RNA–Protein interactions for RNA: ENST00000580904.1

PSMD11-209, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 4

Gene PSMD11, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-209ENST00000580904 FARP1Q9Y4F1 1045 aaPredicted RBP13.13□□□□□ -0.31
PSMD11-209ENST00000580904 MNX1P50219 401 aaPredicted RBP13.1□□□□□ -0.31
PSMD11-209ENST00000580904 EIF4G1Q04637 1599 aaKnown RBP13.07□□□□□ -0.32
PSMD11-209ENST00000580904 BAZ1AQ9NRL2 1556 aaPredicted RBP13.07□□□□□ -0.32
PSMD11-209ENST00000580904 GSE1Q14687 1217 aa13.05□□□□□ -0.32
PSMD11-209ENST00000580904 FAM212AQ96EL1 285 aa13.05□□□□□ -0.32
PSMD11-209ENST00000580904 RTN4Q9NQC3 1192 aaKnown RBP13.05□□□□□ -0.32
PSMD11-209ENST00000580904 SMARCA4P51532 1647 aa13.04□□□□□ -0.32
PSMD11-209ENST00000580904 MROH2BQ7Z745 1585 aa13.03□□□□□ -0.32
PSMD11-209ENST00000580904 NUBP1P53384 320 aa13.02□□□□□ -0.33
PSMD11-209ENST00000580904 PAK3O75914 559 aaPredicted RBP13.01□□□□□ -0.33
PSMD11-209ENST00000580904 CIZ1Q9ULV3 898 aaPredicted RBP13.01□□□□□ -0.33
PSMD11-209ENST00000580904 DCAF8Q5TAQ9 597 aa13□□□□□ -0.33
PSMD11-209ENST00000580904 TRIM41Q8WV44 630 aa12.99□□□□□ -0.33
PSMD11-209ENST00000580904 RSF1Q96T23 1441 aaPredicted RBP12.98□□□□□ -0.33
PSMD11-209ENST00000580904 CC2D2AQ9P2K1 1620 aa12.94□□□□□ -0.34
PSMD11-209ENST00000580904 RASEFQ8IZ41 740 aa12.92□□□□□ -0.34
PSMD11-209ENST00000580904 PEG3Q9GZU2 1588 aa12.91□□□□□ -0.34
PSMD11-209ENST00000580904 ATAD2BQ9ULI0 1458 aa12.9□□□□□ -0.34
PSMD11-209ENST00000580904 SMARCA2P51531 1590 aa12.9□□□□□ -0.35
PSMD11-209ENST00000580904 WIZO95785 1651 aa12.89□□□□□ -0.35
PSMD11-209ENST00000580904 TSPYL2Q9H2G4 693 aaPredicted RBP12.89□□□□□ -0.35
PSMD11-209ENST00000580904 ECM2O94769 699 aaPredicted RBP12.88□□□□□ -0.35
PSMD11-209ENST00000580904 PKD2Q13563 968 aa12.88□□□□□ -0.35
PSMD11-209ENST00000580904 CD44P16070 742 aaKnown RBP12.86□□□□□ -0.35
PSMD11-209ENST00000580904 NCAPD3P42695 1498 aa12.85□□□□□ -0.35
PSMD11-209ENST00000580904 SUPT5HO00267 1087 aaKnown RBP12.85□□□□□ -0.35
PSMD11-209ENST00000580904 POTEHQ6S545 545 aa12.84□□□□□ -0.35
PSMD11-209ENST00000580904 HAX1O00165 279 aa12.82□□□□□ -0.36
PSMD11-209ENST00000580904 HMGXB3Q12766 1538 aa12.82□□□□□ -0.36
PSMD11-209ENST00000580904 BAZ1BQ9UIG0 1483 aaKnown RBP12.81□□□□□ -0.36
PSMD11-209ENST00000580904 CHRM1P11229 460 aaPredicted RBP12.81□□□□□ -0.36
PSMD11-209ENST00000580904 ZRANB1Q9UGI0 708 aa12.81□□□□□ -0.36
PSMD11-209ENST00000580904 C19orf67A6NJJ6 358 aa12.8□□□□□ -0.36
PSMD11-209ENST00000580904 TAOK2Q9UL54 1235 aa12.79□□□□□ -0.36
PSMD11-209ENST00000580904 TOP2AP11388 1531 aaKnown RBP12.78□□□□□ -0.36
PSMD11-209ENST00000580904 CCDC61Q9Y6R9 512 aa12.76□□□□□ -0.37
PSMD11-209ENST00000580904 PYGBP11216 843 aa12.74□□□□□ -0.37
PSMD11-209ENST00000580904 CLCN6P51797 869 aa12.71□□□□□ -0.37
PSMD11-209ENST00000580904 SGIP1Q9BQI5 828 aa12.7□□□□□ -0.38
PSMD11-209ENST00000580904 ZNF467Q7Z7K2 595 aaPredicted RBP12.69□□□□□ -0.38
PSMD11-209ENST00000580904 ZNF579Q8NAF0 562 aaKnown RBP12.69□□□□□ -0.38
PSMD11-209ENST00000580904 RIOK3O14730 519 aaKnown RBP12.68□□□□□ -0.38
PSMD11-209ENST00000580904 RGL2O15211 777 aa12.66□□□□□ -0.38
PSMD11-209ENST00000580904 KIF12Q96FN5 646 aa12.64□□□□□ -0.39
PSMD11-209ENST00000580904 PCDHB13Q9Y5F0 798 aa12.64□□□□□ -0.39
PSMD11-209ENST00000580904 CCDC88BA6NC98 1476 aa12.62□□□□□ -0.39
PSMD11-209ENST00000580904 VGFO15240 615 aaPredicted RBP12.62□□□□□ -0.39
PSMD11-209ENST00000580904 PHF12Q96QT6 1004 aa12.61□□□□□ -0.39
PSMD11-209ENST00000580904 MAP3K13O43283 966 aa12.6□□□□□ -0.39
PSMD11-209ENST00000580904 RNF25Q96BH1 459 aaPredicted RBP12.56□□□□□ -0.4
PSMD11-209ENST00000580904 PDAP1Q13442 181 aaKnown RBP12.55□□□□□ -0.4
PSMD11-209ENST00000580904 EVX2Q03828 476 aa12.53□□□□□ -0.4
PSMD11-209ENST00000580904 IFNL1Q8IU54 200 aa12.53□□□□□ -0.4
PSMD11-209ENST00000580904 PCDHB8Q9UN66 801 aa12.53□□□□□ -0.4
PSMD11-209ENST00000580904 CHGAP10645 457 aaKnown RBP12.51□□□□□ -0.41
PSMD11-209ENST00000580904 CADPSQ9ULU8 1353 aa12.49□□□□□ -0.41
PSMD11-209ENST00000580904 CFTRP13569 1480 aa12.48□□□□□ -0.41
PSMD11-209ENST00000580904 STK25O00506 426 aa12.48□□□□□ -0.41
PSMD11-209ENST00000580904 PSEN1P49768 467 aa12.48□□□□□ -0.41
PSMD11-209ENST00000580904 MS4A3Q96HJ5 214 aa12.48□□□□□ -0.41
PSMD11-209ENST00000580904 HS6ST3Q8IZP7 471 aa12.47□□□□□ -0.41
PSMD11-209ENST00000580904 NESP48681 1621 aa12.47□□□□□ -0.41
PSMD11-209ENST00000580904 LAMC3Q9Y6N6 1575 aa12.47□□□□□ -0.41
PSMD11-209ENST00000580904 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.46□□□□□ -0.41
PSMD11-209ENST00000580904 ZFP91Q96JP5 570 aaPredicted RBP12.46□□□□□ -0.41
PSMD11-209ENST00000580904 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.45□□□□□ -0.42
PSMD11-209ENST00000580904 BBXQ8WY36 941 aaPredicted RBP12.43□□□□□ -0.42
PSMD11-209ENST00000580904 STK24Q9Y6E0 443 aa12.43□□□□□ -0.42
PSMD11-209ENST00000580904 TIE1P35590 1138 aa12.42□□□□□ -0.42
PSMD11-209ENST00000580904 SP7Q8TDD2 431 aaPredicted RBP12.42□□□□□ -0.42
PSMD11-209ENST00000580904 BCL11BQ9C0K0 894 aaPredicted RBP12.42□□□□□ -0.42
PSMD11-209ENST00000580904 GALR2O43603 387 aaPredicted RBP12.41□□□□□ -0.42
PSMD11-209ENST00000580904 GABBR2O75899 941 aa12.41□□□□□ -0.42
PSMD11-209ENST00000580904 GOLGA2Q08379 1002 aa12.4□□□□□ -0.42
PSMD11-209ENST00000580904 TMEM106CQ9BVX2 250 aa12.39□□□□□ -0.43
PSMD11-209ENST00000580904 PRDM2Q13029 1718 aa12.39□□□□□ -0.43
PSMD11-209ENST00000580904 DNAJC5Q9H3Z4 198 aa12.37□□□□□ -0.43
PSMD11-209ENST00000580904 RYDENQ9NUL5 291 aaKnown RBP12.37□□□□□ -0.43
PSMD11-209ENST00000580904 PDS5BQ9NTI5 1447 aa12.37□□□□□ -0.43
PSMD11-209ENST00000580904 DCBLD2Q96PD2 775 aa12.36□□□□□ -0.43
PSMD11-209ENST00000580904 FANCD2Q9BXW9 1451 aa12.35□□□□□ -0.43
PSMD11-209ENST00000580904 KIF21AQ7Z4S6 1674 aa12.32□□□□□ -0.44
PSMD11-209ENST00000580904 TTLL13PA6NNM8 815 aa12.31□□□□□ -0.44
PSMD11-209ENST00000580904 CABP2Q9NPB3 220 aa12.31□□□□□ -0.44
PSMD11-209ENST00000580904 CEP164Q9UPV0 1460 aa12.31□□□□□ -0.44
PSMD11-209ENST00000580904 ERCC6Q03468 1493 aa12.3□□□□□ -0.44
PSMD11-209ENST00000580904 MKRN3Q13064 507 aaKnown RBP12.3□□□□□ -0.44
PSMD11-209ENST00000580904 BMP2KQ9NSY1 1161 aaPredicted RBP12.3□□□□□ -0.44
PSMD11-209ENST00000580904 TRPC6Q9Y210 931 aa12.29□□□□□ -0.44
PSMD11-209ENST00000580904 SOX12O15370 315 aa12.28□□□□□ -0.44
PSMD11-209ENST00000580904 SPRYD3Q8NCJ5 442 aa12.27□□□□□ -0.45
PSMD11-209ENST00000580904 ASTLQ6HA08 431 aaPredicted RBP12.26□□□□□ -0.45
PSMD11-209ENST00000580904 TRIM35Q9UPQ4 493 aa12.25□□□□□ -0.45
PSMD11-209ENST00000580904 ABCC8Q09428 1581 aa12.25□□□□□ -0.45
PSMD11-209ENST00000580904 ATMINO43313 823 aaPredicted RBP12.24□□□□□ -0.45
PSMD11-209ENST00000580904 MRC2Q9UBG0 1479 aa12.23□□□□□ -0.45
PSMD11-209ENST00000580904 EFCAB3Q8N7B9 438 aa12.23□□□□□ -0.45
PSMD11-209ENST00000580904 WRNQ14191 1432 aaPredicted RBP eCLIP12.22□□□□□ -0.45
PSMD11-209ENST00000580904 NLRP6P59044 892 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms