ 1.14
CDK5RAP3-234ENST00000584525 ARID3CA6NKF2 412 aa22.19■■□□□ 1.14
CDK5RAP3-234ENST00000584525 PRXQ9BXM0 1461 aa22.17■■□□□ 1.14
CDK5RAP3-234ENST00000584525 P3H3Q8IVL6 736 aa22.17■■□□□ 1.14
CDK5RAP3-234ENST00000584525 ABCA8O94911 1581 aa22.16■■□□□ 1.14
CDK5RAP3-234ENST00000584525 MAGI3Q5TCQ9 1506 aa22.16■■□□□ 1.14
CDK5RAP3-234ENST00000584525 CTTNBP2Q8WZ74 1663 aa22.12■■□□□ 1.13
CDK5RAP3-234ENST00000584525 CFAP43Q8NDM7 1665 aa22.06■■□□□ 1.12
CDK5RAP3-234ENST00000584525 HECW2Q9P2P5 1572 aa22.05■■□□□ 1.12
CDK5RAP3-234ENST00000584525 ATP10BO94823 1461 aa22.05■■□□□ 1.12
CDK5RAP3-234ENST00000584525 CSRNP3Q8WYN3 585 aa22.04■■□□□ 1.12
CDK5RAP3-234ENST00000584525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.03■■□□□ 1.12
CDK5RAP3-234ENST00000584525 HNRNPUL2Q1KMD3 747 aaKnown RBP22.03■■□□□ 1.12
CDK5RAP3-234ENST00000584525 ARAP3Q8WWN8 1544 aa22■■□□□ 1.11
CDK5RAP3-234ENST00000584525 RANGAP1P46060 587 aaPredicted RBP21.99■■□□□ 1.11
CDK5RAP3-234ENST00000584525 RAPGEF3O95398 923 aa21.98■■□□□ 1.11
CDK5RAP3-234ENST00000584525 PHLDB1Q86UU1 1377 aa21.97■■□□□ 1.11
CDK5RAP3-234ENST00000584525 KIF21BO75037 1637 aa21.91■■□□□ 1.1
CDK5RAP3-234ENST00000584525 ARID4BQ4LE39 1312 aaPredicted RBP21.89■■□□□ 1.1
CDK5RAP3-234ENST00000584525 ABCA9Q8IUA7 1624 aa21.88■■□□□ 1.09
CDK5RAP3-234ENST00000584525 NEO1Q92859 1461 aa21.88■■□□□ 1.09
CDK5RAP3-234ENST00000584525 SAMD9Q5K651 1589 aa21.87■■□□□ 1.09
CDK5RAP3-234ENST00000584525 PLEKHD1A6NEE1 506 aa21.87■■□□□ 1.09
CDK5RAP3-234ENST00000584525 RAPGEF6Q8TEU7 1601 aa21.86■■□□□ 1.09
CDK5RAP3-234ENST00000584525 FHOD3Q2V2M9 1422 aa21.85■■□□□ 1.09
CDK5RAP3-234ENST00000584525 NUP153P49790 1475 aaKnown RBP21.84■■□□□ 1.09
CDK5RAP3-234ENST00000584525 PTPRMP28827 1452 aa21.83■■□□□ 1.09
CDK5RAP3-234ENST00000584525 EEA1Q15075 1411 aa21.81■■□□□ 1.08
CDK5RAP3-234ENST00000584525 DENND4BO75064 1496 aaPredicted RBP21.76■■□□□ 1.07
CDK5RAP3-234ENST00000584525 ADAMTSL3P82987 1691 aa21.75■■□□□ 1.07
CDK5RAP3-234ENST00000584525 AKNAQ7Z591 1439 aa21.74■■□□□ 1.07
CDK5RAP3-234ENST00000584525 FBXO41Q8TF61 875 aa21.74■■□□□ 1.07
CDK5RAP3-234ENST00000584525 FRMPD1Q5SYB0 1578 aa21.74■■□□□ 1.07
CDK5RAP3-234ENST00000584525 FANCAO15360 1455 aa21.71■■□□□ 1.07
CDK5RAP3-234ENST00000584525 PLPPR3Q6T4P5 718 aa21.71■■□□□ 1.07
CDK5RAP3-234ENST00000584525 EHMT2Q96KQ7 1210 aa21.69■■□□□ 1.06
CDK5RAP3-234ENST00000584525 ATP1B4Q9UN42 357 aaPredicted RBP21.68■■□□□ 1.06
CDK5RAP3-234ENST00000584525 BCORL1Q5H9F3 1711 aa21.67■■□□□ 1.06
CDK5RAP3-234ENST00000584525 MADDQ8WXG6 1647 aa21.66■■□□□ 1.06
CDK5RAP3-234ENST00000584525 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.66■■□□□ 1.06
CDK5RAP3-234ENST00000584525 EFCAB5A4FU69 1503 aa21.65■■□□□ 1.06
CDK5RAP3-234ENST00000584525 ARHGEF40Q8TER5 1519 aa21.65■■□□□ 1.06
CDK5RAP3-234ENST00000584525 POGZQ7Z3K3 1410 aa21.65■■□□□ 1.06
CDK5RAP3-234ENST00000584525 UBTFP17480 764 aaKnown RBP21.65■■□□□ 1.06
CDK5RAP3-234ENST00000584525 MLECQ14165 292 aa21.64■■□□□ 1.05
CDK5RAP3-234ENST00000584525 CHIC1Q5VXU3 224 aa21.64■■□□□ 1.05
CDK5RAP3-234ENST00000584525 PCF11O94913 1555 aaKnown RBP21.63■■□□□ 1.05
CDK5RAP3-234ENST00000584525 LMTK3Q96Q04 1460 aa21.63■■□□□ 1.05
CDK5RAP3-234ENST00000584525 YEATS2Q9ULM3 1422 aa21.62■■□□□ 1.05
CDK5RAP3-234ENST00000584525 CDK13Q14004 1512 aaKnown RBP21.61■■□□□ 1.05
CDK5RAP3-234ENST00000584525 HSPA2P54652 639 aa21.61■■□□□ 1.05
CDK5RAP3-234ENST00000584525 CFAP74Q9C0B2 1584 aa21.61■■□□□ 1.05
CDK5RAP3-234ENST00000584525 SCAPERQ9BY12 1400 aa21.6■■□□□ 1.05
CDK5RAP3-234ENST00000584525 TTC37Q6PGP7 1564 aa21.6■■□□□ 1.05
CDK5RAP3-234ENST00000584525 PLCH2O75038 1416 aa21.59■■□□□ 1.05
CDK5RAP3-234ENST00000584525 ZFYVE16Q7Z3T8 1539 aa21.59■■□□□ 1.05
CDK5RAP3-234ENST00000584525 MAGI2Q86UL8 1455 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 525.2 ms