RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 JPH4Q96JJ6 628 aa28.82■■■□□ 2.2
SREBF1-221ENST00000583080 ADCY10Q96PN6 1610 aa28.69■■■□□ 2.18
SREBF1-221ENST00000583080 ABCC10Q5T3U5 1492 aa28.66■■■□□ 2.18
SREBF1-221ENST00000583080 MAPKBP1O60336 1514 aa28.65■■■□□ 2.18
SREBF1-221ENST00000583080 KIAA0586Q9BVV6 1533 aa28.63■■■□□ 2.17
SREBF1-221ENST00000583080 IGF1RP08069 1367 aa28.62■■■□□ 2.17
SREBF1-221ENST00000583080 DIP2BQ9P265 1576 aa28.62■■■□□ 2.17
SREBF1-221ENST00000583080 CUL7Q14999 1698 aa28.62■■■□□ 2.17
SREBF1-221ENST00000583080 FAM69CQ0P6D2 419 aa28.6■■■□□ 2.17
SREBF1-221ENST00000583080 KIF27Q86VH2 1401 aa28.6■■■□□ 2.17
SREBF1-221ENST00000583080 NPM1P06748 294 aaKnown RBP eCLIP28.56■■■□□ 2.16
SREBF1-221ENST00000583080 CARMIL1Q5VZK9 1371 aa28.42■■■□□ 2.14
SREBF1-221ENST00000583080 KDM6BO15054 1643 aa28.42■■■□□ 2.14
SREBF1-221ENST00000583080 TSPOAP1O95153 1857 aa28.42■■■□□ 2.14
SREBF1-221ENST00000583080 PTPRGP23470 1445 aa28.4■■■□□ 2.14
SREBF1-221ENST00000583080 TTBK1Q5TCY1 1321 aaPredicted RBP28.37■■■□□ 2.13
SREBF1-221ENST00000583080 IQGAP2Q13576 1575 aa28.36■■■□□ 2.13
SREBF1-221ENST00000583080 TNIKQ9UKE5 1360 aa28.34■■■□□ 2.13
SREBF1-221ENST00000583080 ABCC2Q92887 1545 aa28.33■■■□□ 2.13
SREBF1-221ENST00000583080 CARMIL2Q6F5E8 1435 aa28.32■■■□□ 2.12
SREBF1-221ENST00000583080 ASXL2Q76L83 1435 aa28.26■■■□□ 2.11
SREBF1-221ENST00000583080 DISP1Q96F81 1524 aa28.25■■■□□ 2.11
SREBF1-221ENST00000583080 PPRC1Q5VV67 1664 aaKnown RBP28.24■■■□□ 2.11
SREBF1-221ENST00000583080 UHRF1BP1LA0JNW5 1464 aa28.23■■■□□ 2.11
SREBF1-221ENST00000583080 KDM4FA0A1W2PPD8 638 aa28.23■■■□□ 2.11
SREBF1-221ENST00000583080 PLB1Q6P1J6 1458 aa28.21■■■□□ 2.11
SREBF1-221ENST00000583080 GLI2P10070 1586 aa28.2■■■□□ 2.11
SREBF1-221ENST00000583080 UACAQ9BZF9 1416 aa28.19■■■□□ 2.1
SREBF1-221ENST00000583080 UGGT2Q9NYU1 1516 aa28.16■■■□□ 2.1
SREBF1-221ENST00000583080 RAPGEF2Q9Y4G8 1499 aa28.15■■■□□ 2.1
SREBF1-221ENST00000583080 KIAA0556O60303 1618 aa28.13■■■□□ 2.09
SREBF1-221ENST00000583080 KDM5BQ9UGL1 1544 aa28.12■■■□□ 2.09
SREBF1-221ENST00000583080 EPRSP07814 1512 aaKnown RBP28.1■■■□□ 2.09
SREBF1-221ENST00000583080 ZCCHC11Q5TAX3 1644 aaKnown RBP28.1■■■□□ 2.09
SREBF1-221ENST00000583080 MAP3K4Q9Y6R4 1608 aa28.07■■■□□ 2.08
SREBF1-221ENST00000583080 COL17A1Q9UMD9 1497 aaPredicted RBP28.05■■■□□ 2.08
SREBF1-221ENST00000583080 ADGRL1O94910 1474 aa27.99■■■□□ 2.07
SREBF1-221ENST00000583080 CTTNBP2Q8WZ74 1663 aa27.99■■■□□ 2.07
SREBF1-221ENST00000583080 TEX14Q8IWB6 1497 aa27.95■■■□□ 2.07
SREBF1-221ENST00000583080 WDR7Q9Y4E6 1490 aa27.95■■■□□ 2.06
SREBF1-221ENST00000583080 ABCA8O94911 1581 aa27.87■■■□□ 2.05
SREBF1-221ENST00000583080 GOLGA3Q08378 1498 aa27.85■■■□□ 2.05
SREBF1-221ENST00000583080 PRXQ9BXM0 1461 aa27.82■■■□□ 2.04
SREBF1-221ENST00000583080 CFAP43Q8NDM7 1665 aa27.8■■■□□ 2.04
SREBF1-221ENST00000583080 MAGI3Q5TCQ9 1506 aa27.77■■■□□ 2.04
SREBF1-221ENST00000583080 CD109Q6YHK3 1445 aa27.76■■■□□ 2.04
SREBF1-221ENST00000583080 KCNH8Q96L42 1107 aa27.73■■■□□ 2.03
SREBF1-221ENST00000583080 HECW2Q9P2P5 1572 aa27.7■■■□□ 2.03
SREBF1-221ENST00000583080 ARID3CA6NKF2 412 aa27.65■■■□□ 2.02
SREBF1-221ENST00000583080 ILDR1Q86SU0 546 aaPredicted RBP27.64■■■□□ 2.02
SREBF1-221ENST00000583080 KIF21BO75037 1637 aa27.63■■■□□ 2.01
SREBF1-221ENST00000583080 P3H3Q8IVL6 736 aa27.61■■■□□ 2.01
SREBF1-221ENST00000583080 ATP10BO94823 1461 aa27.61■■■□□ 2.01
SREBF1-221ENST00000583080 SAMD9Q5K651 1589 aa27.58■■■□□ 2.01
SREBF1-221ENST00000583080 ARAP3Q8WWN8 1544 aa27.57■■■□□ 2
SREBF1-221ENST00000583080 ABCA9Q8IUA7 1624 aa27.55■■■□□ 2
SREBF1-221ENST00000583080 RAPGEF6Q8TEU7 1601 aa27.52■■■□□ 2
SREBF1-221ENST00000583080 CSRNP3Q8WYN3 585 aa27.45■■□□□ 1.98
SREBF1-221ENST00000583080 FAM9AQ8IZU1 332 aaPredicted RBP27.44■■□□□ 1.98
SREBF1-221ENST00000583080 NUP153P49790 1475 aaKnown RBP27.43■■□□□ 1.98
SREBF1-221ENST00000583080 FRMPD1Q5SYB0 1578 aa27.41■■□□□ 1.98
SREBF1-221ENST00000583080 NEO1Q92859 1461 aa27.4■■□□□ 1.98
SREBF1-221ENST00000583080 PHLDB1Q86UU1 1377 aa27.4■■□□□ 1.98
SREBF1-221ENST00000583080 RAPGEF3O95398 923 aa27.39■■□□□ 1.98
SREBF1-221ENST00000583080 FHOD3Q2V2M9 1422 aa27.39■■□□□ 1.97
SREBF1-221ENST00000583080 ADAMTSL3P82987 1691 aa27.38■■□□□ 1.97
SREBF1-221ENST00000583080 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.36■■□□□ 1.97
SREBF1-221ENST00000583080 HNRNPUL2Q1KMD3 747 aaKnown RBP27.36■■□□□ 1.97
SREBF1-221ENST00000583080 RANGAP1P46060 587 aaPredicted RBP27.35■■□□□ 1.97
SREBF1-221ENST00000583080 PTPRMP28827 1452 aa27.33■■□□□ 1.97
SREBF1-221ENST00000583080 EEA1Q15075 1411 aa27.3■■□□□ 1.96
SREBF1-221ENST00000583080 BCORL1Q5H9F3 1711 aa27.3■■□□□ 1.96
SREBF1-221ENST00000583080 MADDQ8WXG6 1647 aa27.27■■□□□ 1.96
SREBF1-221ENST00000583080 ARHGEF40Q8TER5 1519 aa27.26■■□□□ 1.96
SREBF1-221ENST00000583080 RICTORQ6R327 1708 aa27.24■■□□□ 1.95
SREBF1-221ENST00000583080 TTC37Q6PGP7 1564 aa27.22■■□□□ 1.95
SREBF1-221ENST00000583080 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.22■■□□□ 1.95
SREBF1-221ENST00000583080 EFCAB5A4FU69 1503 aa27.21■■□□□ 1.95
SREBF1-221ENST00000583080 DENND4BO75064 1496 aaPredicted RBP27.2■■□□□ 1.95
SREBF1-221ENST00000583080 FANCAO15360 1455 aa27.19■■□□□ 1.94
SREBF1-221ENST00000583080 ARID4BQ4LE39 1312 aaPredicted RBP27.19■■□□□ 1.94
SREBF1-221ENST00000583080 AKNAQ7Z591 1439 aa27.18■■□□□ 1.94
SREBF1-221ENST00000583080 PLEKHD1A6NEE1 506 aa27.18■■□□□ 1.94
SREBF1-221ENST00000583080 CFAP74Q9C0B2 1584 aa27.18■■□□□ 1.94
SREBF1-221ENST00000583080 PCF11O94913 1555 aaKnown RBP27.16■■□□□ 1.94
SREBF1-221ENST00000583080 RIMS1Q86UR5 1692 aaKnown RBP27.16■■□□□ 1.94
SREBF1-221ENST00000583080 CDK13Q14004 1512 aaKnown RBP27.16■■□□□ 1.94
SREBF1-221ENST00000583080 ZMYM4Q5VZL5 1548 aa27.14■■□□□ 1.94
SREBF1-221ENST00000583080 LMTK3Q96Q04 1460 aa27.13■■□□□ 1.93
SREBF1-221ENST00000583080 SIGLEC1Q9BZZ2 1709 aa27.13■■□□□ 1.93
SREBF1-221ENST00000583080 YEATS2Q9ULM3 1422 aa27.09■■□□□ 1.93
SREBF1-221ENST00000583080 ZFYVE16Q7Z3T8 1539 aa27.09■■□□□ 1.93
SREBF1-221ENST00000583080 HECW1Q76N89 1606 aa27.05■■□□□ 1.92
SREBF1-221ENST00000583080 FBXO41Q8TF61 875 aa27.04■■□□□ 1.92
SREBF1-221ENST00000583080 POGZQ7Z3K3 1410 aa27.01■■□□□ 1.91
SREBF1-221ENST00000583080 MAGI2Q86UL8 1455 aa27■■□□□ 1.91
SREBF1-221ENST00000583080 PLCH2O75038 1416 aa26.99■■□□□ 1.91
SREBF1-221ENST00000583080 EHMT2Q96KQ7 1210 aa26.99■■□□□ 1.91
SREBF1-221ENST00000583080 SCAPERQ9BY12 1400 aa26.99■■□□□ 1.91
SREBF1-221ENST00000583080 PLPPR3Q6T4P5 718 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms