RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 AEBP2Q6ZN18 517 aaPredicted RBP23.84■■□□□ 1.41
CCDC57-218ENST00000583593 IGF1RP08069 1367 aa23.83■■□□□ 1.41
CCDC57-218ENST00000583593 KIAA0586Q9BVV6 1533 aa23.78■■□□□ 1.4
CCDC57-218ENST00000583593 KIF27Q86VH2 1401 aa23.77■■□□□ 1.4
CCDC57-218ENST00000583593 ADCY10Q96PN6 1610 aa23.76■■□□□ 1.39
CCDC57-218ENST00000583593 CUL7Q14999 1698 aa23.76■■□□□ 1.39
CCDC57-218ENST00000583593 ABCC10Q5T3U5 1492 aa23.74■■□□□ 1.39
CCDC57-218ENST00000583593 MAPKBP1O60336 1514 aa23.73■■□□□ 1.39
CCDC57-218ENST00000583593 FAM69CQ0P6D2 419 aa23.7■■□□□ 1.38
CCDC57-218ENST00000583593 NPM1P06748 294 aaKnown RBP eCLIP23.69■■□□□ 1.38
CCDC57-218ENST00000583593 DIP2BQ9P265 1576 aa23.68■■□□□ 1.38
CCDC57-218ENST00000583593 CARMIL1Q5VZK9 1371 aa23.65■■□□□ 1.38
CCDC57-218ENST00000583593 PTPRGP23470 1445 aa23.57■■□□□ 1.36
CCDC57-218ENST00000583593 TSPOAP1O95153 1857 aa23.52■■□□□ 1.36
CCDC57-218ENST00000583593 IQGAP2Q13576 1575 aa23.52■■□□□ 1.36
CCDC57-218ENST00000583593 TNIKQ9UKE5 1360 aa23.52■■□□□ 1.36
CCDC57-218ENST00000583593 TTBK1Q5TCY1 1321 aaPredicted RBP23.51■■□□□ 1.35
CCDC57-218ENST00000583593 CARMIL2Q6F5E8 1435 aa23.5■■□□□ 1.35
CCDC57-218ENST00000583593 KDM6BO15054 1643 aa23.49■■□□□ 1.35
CCDC57-218ENST00000583593 ABCC2Q92887 1545 aa23.48■■□□□ 1.35
CCDC57-218ENST00000583593 DISP1Q96F81 1524 aa23.46■■□□□ 1.35
CCDC57-218ENST00000583593 UHRF1BP1LA0JNW5 1464 aa23.43■■□□□ 1.34
CCDC57-218ENST00000583593 ASXL2Q76L83 1435 aa23.42■■□□□ 1.34
CCDC57-218ENST00000583593 RAPGEF2Q9Y4G8 1499 aa23.4■■□□□ 1.34
CCDC57-218ENST00000583593 UACAQ9BZF9 1416 aa23.4■■□□□ 1.34
CCDC57-218ENST00000583593 PPRC1Q5VV67 1664 aaKnown RBP23.39■■□□□ 1.34
CCDC57-218ENST00000583593 GLI2P10070 1586 aa23.39■■□□□ 1.33
CCDC57-218ENST00000583593 UGGT2Q9NYU1 1516 aa23.38■■□□□ 1.33
CCDC57-218ENST00000583593 PLB1Q6P1J6 1458 aa23.38■■□□□ 1.33
CCDC57-218ENST00000583593 KDM4FA0A1W2PPD8 638 aa23.37■■□□□ 1.33
CCDC57-218ENST00000583593 KDM5BQ9UGL1 1544 aa23.33■■□□□ 1.33
CCDC57-218ENST00000583593 KIAA0556O60303 1618 aa23.32■■□□□ 1.32
CCDC57-218ENST00000583593 ZCCHC11Q5TAX3 1644 aaKnown RBP23.29■■□□□ 1.32
CCDC57-218ENST00000583593 EPRSP07814 1512 aaKnown RBP23.28■■□□□ 1.32
CCDC57-218ENST00000583593 MAP3K4Q9Y6R4 1608 aa23.26■■□□□ 1.31
CCDC57-218ENST00000583593 COL17A1Q9UMD9 1497 aaPredicted RBP23.24■■□□□ 1.31
CCDC57-218ENST00000583593 CTTNBP2Q8WZ74 1663 aa23.24■■□□□ 1.31
CCDC57-218ENST00000583593 PRXQ9BXM0 1461 aa23.16■■□□□ 1.3
CCDC57-218ENST00000583593 WDR7Q9Y4E6 1490 aa23.15■■□□□ 1.3
CCDC57-218ENST00000583593 TEX14Q8IWB6 1497 aa23.14■■□□□ 1.29
CCDC57-218ENST00000583593 ABCA8O94911 1581 aa23.14■■□□□ 1.29
CCDC57-218ENST00000583593 GOLGA3Q08378 1498 aa23.13■■□□□ 1.29
CCDC57-218ENST00000583593 ADGRL1O94910 1474 aa23.11■■□□□ 1.29
CCDC57-218ENST00000583593 CFAP43Q8NDM7 1665 aa23.04■■□□□ 1.28
CCDC57-218ENST00000583593 MAGI3Q5TCQ9 1506 aa23.03■■□□□ 1.28
CCDC57-218ENST00000583593 CD109Q6YHK3 1445 aa23.03■■□□□ 1.28
CCDC57-218ENST00000583593 KCNH8Q96L42 1107 aa23.03■■□□□ 1.28
CCDC57-218ENST00000583593 P3H3Q8IVL6 736 aa22.96■■□□□ 1.27
CCDC57-218ENST00000583593 ATP10BO94823 1461 aa22.95■■□□□ 1.26
CCDC57-218ENST00000583593 ARID3CA6NKF2 412 aa22.92■■□□□ 1.26
CCDC57-218ENST00000583593 CSRNP3Q8WYN3 585 aa22.91■■□□□ 1.26
CCDC57-218ENST00000583593 SAMD9Q5K651 1589 aa22.91■■□□□ 1.26
CCDC57-218ENST00000583593 ARAP3Q8WWN8 1544 aa22.86■■□□□ 1.25
CCDC57-218ENST00000583593 ABCA9Q8IUA7 1624 aa22.85■■□□□ 1.25
CCDC57-218ENST00000583593 HECW2Q9P2P5 1572 aa22.84■■□□□ 1.25
CCDC57-218ENST00000583593 RAPGEF6Q8TEU7 1601 aa22.84■■□□□ 1.25
CCDC57-218ENST00000583593 KIF21BO75037 1637 aa22.83■■□□□ 1.25
CCDC57-218ENST00000583593 FAM9AQ8IZU1 332 aaPredicted RBP22.82■■□□□ 1.24
CCDC57-218ENST00000583593 ILDR1Q86SU0 546 aaPredicted RBP22.78■■□□□ 1.24
CCDC57-218ENST00000583593 NUP153P49790 1475 aaKnown RBP22.77■■□□□ 1.24
CCDC57-218ENST00000583593 PHLDB1Q86UU1 1377 aa22.76■■□□□ 1.23
CCDC57-218ENST00000583593 EEA1Q15075 1411 aa22.74■■□□□ 1.23
CCDC57-218ENST00000583593 FHOD3Q2V2M9 1422 aa22.74■■□□□ 1.23
CCDC57-218ENST00000583593 RAPGEF3O95398 923 aa22.72■■□□□ 1.23
CCDC57-218ENST00000583593 RANGAP1P46060 587 aaPredicted RBP22.72■■□□□ 1.23
CCDC57-218ENST00000583593 NEO1Q92859 1461 aa22.72■■□□□ 1.23
CCDC57-218ENST00000583593 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.71■■□□□ 1.23
CCDC57-218ENST00000583593 HNRNPUL2Q1KMD3 747 aaKnown RBP22.71■■□□□ 1.23
CCDC57-218ENST00000583593 FRMPD1Q5SYB0 1578 aa22.7■■□□□ 1.22
CCDC57-218ENST00000583593 ADAMTSL3P82987 1691 aa22.68■■□□□ 1.22
CCDC57-218ENST00000583593 PTPRMP28827 1452 aa22.61■■□□□ 1.21
CCDC57-218ENST00000583593 PLEKHD1A6NEE1 506 aa22.61■■□□□ 1.21
CCDC57-218ENST00000583593 EFCAB5A4FU69 1503 aa22.61■■□□□ 1.21
CCDC57-218ENST00000583593 BCORL1Q5H9F3 1711 aa22.6■■□□□ 1.21
CCDC57-218ENST00000583593 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.6■■□□□ 1.21
CCDC57-218ENST00000583593 RICTORQ6R327 1708 aa22.59■■□□□ 1.21
CCDC57-218ENST00000583593 AKNAQ7Z591 1439 aa22.57■■□□□ 1.2
CCDC57-218ENST00000583593 TTC37Q6PGP7 1564 aa22.56■■□□□ 1.2
CCDC57-218ENST00000583593 DENND4BO75064 1496 aaPredicted RBP22.55■■□□□ 1.2
CCDC57-218ENST00000583593 FANCAO15360 1455 aa22.54■■□□□ 1.2
CCDC57-218ENST00000583593 MADDQ8WXG6 1647 aa22.54■■□□□ 1.2
CCDC57-218ENST00000583593 ARHGEF40Q8TER5 1519 aa22.54■■□□□ 1.2
CCDC57-218ENST00000583593 CDK13Q14004 1512 aaKnown RBP22.53■■□□□ 1.2
CCDC57-218ENST00000583593 CFAP74Q9C0B2 1584 aa22.52■■□□□ 1.2
CCDC57-218ENST00000583593 ARID4BQ4LE39 1312 aaPredicted RBP22.51■■□□□ 1.19
CCDC57-218ENST00000583593 SIGLEC1Q9BZZ2 1709 aa22.48■■□□□ 1.19
CCDC57-218ENST00000583593 ZMYM4Q5VZL5 1548 aa22.48■■□□□ 1.19
CCDC57-218ENST00000583593 EHMT2Q96KQ7 1210 aa22.45■■□□□ 1.18
CCDC57-218ENST00000583593 RIMS1Q86UR5 1692 aaKnown RBP22.45■■□□□ 1.18
CCDC57-218ENST00000583593 PLCH2O75038 1416 aa22.44■■□□□ 1.18
CCDC57-218ENST00000583593 YEATS2Q9ULM3 1422 aa22.44■■□□□ 1.18
CCDC57-218ENST00000583593 LMTK3Q96Q04 1460 aa22.43■■□□□ 1.18
CCDC57-218ENST00000583593 ARHGAP35Q9NRY4 1499 aa22.43■■□□□ 1.18
CCDC57-218ENST00000583593 PCF11O94913 1555 aaKnown RBP22.42■■□□□ 1.18
CCDC57-218ENST00000583593 ZFYVE16Q7Z3T8 1539 aa22.42■■□□□ 1.18
CCDC57-218ENST00000583593 HECW1Q76N89 1606 aa22.42■■□□□ 1.18
CCDC57-218ENST00000583593 UBTFP17480 764 aaKnown RBP22.41■■□□□ 1.18
CCDC57-218ENST00000583593 MAGI2Q86UL8 1455 aa22.4■■□□□ 1.18
CCDC57-218ENST00000583593 FMN1Q68DA7 1419 aa22.4■■□□□ 1.18
CCDC57-218ENST00000583593 SCAPERQ9BY12 1400 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms