RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 PRG4Q92954 1404 aaPredicted RBP15.63■□□□□ 0.09
PDLIM1P3-201ENST00000582370 FAM69CQ0P6D2 419 aa15.63■□□□□ 0.09
PDLIM1P3-201ENST00000582370 ERICH3Q5RHP9 1530 aa15.63■□□□□ 0.09
PDLIM1P3-201ENST00000582370 ADCY10Q96PN6 1610 aa15.61■□□□□ 0.09
PDLIM1P3-201ENST00000582370 RUSC2Q8N2Y8 1516 aa15.6■□□□□ 0.09
PDLIM1P3-201ENST00000582370 BIVM-ERCC5R4GMW8 1640 aa15.6■□□□□ 0.09
PDLIM1P3-201ENST00000582370 WRNQ14191 1432 aaPredicted RBP eCLIP15.6■□□□□ 0.09
PDLIM1P3-201ENST00000582370 NPM1P06748 294 aaKnown RBP eCLIP15.58■□□□□ 0.08
PDLIM1P3-201ENST00000582370 TOP2BQ02880 1626 aa15.55■□□□□ 0.08
PDLIM1P3-201ENST00000582370 JPH4Q96JJ6 628 aa15.53■□□□□ 0.08
PDLIM1P3-201ENST00000582370 HECW2Q9P2P5 1572 aa15.5■□□□□ 0.07
PDLIM1P3-201ENST00000582370 ADGRL1O94910 1474 aa15.5■□□□□ 0.07
PDLIM1P3-201ENST00000582370 PPRC1Q5VV67 1664 aaKnown RBP15.48■□□□□ 0.07
PDLIM1P3-201ENST00000582370 GLI2P10070 1586 aa15.43■□□□□ 0.06
PDLIM1P3-201ENST00000582370 KIAA0586Q9BVV6 1533 aa15.38■□□□□ 0.05
PDLIM1P3-201ENST00000582370 CUL7Q14999 1698 aa15.37■□□□□ 0.05
PDLIM1P3-201ENST00000582370 ABCC2Q92887 1545 aa15.36■□□□□ 0.05
PDLIM1P3-201ENST00000582370 MAP3K4Q9Y6R4 1608 aa15.35■□□□□ 0.05
PDLIM1P3-201ENST00000582370 PLB1Q6P1J6 1458 aa15.35■□□□□ 0.05
PDLIM1P3-201ENST00000582370 ASXL2Q76L83 1435 aa15.33■□□□□ 0.04
PDLIM1P3-201ENST00000582370 TEX14Q8IWB6 1497 aa15.31■□□□□ 0.04
PDLIM1P3-201ENST00000582370 PTPRGP23470 1445 aa15.3■□□□□ 0.04
PDLIM1P3-201ENST00000582370 COL17A1Q9UMD9 1497 aaPredicted RBP15.29■□□□□ 0.04
PDLIM1P3-201ENST00000582370 FBXO41Q8TF61 875 aa15.28■□□□□ 0.04
PDLIM1P3-201ENST00000582370 UHRF1BP1LA0JNW5 1464 aa15.27■□□□□ 0.04
PDLIM1P3-201ENST00000582370 CARMIL2Q6F5E8 1435 aa15.26■□□□□ 0.03
PDLIM1P3-201ENST00000582370 TNIKQ9UKE5 1360 aa15.25■□□□□ 0.03
PDLIM1P3-201ENST00000582370 EPRSP07814 1512 aaKnown RBP15.25■□□□□ 0.03
PDLIM1P3-201ENST00000582370 SUPT5HO00267 1087 aaKnown RBP15.24■□□□□ 0.03
PDLIM1P3-201ENST00000582370 ZCCHC11Q5TAX3 1644 aaKnown RBP15.22■□□□□ 0.03
PDLIM1P3-201ENST00000582370 IQGAP2Q13576 1575 aa15.21■□□□□ 0.03
PDLIM1P3-201ENST00000582370 KDM5BQ9UGL1 1544 aa15.21■□□□□ 0.03
PDLIM1P3-201ENST00000582370 UACAQ9BZF9 1416 aa15.2■□□□□ 0.02
PDLIM1P3-201ENST00000582370 IGF1RP08069 1367 aa15.18■□□□□ 0.02
PDLIM1P3-201ENST00000582370 CFAP43Q8NDM7 1665 aa15.18■□□□□ 0.02
PDLIM1P3-201ENST00000582370 KIF21BO75037 1637 aa15.17■□□□□ 0.02
PDLIM1P3-201ENST00000582370 KIF27Q86VH2 1401 aa15.17■□□□□ 0.02
PDLIM1P3-201ENST00000582370 TTBK1Q5TCY1 1321 aaPredicted RBP15.16■□□□□ 0.02
PDLIM1P3-201ENST00000582370 DISP1Q96F81 1524 aa15.13■□□□□ 0.01
PDLIM1P3-201ENST00000582370 WDR7Q9Y4E6 1490 aa15.12■□□□□ 0.01
PDLIM1P3-201ENST00000582370 MAGI3Q5TCQ9 1506 aa15.12■□□□□ 0.01
PDLIM1P3-201ENST00000582370 KIAA0556O60303 1618 aa15.09■□□□□ 0.01
PDLIM1P3-201ENST00000582370 ADAMTSL3P82987 1691 aa15.08■□□□□ 0
PDLIM1P3-201ENST00000582370 CARMIL1Q5VZK9 1371 aa15.08■□□□□ 0
PDLIM1P3-201ENST00000582370 UGGT2Q9NYU1 1516 aa15.07■□□□□ 0
PDLIM1P3-201ENST00000582370 LMTK3Q96Q04 1460 aa15.06■□□□□ 0
PDLIM1P3-201ENST00000582370 CD109Q6YHK3 1445 aa15.05■□□□□ -0
PDLIM1P3-201ENST00000582370 PCF11O94913 1555 aaKnown RBP15.04■□□□□ -0
PDLIM1P3-201ENST00000582370 PTPRMP28827 1452 aa15.04■□□□□ -0
PDLIM1P3-201ENST00000582370 ARAP3Q8WWN8 1544 aa15.02□□□□□ -0.01
PDLIM1P3-201ENST00000582370 BCORL1Q5H9F3 1711 aa15□□□□□ -0.01
PDLIM1P3-201ENST00000582370 CTTNBP2Q8WZ74 1663 aa14.98□□□□□ -0.01
PDLIM1P3-201ENST00000582370 MADDQ8WXG6 1647 aa14.98□□□□□ -0.01
PDLIM1P3-201ENST00000582370 ABCA8O94911 1581 aa14.97□□□□□ -0.01
PDLIM1P3-201ENST00000582370 RAPGEF2Q9Y4G8 1499 aa14.93□□□□□ -0.02
PDLIM1P3-201ENST00000582370 RIMS1Q86UR5 1692 aaKnown RBP14.93□□□□□ -0.02
PDLIM1P3-201ENST00000582370 ABCA9Q8IUA7 1624 aa14.92□□□□□ -0.02
PDLIM1P3-201ENST00000582370 PHLDB1Q86UU1 1377 aa14.91□□□□□ -0.02
PDLIM1P3-201ENST00000582370 GOLGA3Q08378 1498 aa14.9□□□□□ -0.02
PDLIM1P3-201ENST00000582370 KCNH8Q96L42 1107 aa14.89□□□□□ -0.03
PDLIM1P3-201ENST00000582370 FRMPD1Q5SYB0 1578 aa14.89□□□□□ -0.03
PDLIM1P3-201ENST00000582370 SOCS7O14512 581 aa14.88□□□□□ -0.03
PDLIM1P3-201ENST00000582370 ARHGEF40Q8TER5 1519 aa14.87□□□□□ -0.03
PDLIM1P3-201ENST00000582370 NEO1Q92859 1461 aa14.86□□□□□ -0.03
PDLIM1P3-201ENST00000582370 DISP3Q9P2K9 1392 aa14.84□□□□□ -0.03
PDLIM1P3-201ENST00000582370 CERKQ8TCT0 537 aa14.83□□□□□ -0.04
PDLIM1P3-201ENST00000582370 RICTORQ6R327 1708 aa14.82□□□□□ -0.04
PDLIM1P3-201ENST00000582370 SPATA31D1Q6ZQQ2 1576 aa14.81□□□□□ -0.04
PDLIM1P3-201ENST00000582370 ILDR2Q71H61 639 aa14.81□□□□□ -0.04
PDLIM1P3-201ENST00000582370 FER1L4A9Z1Z3 1794 aa14.8□□□□□ -0.04
PDLIM1P3-201ENST00000582370 ARID4BQ4LE39 1312 aaPredicted RBP14.79□□□□□ -0.04
PDLIM1P3-201ENST00000582370 RAPGEF3O95398 923 aa14.78□□□□□ -0.04
PDLIM1P3-201ENST00000582370 PREX1Q8TCU6 1659 aa14.77□□□□□ -0.04
PDLIM1P3-201ENST00000582370 TTC37Q6PGP7 1564 aa14.77□□□□□ -0.05
PDLIM1P3-201ENST00000582370 CFAP74Q9C0B2 1584 aa14.77□□□□□ -0.05
PDLIM1P3-201ENST00000582370 FANCAO15360 1455 aa14.76□□□□□ -0.05
PDLIM1P3-201ENST00000582370 ATP10BO94823 1461 aa14.76□□□□□ -0.05
PDLIM1P3-201ENST00000582370 HSPA2P54652 639 aa14.76□□□□□ -0.05
PDLIM1P3-201ENST00000582370 POGZQ7Z3K3 1410 aa14.75□□□□□ -0.05
PDLIM1P3-201ENST00000582370 ZMYM4Q5VZL5 1548 aa14.74□□□□□ -0.05
PDLIM1P3-201ENST00000582370 SIGLEC1Q9BZZ2 1709 aa14.74□□□□□ -0.05
PDLIM1P3-201ENST00000582370 EFCAB5A4FU69 1503 aa14.72□□□□□ -0.05
PDLIM1P3-201ENST00000582370 RAPGEF6Q8TEU7 1601 aa14.72□□□□□ -0.05
PDLIM1P3-201ENST00000582370 DENND4BO75064 1496 aaPredicted RBP14.71□□□□□ -0.05
PDLIM1P3-201ENST00000582370 FAM9AQ8IZU1 332 aaPredicted RBP14.71□□□□□ -0.05
PDLIM1P3-201ENST00000582370 AKNAQ7Z591 1439 aa14.71□□□□□ -0.05
PDLIM1P3-201ENST00000582370 STRCQ7RTU9 1775 aa14.7□□□□□ -0.06
PDLIM1P3-201ENST00000582370 FHOD3Q2V2M9 1422 aa14.7□□□□□ -0.06
PDLIM1P3-201ENST00000582370 ZFYVE16Q7Z3T8 1539 aa14.7□□□□□ -0.06
PDLIM1P3-201ENST00000582370 MAGI2Q86UL8 1455 aa14.67□□□□□ -0.06
PDLIM1P3-201ENST00000582370 SAMD9Q5K651 1589 aa14.67□□□□□ -0.06
PDLIM1P3-201ENST00000582370 ARID3CA6NKF2 412 aa14.66□□□□□ -0.06
PDLIM1P3-201ENST00000582370 YEATS2Q9ULM3 1422 aa14.66□□□□□ -0.06
PDLIM1P3-201ENST00000582370 PLPPR3Q6T4P5 718 aa14.64□□□□□ -0.07
PDLIM1P3-201ENST00000582370 ARHGEF12Q9NZN5 1544 aa14.64□□□□□ -0.07
PDLIM1P3-201ENST00000582370 DMRT2Q9Y5R5 561 aa14.63□□□□□ -0.07
PDLIM1P3-201ENST00000582370 SETD1BQ9UPS6 1966 aaKnown RBP14.63□□□□□ -0.07
PDLIM1P3-201ENST00000582370 PRXQ9BXM0 1461 aa14.63□□□□□ -0.07
PDLIM1P3-201ENST00000582370 HECW1Q76N89 1606 aa14.63□□□□□ -0.07
PDLIM1P3-201ENST00000582370 IQSEC2Q5JU85 1478 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms