RNA–Protein interactions for RNA: ENST00000583382.1

CDH8-209, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 1,528 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-209ENST00000583382 PRKAR2AP13861 404 aaKnown RBP9.61□□□□□ -0.87
CDH8-209ENST00000583382 KLHL34Q8N239 644 aa9.61□□□□□ -0.87
CDH8-209ENST00000583382 MNX1P50219 401 aaPredicted RBP9.6□□□□□ -0.87
CDH8-209ENST00000583382 ZBTB47Q9UFB7 747 aaPredicted RBP9.56□□□□□ -0.88
CDH8-209ENST00000583382 SPOCK2Q92563 424 aa9.54□□□□□ -0.88
CDH8-209ENST00000583382 FARP1Q9Y4F1 1045 aaPredicted RBP9.53□□□□□ -0.88
CDH8-209ENST00000583382 NCAPD3P42695 1498 aa9.49□□□□□ -0.89
CDH8-209ENST00000583382 THOC2Q8NI27 1593 aaKnown RBP9.48□□□□□ -0.89
CDH8-209ENST00000583382 NUBP1P53384 320 aa9.48□□□□□ -0.89
CDH8-209ENST00000583382 NPM1P06748 294 aaKnown RBP eCLIP9.47□□□□□ -0.89
CDH8-209ENST00000583382 RTN4Q9NQC3 1192 aaKnown RBP9.47□□□□□ -0.89
CDH8-209ENST00000583382 AMER1Q5JTC6 1135 aaPredicted RBP9.46□□□□□ -0.9
CDH8-209ENST00000583382 NESP48681 1621 aa9.45□□□□□ -0.9
CDH8-209ENST00000583382 RASEFQ8IZ41 740 aa9.43□□□□□ -0.9
CDH8-209ENST00000583382 HMGXB3Q12766 1538 aa9.42□□□□□ -0.9
CDH8-209ENST00000583382 SMARCA2P51531 1590 aa9.39□□□□□ -0.91
CDH8-209ENST00000583382 LAMC3Q9Y6N6 1575 aa9.39□□□□□ -0.91
CDH8-209ENST00000583382 PKD2Q13563 968 aa9.38□□□□□ -0.91
CDH8-209ENST00000583382 POTEHQ6S545 545 aa9.38□□□□□ -0.91
CDH8-209ENST00000583382 CIZ1Q9ULV3 898 aaPredicted RBP9.38□□□□□ -0.91
CDH8-209ENST00000583382 ATAD2BQ9ULI0 1458 aa9.37□□□□□ -0.91
CDH8-209ENST00000583382 DCAF8Q5TAQ9 597 aa9.37□□□□□ -0.91
CDH8-209ENST00000583382 FAM212AQ96EL1 285 aa9.37□□□□□ -0.91
CDH8-209ENST00000583382 KIF21AQ7Z4S6 1674 aa9.36□□□□□ -0.91
CDH8-209ENST00000583382 TSPYL2Q9H2G4 693 aaPredicted RBP9.36□□□□□ -0.91
CDH8-209ENST00000583382 GSE1Q14687 1217 aa9.35□□□□□ -0.91
CDH8-209ENST00000583382 BAZ1AQ9NRL2 1556 aaPredicted RBP9.35□□□□□ -0.91
CDH8-209ENST00000583382 PDS5BQ9NTI5 1447 aa9.34□□□□□ -0.91
CDH8-209ENST00000583382 C19orf67A6NJJ6 358 aa9.33□□□□□ -0.92
CDH8-209ENST00000583382 CD44P16070 742 aaKnown RBP9.33□□□□□ -0.92
CDH8-209ENST00000583382 HAX1O00165 279 aa9.3□□□□□ -0.92
CDH8-209ENST00000583382 PAK3O75914 559 aaPredicted RBP9.3□□□□□ -0.92
CDH8-209ENST00000583382 ZRANB1Q9UGI0 708 aa9.3□□□□□ -0.92
CDH8-209ENST00000583382 BAZ1BQ9UIG0 1483 aaKnown RBP9.29□□□□□ -0.92
CDH8-209ENST00000583382 ECM2O94769 699 aaPredicted RBP9.29□□□□□ -0.92
CDH8-209ENST00000583382 CCDC61Q9Y6R9 512 aa9.29□□□□□ -0.92
CDH8-209ENST00000583382 SMARCA4P51532 1647 aa9.28□□□□□ -0.92
CDH8-209ENST00000583382 PYGBP11216 843 aa9.27□□□□□ -0.93
CDH8-209ENST00000583382 EVX2Q03828 476 aa9.27□□□□□ -0.93
CDH8-209ENST00000583382 MRC2Q9UBG0 1479 aa9.27□□□□□ -0.93
CDH8-209ENST00000583382 WDR62O43379 1518 aa9.26□□□□□ -0.93
CDH8-209ENST00000583382 RIMBP3CA6NJZ7 1639 aa9.24□□□□□ -0.93
CDH8-209ENST00000583382 RIMBP3BA6NNM3 1639 aa9.24□□□□□ -0.93
CDH8-209ENST00000583382 RIMBP3Q9UFD9 1639 aa9.24□□□□□ -0.93
CDH8-209ENST00000583382 CHRM1P11229 460 aaPredicted RBP9.23□□□□□ -0.93
CDH8-209ENST00000583382 RGL2O15211 777 aa9.22□□□□□ -0.93
CDH8-209ENST00000583382 PHF12Q96QT6 1004 aa9.22□□□□□ -0.93
CDH8-209ENST00000583382 PEG3Q9GZU2 1588 aa9.21□□□□□ -0.93
CDH8-209ENST00000583382 ZNF579Q8NAF0 562 aaKnown RBP9.21□□□□□ -0.94
CDH8-209ENST00000583382 RNF25Q96BH1 459 aaPredicted RBP9.2□□□□□ -0.94
CDH8-209ENST00000583382 KIF12Q96FN5 646 aa9.2□□□□□ -0.94
CDH8-209ENST00000583382 CYB5RLQ6IPT4 315 aa9.19□□□□□ -0.94
CDH8-209ENST00000583382 MAP3K13O43283 966 aa9.17□□□□□ -0.94
CDH8-209ENST00000583382 CADPSQ9ULU8 1353 aa9.17□□□□□ -0.94
CDH8-209ENST00000583382 ARHGEF11O15085 1522 aa9.16□□□□□ -0.94
CDH8-209ENST00000583382 CEP164Q9UPV0 1460 aa9.15□□□□□ -0.94
CDH8-209ENST00000583382 PCDHB13Q9Y5F0 798 aa9.15□□□□□ -0.95
CDH8-209ENST00000583382 RIOK3O14730 519 aaKnown RBP9.14□□□□□ -0.95
CDH8-209ENST00000583382 PCDHB8Q9UN66 801 aa9.14□□□□□ -0.95
CDH8-209ENST00000583382 IFNL1Q8IU54 200 aa9.13□□□□□ -0.95
CDH8-209ENST00000583382 SGIP1Q9BQI5 828 aa9.12□□□□□ -0.95
CDH8-209ENST00000583382 ZNF467Q7Z7K2 595 aaPredicted RBP9.11□□□□□ -0.95
CDH8-209ENST00000583382 MS4A3Q96HJ5 214 aa9.11□□□□□ -0.95
CDH8-209ENST00000583382 GALR2O43603 387 aaPredicted RBP9.09□□□□□ -0.95
CDH8-209ENST00000583382 VGFO15240 615 aaPredicted RBP9.07□□□□□ -0.96
CDH8-209ENST00000583382 FANCD2Q9BXW9 1451 aa9.07□□□□□ -0.96
CDH8-209ENST00000583382 GABBR2O75899 941 aa9.06□□□□□ -0.96
CDH8-209ENST00000583382 TRPC6Q9Y210 931 aa9.06□□□□□ -0.96
CDH8-209ENST00000583382 CLCN6P51797 869 aa9.05□□□□□ -0.96
CDH8-209ENST00000583382 ILDR1Q86SU0 546 aaPredicted RBP9.05□□□□□ -0.96
CDH8-209ENST00000583382 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.05□□□□□ -0.96
CDH8-209ENST00000583382 SP7Q8TDD2 431 aaPredicted RBP9.05□□□□□ -0.96
CDH8-209ENST00000583382 ZFP91Q96JP5 570 aaPredicted RBP9.05□□□□□ -0.96
CDH8-209ENST00000583382 TAOK2Q9UL54 1235 aa9.05□□□□□ -0.96
CDH8-209ENST00000583382 CHGAP10645 457 aaKnown RBP9.04□□□□□ -0.96
CDH8-209ENST00000583382 PDAP1Q13442 181 aaKnown RBP9.04□□□□□ -0.96
CDH8-209ENST00000583382 PSEN1P49768 467 aa9.03□□□□□ -0.96
CDH8-209ENST00000583382 ARAP1Q96P48 1450 aa9.01□□□□□ -0.97
CDH8-209ENST00000583382 MROH2BQ7Z745 1585 aa9.01□□□□□ -0.97
CDH8-209ENST00000583382 STK25O00506 426 aa9□□□□□ -0.97
CDH8-209ENST00000583382 HS6ST3Q8IZP7 471 aa9□□□□□ -0.97
CDH8-209ENST00000583382 RSF1Q96T23 1441 aaPredicted RBP9□□□□□ -0.97
CDH8-209ENST00000583382 URB2Q14146 1524 aaKnown RBP9□□□□□ -0.97
CDH8-209ENST00000583382 BCL11BQ9C0K0 894 aaPredicted RBP9□□□□□ -0.97
CDH8-209ENST00000583382 IFT140Q96RY7 1462 aa8.98□□□□□ -0.97
CDH8-209ENST00000583382 TMEM106CQ9BVX2 250 aa8.98□□□□□ -0.97
CDH8-209ENST00000583382 STK24Q9Y6E0 443 aa8.98□□□□□ -0.97
CDH8-209ENST00000583382 CFTRP13569 1480 aa8.98□□□□□ -0.97
CDH8-209ENST00000583382 CHD1O14646 1710 aa8.97□□□□□ -0.97
CDH8-209ENST00000583382 TIE1P35590 1138 aa8.97□□□□□ -0.97
CDH8-209ENST00000583382 BMP2KQ9NSY1 1161 aaPredicted RBP8.97□□□□□ -0.97
CDH8-209ENST00000583382 TTLL13PA6NNM8 815 aa8.96□□□□□ -0.97
CDH8-209ENST00000583382 PRDM2Q13029 1718 aa8.96□□□□□ -0.98
CDH8-209ENST00000583382 ZNF608Q9ULD9 1512 aaPredicted RBP8.94□□□□□ -0.98
CDH8-209ENST00000583382 CABP2Q9NPB3 220 aa8.93□□□□□ -0.98
CDH8-209ENST00000583382 EIF4G3O43432 1585 aaKnown RBP8.93□□□□□ -0.98
CDH8-209ENST00000583382 ATMINO43313 823 aaPredicted RBP8.92□□□□□ -0.98
CDH8-209ENST00000583382 BBXQ8WY36 941 aaPredicted RBP8.92□□□□□ -0.98
CDH8-209ENST00000583382 ATN1P54259 1190 aaPredicted RBP8.91□□□□□ -0.98
CDH8-209ENST00000583382 ASTLQ6HA08 431 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms