RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 PRG4Q92954 1404 aaPredicted RBP18.66■□□□□ 0.58
RFFL-209ENST00000581265 NPM1P06748 294 aaKnown RBP eCLIP18.65■□□□□ 0.58
RFFL-209ENST00000581265 KIF13AQ9H1H9 1805 aa18.61■□□□□ 0.57
RFFL-209ENST00000581265 IGF1RP08069 1367 aa18.61■□□□□ 0.57
RFFL-209ENST00000581265 KDM4FA0A1W2PPD8 638 aa18.61■□□□□ 0.57
RFFL-209ENST00000581265 KIF27Q86VH2 1401 aa18.57■□□□□ 0.56
RFFL-209ENST00000581265 RUSC2Q8N2Y8 1516 aa18.54■□□□□ 0.56
RFFL-209ENST00000581265 KIAA0586Q9BVV6 1533 aa18.53■□□□□ 0.56
RFFL-209ENST00000581265 ABCC10Q5T3U5 1492 aa18.52■□□□□ 0.56
RFFL-209ENST00000581265 KDM6BO15054 1643 aa18.5■□□□□ 0.55
RFFL-209ENST00000581265 CUL7Q14999 1698 aa18.47■□□□□ 0.55
RFFL-209ENST00000581265 CARMIL1Q5VZK9 1371 aa18.46■□□□□ 0.55
RFFL-209ENST00000581265 DIP2BQ9P265 1576 aa18.42■□□□□ 0.54
RFFL-209ENST00000581265 MAPKBP1O60336 1514 aa18.41■□□□□ 0.54
RFFL-209ENST00000581265 ADCY10Q96PN6 1610 aa18.38■□□□□ 0.53
RFFL-209ENST00000581265 PTPRGP23470 1445 aa18.38■□□□□ 0.53
RFFL-209ENST00000581265 TSPOAP1O95153 1857 aa18.36■□□□□ 0.53
RFFL-209ENST00000581265 CARMIL2Q6F5E8 1435 aa18.34■□□□□ 0.53
RFFL-209ENST00000581265 TNIKQ9UKE5 1360 aa18.33■□□□□ 0.53
RFFL-209ENST00000581265 ADGRL1O94910 1474 aa18.31■□□□□ 0.52
RFFL-209ENST00000581265 TTBK1Q5TCY1 1321 aaPredicted RBP18.29■□□□□ 0.52
RFFL-209ENST00000581265 IQGAP2Q13576 1575 aa18.29■□□□□ 0.52
RFFL-209ENST00000581265 RAPGEF2Q9Y4G8 1499 aa18.26■□□□□ 0.51
RFFL-209ENST00000581265 ABCC2Q92887 1545 aa18.25■□□□□ 0.51
RFFL-209ENST00000581265 DISP1Q96F81 1524 aa18.24■□□□□ 0.51
RFFL-209ENST00000581265 HECW2Q9P2P5 1572 aa18.23■□□□□ 0.51
RFFL-209ENST00000581265 UHRF1BP1LA0JNW5 1464 aa18.23■□□□□ 0.51
RFFL-209ENST00000581265 UACAQ9BZF9 1416 aa18.23■□□□□ 0.51
RFFL-209ENST00000581265 PLB1Q6P1J6 1458 aa18.2■□□□□ 0.5
RFFL-209ENST00000581265 UGGT2Q9NYU1 1516 aa18.2■□□□□ 0.5
RFFL-209ENST00000581265 ASXL2Q76L83 1435 aa18.2■□□□□ 0.5
RFFL-209ENST00000581265 FBXO41Q8TF61 875 aa18.16■□□□□ 0.5
RFFL-209ENST00000581265 KDM5BQ9UGL1 1544 aa18.15■□□□□ 0.5
RFFL-209ENST00000581265 GLI2P10070 1586 aa18.15■□□□□ 0.5
RFFL-209ENST00000581265 KIAA0556O60303 1618 aa18.11■□□□□ 0.49
RFFL-209ENST00000581265 EPRSP07814 1512 aaKnown RBP18.08■□□□□ 0.49
RFFL-209ENST00000581265 PRXQ9BXM0 1461 aa18.07■□□□□ 0.48
RFFL-209ENST00000581265 PPRC1Q5VV67 1664 aaKnown RBP18.06■□□□□ 0.48
RFFL-209ENST00000581265 GOLGA3Q08378 1498 aa18.06■□□□□ 0.48
RFFL-209ENST00000581265 TEX14Q8IWB6 1497 aa18.06■□□□□ 0.48
RFFL-209ENST00000581265 COL17A1Q9UMD9 1497 aaPredicted RBP18.05■□□□□ 0.48
RFFL-209ENST00000581265 ZCCHC11Q5TAX3 1644 aaKnown RBP18.03■□□□□ 0.48
RFFL-209ENST00000581265 CTTNBP2Q8WZ74 1663 aa18.02■□□□□ 0.47
RFFL-209ENST00000581265 MAP3K4Q9Y6R4 1608 aa18.01■□□□□ 0.47
RFFL-209ENST00000581265 WDR7Q9Y4E6 1490 aa18.01■□□□□ 0.47
RFFL-209ENST00000581265 ABCA8O94911 1581 aa17.97■□□□□ 0.47
RFFL-209ENST00000581265 CSRNP3Q8WYN3 585 aa17.97■□□□□ 0.47
RFFL-209ENST00000581265 FAM9AQ8IZU1 332 aaPredicted RBP17.96■□□□□ 0.47
RFFL-209ENST00000581265 KCNH8Q96L42 1107 aa17.95■□□□□ 0.46
RFFL-209ENST00000581265 CD109Q6YHK3 1445 aa17.92■□□□□ 0.46
RFFL-209ENST00000581265 P3H3Q8IVL6 736 aa17.91■□□□□ 0.46
RFFL-209ENST00000581265 MAGI3Q5TCQ9 1506 aa17.91■□□□□ 0.46
RFFL-209ENST00000581265 LMTK3Q96Q04 1460 aa17.88■□□□□ 0.45
RFFL-209ENST00000581265 ATP10BO94823 1461 aa17.87■□□□□ 0.45
RFFL-209ENST00000581265 CFAP43Q8NDM7 1665 aa17.86■□□□□ 0.45
RFFL-209ENST00000581265 EEA1Q15075 1411 aa17.84■□□□□ 0.45
RFFL-209ENST00000581265 ARID3CA6NKF2 412 aa17.84■□□□□ 0.45
RFFL-209ENST00000581265 SAMD9Q5K651 1589 aa17.81■□□□□ 0.44
RFFL-209ENST00000581265 KIF21BO75037 1637 aa17.8■□□□□ 0.44
RFFL-209ENST00000581265 PHLDB1Q86UU1 1377 aa17.79■□□□□ 0.44
RFFL-209ENST00000581265 ARAP3Q8WWN8 1544 aa17.78■□□□□ 0.44
RFFL-209ENST00000581265 PTPRMP28827 1452 aa17.76■□□□□ 0.43
RFFL-209ENST00000581265 ARID4BQ4LE39 1312 aaPredicted RBP17.75■□□□□ 0.43
RFFL-209ENST00000581265 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.75■□□□□ 0.43
RFFL-209ENST00000581265 HNRNPUL2Q1KMD3 747 aaKnown RBP17.75■□□□□ 0.43
RFFL-209ENST00000581265 RAPGEF6Q8TEU7 1601 aa17.74■□□□□ 0.43
RFFL-209ENST00000581265 RANGAP1P46060 587 aaPredicted RBP17.74■□□□□ 0.43
RFFL-209ENST00000581265 ABCA9Q8IUA7 1624 aa17.73■□□□□ 0.43
RFFL-209ENST00000581265 NUP153P49790 1475 aaKnown RBP17.72■□□□□ 0.43
RFFL-209ENST00000581265 FHOD3Q2V2M9 1422 aa17.71■□□□□ 0.43
RFFL-209ENST00000581265 DISP3Q9P2K9 1392 aa17.7■□□□□ 0.42
RFFL-209ENST00000581265 PLEKHD1A6NEE1 506 aa17.7■□□□□ 0.42
RFFL-209ENST00000581265 NEO1Q92859 1461 aa17.69■□□□□ 0.42
RFFL-209ENST00000581265 SOCS7O14512 581 aa17.69■□□□□ 0.42
RFFL-209ENST00000581265 RAPGEF3O95398 923 aa17.69■□□□□ 0.42
RFFL-209ENST00000581265 PCF11O94913 1555 aaKnown RBP17.68■□□□□ 0.42
RFFL-209ENST00000581265 CERKQ8TCT0 537 aa17.68■□□□□ 0.42
RFFL-209ENST00000581265 PLPPR3Q6T4P5 718 aa17.67■□□□□ 0.42
RFFL-209ENST00000581265 ADAMTSL3P82987 1691 aa17.66■□□□□ 0.42
RFFL-209ENST00000581265 HSPA2P54652 639 aa17.64■□□□□ 0.41
RFFL-209ENST00000581265 ILDR2Q71H61 639 aa17.64■□□□□ 0.41
RFFL-209ENST00000581265 EFCAB5A4FU69 1503 aa17.63■□□□□ 0.41
RFFL-209ENST00000581265 MADDQ8WXG6 1647 aa17.59■□□□□ 0.41
RFFL-209ENST00000581265 UBTFP17480 764 aaKnown RBP17.59■□□□□ 0.41
RFFL-209ENST00000581265 CHIC1Q5VXU3 224 aa17.58■□□□□ 0.4
RFFL-209ENST00000581265 AKNAQ7Z591 1439 aa17.57■□□□□ 0.4
RFFL-209ENST00000581265 BCORL1Q5H9F3 1711 aa17.57■□□□□ 0.4
RFFL-209ENST00000581265 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.56■□□□□ 0.4
RFFL-209ENST00000581265 DENND4BO75064 1496 aaPredicted RBP17.56■□□□□ 0.4
RFFL-209ENST00000581265 FRMPD1Q5SYB0 1578 aa17.55■□□□□ 0.4
RFFL-209ENST00000581265 FANCAO15360 1455 aa17.55■□□□□ 0.4
RFFL-209ENST00000581265 RIMS1Q86UR5 1692 aaKnown RBP17.53■□□□□ 0.4
RFFL-209ENST00000581265 EHMT2Q96KQ7 1210 aa17.53■□□□□ 0.4
RFFL-209ENST00000581265 FMN1Q68DA7 1419 aa17.52■□□□□ 0.4
RFFL-209ENST00000581265 CDK13Q14004 1512 aaKnown RBP17.51■□□□□ 0.39
RFFL-209ENST00000581265 POGZQ7Z3K3 1410 aa17.5■□□□□ 0.39
RFFL-209ENST00000581265 ATP1B4Q9UN42 357 aaPredicted RBP17.5■□□□□ 0.39
RFFL-209ENST00000581265 CDK11AQ9UQ88 783 aaPredicted RBP17.5■□□□□ 0.39
RFFL-209ENST00000581265 ARHGAP35Q9NRY4 1499 aa17.5■□□□□ 0.39
RFFL-209ENST00000581265 PLCH2O75038 1416 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms