RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 KDM4FA0A1W2PPD8 638 aa20.21■□□□□ 0.83
CASC3-208ENST00000583649 MAPKBP1O60336 1514 aa20.19■□□□□ 0.82
CASC3-208ENST00000583649 KDM6BO15054 1643 aa20.19■□□□□ 0.82
CASC3-208ENST00000583649 ERICH3Q5RHP9 1530 aa20.17■□□□□ 0.82
CASC3-208ENST00000583649 DIP2BQ9P265 1576 aa20.12■□□□□ 0.81
CASC3-208ENST00000583649 TOP2BQ02880 1626 aa20.05■□□□□ 0.8
CASC3-208ENST00000583649 ADCY10Q96PN6 1610 aa20.02■□□□□ 0.79
CASC3-208ENST00000583649 BIVM-ERCC5R4GMW8 1640 aa20.02■□□□□ 0.79
CASC3-208ENST00000583649 RUSC2Q8N2Y8 1516 aa20■□□□□ 0.79
CASC3-208ENST00000583649 TSPOAP1O95153 1857 aa19.99■□□□□ 0.79
CASC3-208ENST00000583649 ADGRL1O94910 1474 aa19.93■□□□□ 0.78
CASC3-208ENST00000583649 KIAA0586Q9BVV6 1533 aa19.93■□□□□ 0.78
CASC3-208ENST00000583649 PTPRGP23470 1445 aa19.91■□□□□ 0.78
CASC3-208ENST00000583649 PLB1Q6P1J6 1458 aa19.89■□□□□ 0.77
CASC3-208ENST00000583649 CARMIL2Q6F5E8 1435 aa19.86■□□□□ 0.77
CASC3-208ENST00000583649 TTBK1Q5TCY1 1321 aaPredicted RBP19.85■□□□□ 0.77
CASC3-208ENST00000583649 SUPT5HO00267 1087 aaKnown RBP19.85■□□□□ 0.77
CASC3-208ENST00000583649 ABCC2Q92887 1545 aa19.84■□□□□ 0.77
CASC3-208ENST00000583649 GLI2P10070 1586 aa19.83■□□□□ 0.77
CASC3-208ENST00000583649 HECW2Q9P2P5 1572 aa19.83■□□□□ 0.77
CASC3-208ENST00000583649 ASXL2Q76L83 1435 aa19.83■□□□□ 0.76
CASC3-208ENST00000583649 TEX14Q8IWB6 1497 aa19.82■□□□□ 0.76
CASC3-208ENST00000583649 TNIKQ9UKE5 1360 aa19.82■□□□□ 0.76
CASC3-208ENST00000583649 KIF27Q86VH2 1401 aa19.76■□□□□ 0.75
CASC3-208ENST00000583649 CUL7Q14999 1698 aa19.76■□□□□ 0.75
CASC3-208ENST00000583649 FBXO41Q8TF61 875 aa19.76■□□□□ 0.75
CASC3-208ENST00000583649 IGF1RP08069 1367 aa19.74■□□□□ 0.75
CASC3-208ENST00000583649 UHRF1BP1LA0JNW5 1464 aa19.73■□□□□ 0.75
CASC3-208ENST00000583649 UACAQ9BZF9 1416 aa19.71■□□□□ 0.75
CASC3-208ENST00000583649 PPRC1Q5VV67 1664 aaKnown RBP19.71■□□□□ 0.75
CASC3-208ENST00000583649 EPRSP07814 1512 aaKnown RBP19.68■□□□□ 0.74
CASC3-208ENST00000583649 COL17A1Q9UMD9 1497 aaPredicted RBP19.67■□□□□ 0.74
CASC3-208ENST00000583649 MAP3K4Q9Y6R4 1608 aa19.65■□□□□ 0.74
CASC3-208ENST00000583649 CARMIL1Q5VZK9 1371 aa19.65■□□□□ 0.74
CASC3-208ENST00000583649 IQGAP2Q13576 1575 aa19.62■□□□□ 0.73
CASC3-208ENST00000583649 KDM5BQ9UGL1 1544 aa19.62■□□□□ 0.73
CASC3-208ENST00000583649 WDR7Q9Y4E6 1490 aa19.55■□□□□ 0.72
CASC3-208ENST00000583649 CD109Q6YHK3 1445 aa19.53■□□□□ 0.72
CASC3-208ENST00000583649 ZCCHC11Q5TAX3 1644 aaKnown RBP19.53■□□□□ 0.72
CASC3-208ENST00000583649 FAM9AQ8IZU1 332 aaPredicted RBP19.52■□□□□ 0.72
CASC3-208ENST00000583649 MAGI3Q5TCQ9 1506 aa19.51■□□□□ 0.71
CASC3-208ENST00000583649 DISP1Q96F81 1524 aa19.51■□□□□ 0.71
CASC3-208ENST00000583649 KCNH8Q96L42 1107 aa19.48■□□□□ 0.71
CASC3-208ENST00000583649 UGGT2Q9NYU1 1516 aa19.46■□□□□ 0.71
CASC3-208ENST00000583649 CFAP43Q8NDM7 1665 aa19.45■□□□□ 0.7
CASC3-208ENST00000583649 KIAA0556O60303 1618 aa19.41■□□□□ 0.7
CASC3-208ENST00000583649 PHLDB1Q86UU1 1377 aa19.41■□□□□ 0.7
CASC3-208ENST00000583649 PTPRMP28827 1452 aa19.4■□□□□ 0.7
CASC3-208ENST00000583649 RAPGEF2Q9Y4G8 1499 aa19.4■□□□□ 0.7
CASC3-208ENST00000583649 KIF21BO75037 1637 aa19.4■□□□□ 0.7
CASC3-208ENST00000583649 LMTK3Q96Q04 1460 aa19.39■□□□□ 0.69
CASC3-208ENST00000583649 GOLGA3Q08378 1498 aa19.38■□□□□ 0.69
CASC3-208ENST00000583649 ARAP3Q8WWN8 1544 aa19.37■□□□□ 0.69
CASC3-208ENST00000583649 ARID4BQ4LE39 1312 aaPredicted RBP19.36■□□□□ 0.69
CASC3-208ENST00000583649 PCF11O94913 1555 aaKnown RBP19.32■□□□□ 0.68
CASC3-208ENST00000583649 ADAMTSL3P82987 1691 aa19.29■□□□□ 0.68
CASC3-208ENST00000583649 ABCA8O94911 1581 aa19.26■□□□□ 0.67
CASC3-208ENST00000583649 RAPGEF3O95398 923 aa19.23■□□□□ 0.67
CASC3-208ENST00000583649 CERKQ8TCT0 537 aa19.23■□□□□ 0.67
CASC3-208ENST00000583649 NEO1Q92859 1461 aa19.22■□□□□ 0.67
CASC3-208ENST00000583649 BCORL1Q5H9F3 1711 aa19.2■□□□□ 0.66
CASC3-208ENST00000583649 POGZQ7Z3K3 1410 aa19.2■□□□□ 0.66
CASC3-208ENST00000583649 SOCS7O14512 581 aa19.2■□□□□ 0.66
CASC3-208ENST00000583649 DISP3Q9P2K9 1392 aa19.19■□□□□ 0.66
CASC3-208ENST00000583649 CTTNBP2Q8WZ74 1663 aa19.18■□□□□ 0.66
CASC3-208ENST00000583649 MADDQ8WXG6 1647 aa19.18■□□□□ 0.66
CASC3-208ENST00000583649 ARID3CA6NKF2 412 aa19.17■□□□□ 0.66
CASC3-208ENST00000583649 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.17■□□□□ 0.66
CASC3-208ENST00000583649 HNRNPUL2Q1KMD3 747 aaKnown RBP19.17■□□□□ 0.66
CASC3-208ENST00000583649 ABCA9Q8IUA7 1624 aa19.16■□□□□ 0.66
CASC3-208ENST00000583649 HSPA2P54652 639 aa19.15■□□□□ 0.66
CASC3-208ENST00000583649 PLPPR3Q6T4P5 718 aa19.14■□□□□ 0.65
CASC3-208ENST00000583649 ATP10BO94823 1461 aa19.13■□□□□ 0.65
CASC3-208ENST00000583649 DMRT2Q9Y5R5 561 aa19.12■□□□□ 0.65
CASC3-208ENST00000583649 FANCAO15360 1455 aa19.1■□□□□ 0.65
CASC3-208ENST00000583649 RIMS1Q86UR5 1692 aaKnown RBP19.1■□□□□ 0.65
CASC3-208ENST00000583649 DENND4BO75064 1496 aaPredicted RBP19.09■□□□□ 0.65
CASC3-208ENST00000583649 AKNAQ7Z591 1439 aa19.08■□□□□ 0.65
CASC3-208ENST00000583649 ARHGEF40Q8TER5 1519 aa19.07■□□□□ 0.64
CASC3-208ENST00000583649 P3H3Q8IVL6 736 aa19.06■□□□□ 0.64
CASC3-208ENST00000583649 ILDR2Q71H61 639 aa19.04■□□□□ 0.64
CASC3-208ENST00000583649 FRMPD1Q5SYB0 1578 aa19.03■□□□□ 0.64
CASC3-208ENST00000583649 PLEKHD1A6NEE1 506 aa19.03■□□□□ 0.64
CASC3-208ENST00000583649 CFAP74Q9C0B2 1584 aa19.02■□□□□ 0.63
CASC3-208ENST00000583649 FHOD3Q2V2M9 1422 aa19.01■□□□□ 0.63
CASC3-208ENST00000583649 EFCAB5A4FU69 1503 aa19■□□□□ 0.63
CASC3-208ENST00000583649 MAGI2Q86UL8 1455 aa19■□□□□ 0.63
CASC3-208ENST00000583649 MLECQ14165 292 aa18.99■□□□□ 0.63
CASC3-208ENST00000583649 YEATS2Q9ULM3 1422 aa18.98■□□□□ 0.63
CASC3-208ENST00000583649 ZFYVE16Q7Z3T8 1539 aa18.97■□□□□ 0.63
CASC3-208ENST00000583649 PRXQ9BXM0 1461 aa18.97■□□□□ 0.63
CASC3-208ENST00000583649 RAPGEF6Q8TEU7 1601 aa18.96■□□□□ 0.63
CASC3-208ENST00000583649 ZMYM4Q5VZL5 1548 aa18.94■□□□□ 0.62
CASC3-208ENST00000583649 RICTORQ6R327 1708 aa18.94■□□□□ 0.62
CASC3-208ENST00000583649 SPATA31D1Q6ZQQ2 1576 aa18.93■□□□□ 0.62
CASC3-208ENST00000583649 TTC37Q6PGP7 1564 aa18.92■□□□□ 0.62
CASC3-208ENST00000583649 FER1L4A9Z1Z3 1794 aa18.91■□□□□ 0.62
CASC3-208ENST00000583649 PREX1Q8TCU6 1659 aa18.89■□□□□ 0.61
CASC3-208ENST00000583649 UHRF1BP1Q6BDS2 1440 aa18.89■□□□□ 0.61
CASC3-208ENST00000583649 NUP153P49790 1475 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms