RNA–Protein interactions for RNA: ENST00000580231.5

SENP3-203, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-203ENST00000580231 EIF4G1Q04637 1599 aaKnown RBP15.2■□□□□ 0.02
SENP3-203ENST00000580231 SMARCA4P51532 1647 aa15.18■□□□□ 0.02
SENP3-203ENST00000580231 WIZO95785 1651 aa15.16■□□□□ 0.02
SENP3-203ENST00000580231 PROM2Q8N271 834 aa15.16■□□□□ 0.02
SENP3-203ENST00000580231 TOP2AP11388 1531 aaKnown RBP15.07■□□□□ 0
SENP3-203ENST00000580231 ZRANB1Q9UGI0 708 aa15.04■□□□□ -0
SENP3-203ENST00000580231 PEG3Q9GZU2 1588 aa15.03■□□□□ -0
SENP3-203ENST00000580231 MNX1P50219 401 aaPredicted RBP15.03■□□□□ -0
SENP3-203ENST00000580231 CLCN6P51797 869 aa15.03■□□□□ -0
SENP3-203ENST00000580231 ZNF579Q8NAF0 562 aaKnown RBP15.02■□□□□ -0
SENP3-203ENST00000580231 NPM1P06748 294 aaKnown RBP eCLIP14.98□□□□□ -0.01
SENP3-203ENST00000580231 POTEIP0CG38 1075 aa14.95□□□□□ -0.02
SENP3-203ENST00000580231 SMARCA2P51531 1590 aa14.93□□□□□ -0.02
SENP3-203ENST00000580231 CCDC88BA6NC98 1476 aa14.92□□□□□ -0.02
SENP3-203ENST00000580231 PAK3O75914 559 aaPredicted RBP14.91□□□□□ -0.02
SENP3-203ENST00000580231 TRIM41Q8WV44 630 aa14.91□□□□□ -0.02
SENP3-203ENST00000580231 ATAD2BQ9ULI0 1458 aa14.9□□□□□ -0.02
SENP3-203ENST00000580231 DCBLD2Q96PD2 775 aa14.84□□□□□ -0.03
SENP3-203ENST00000580231 PHF12Q96QT6 1004 aa14.84□□□□□ -0.03
SENP3-203ENST00000580231 GALR2O43603 387 aaPredicted RBP14.83□□□□□ -0.04
SENP3-203ENST00000580231 LHX8Q68G74 356 aa14.82□□□□□ -0.04
SENP3-203ENST00000580231 BAZ1BQ9UIG0 1483 aaKnown RBP14.82□□□□□ -0.04
SENP3-203ENST00000580231 NCAPD3P42695 1498 aa14.78□□□□□ -0.04
SENP3-203ENST00000580231 FKBP8Q14318 412 aa14.78□□□□□ -0.04
SENP3-203ENST00000580231 MIER1Q8N108 512 aa14.77□□□□□ -0.05
SENP3-203ENST00000580231 HMGXB3Q12766 1538 aa14.75□□□□□ -0.05
SENP3-203ENST00000580231 PLEKHG5O94827 1062 aa14.73□□□□□ -0.05
SENP3-203ENST00000580231 TSPYL2Q9H2G4 693 aaPredicted RBP14.71□□□□□ -0.05
SENP3-203ENST00000580231 LOC105371045A0A1W2PR82 267 aa14.67□□□□□ -0.06
SENP3-203ENST00000580231 PLCD3Q8N3E9 789 aa14.66□□□□□ -0.06
SENP3-203ENST00000580231 CCDC61Q9Y6R9 512 aa14.66□□□□□ -0.06
SENP3-203ENST00000580231 MS4A3Q96HJ5 214 aa14.65□□□□□ -0.06
SENP3-203ENST00000580231 RASEFQ8IZ41 740 aa14.6□□□□□ -0.07
SENP3-203ENST00000580231 ABCC8Q09428 1581 aa14.6□□□□□ -0.07
SENP3-203ENST00000580231 WRNQ14191 1432 aaPredicted RBP eCLIP14.57□□□□□ -0.08
SENP3-203ENST00000580231 KIF12Q96FN5 646 aa14.56□□□□□ -0.08
SENP3-203ENST00000580231 EEA1Q15075 1411 aa14.56□□□□□ -0.08
SENP3-203ENST00000580231 PELP1Q8IZL8 1130 aaKnown RBP14.55□□□□□ -0.08
SENP3-203ENST00000580231 FAM9AQ8IZU1 332 aaPredicted RBP14.55□□□□□ -0.08
SENP3-203ENST00000580231 ASTLQ6HA08 431 aaPredicted RBP14.54□□□□□ -0.08
SENP3-203ENST00000580231 ZBTB47Q9UFB7 747 aaPredicted RBP14.54□□□□□ -0.08
SENP3-203ENST00000580231 ATMINO43313 823 aaPredicted RBP14.51□□□□□ -0.09
SENP3-203ENST00000580231 ERCC6Q03468 1493 aa14.5□□□□□ -0.09
SENP3-203ENST00000580231 NUBP1P53384 320 aa14.5□□□□□ -0.09
SENP3-203ENST00000580231 NESP48681 1621 aa14.49□□□□□ -0.09
SENP3-203ENST00000580231 CFTRP13569 1480 aa14.49□□□□□ -0.09
SENP3-203ENST00000580231 MAP3K13O43283 966 aa14.47□□□□□ -0.09
SENP3-203ENST00000580231 CUX2O14529 1486 aa14.46□□□□□ -0.09
SENP3-203ENST00000580231 POTEB2H3BUK9 544 aa14.46□□□□□ -0.09
SENP3-203ENST00000580231 FBXO3Q9UK99 471 aa14.46□□□□□ -0.09
SENP3-203ENST00000580231 SYNJ1O43426 1573 aa14.43□□□□□ -0.1
SENP3-203ENST00000580231 TRPC6Q9Y210 931 aa14.42□□□□□ -0.1
SENP3-203ENST00000580231 SOGA1O94964 1423 aa14.41□□□□□ -0.1
SENP3-203ENST00000580231 TOP2BQ02880 1626 aa14.41□□□□□ -0.1
SENP3-203ENST00000580231 SLC39A7Q92504 469 aa14.41□□□□□ -0.1
SENP3-203ENST00000580231 METRNQ9UJH8 293 aa14.41□□□□□ -0.1
SENP3-203ENST00000580231 CADPSQ9ULU8 1353 aa14.41□□□□□ -0.1
SENP3-203ENST00000580231 ATN1P54259 1190 aaPredicted RBP14.4□□□□□ -0.1
SENP3-203ENST00000580231 PRDM2Q13029 1718 aa14.39□□□□□ -0.11
SENP3-203ENST00000580231 C7P10643 843 aa14.39□□□□□ -0.11
SENP3-203ENST00000580231 BIVM-ERCC5R4GMW8 1640 aa14.39□□□□□ -0.11
SENP3-203ENST00000580231 OTUD5Q96G74 571 aa14.38□□□□□ -0.11
SENP3-203ENST00000580231 BMP2KQ9NSY1 1161 aaPredicted RBP14.38□□□□□ -0.11
SENP3-203ENST00000580231 DNAJC5Q9H3Z4 198 aa14.37□□□□□ -0.11
SENP3-203ENST00000580231 THOC2Q8NI27 1593 aaKnown RBP14.37□□□□□ -0.11
SENP3-203ENST00000580231 LAMC3Q9Y6N6 1575 aa14.37□□□□□ -0.11
SENP3-203ENST00000580231 TIE1P35590 1138 aa14.36□□□□□ -0.11
SENP3-203ENST00000580231 FAM212AQ96EL1 285 aa14.36□□□□□ -0.11
SENP3-203ENST00000580231 KIF21AQ7Z4S6 1674 aa14.36□□□□□ -0.11
SENP3-203ENST00000580231 SGIP1Q9BQI5 828 aa14.35□□□□□ -0.11
SENP3-203ENST00000580231 TNIKQ9UKE5 1360 aa14.34□□□□□ -0.11
SENP3-203ENST00000580231 PCDHB13Q9Y5F0 798 aa14.33□□□□□ -0.12
SENP3-203ENST00000580231 RUSC2Q8N2Y8 1516 aa14.32□□□□□ -0.12
SENP3-203ENST00000580231 VASPP50552 380 aaPredicted RBP14.3□□□□□ -0.12
SENP3-203ENST00000580231 GOLGA3Q08378 1498 aa14.29□□□□□ -0.12
SENP3-203ENST00000580231 CEP164Q9UPV0 1460 aa14.29□□□□□ -0.12
SENP3-203ENST00000580231 CUX1P39880 1505 aa14.29□□□□□ -0.12
SENP3-203ENST00000580231 TTLL13PA6NNM8 815 aa14.28□□□□□ -0.12
SENP3-203ENST00000580231 KIF21BO75037 1637 aa14.28□□□□□ -0.12
SENP3-203ENST00000580231 TRIM26Q12899 539 aaPredicted RBP14.28□□□□□ -0.12
SENP3-203ENST00000580231 POTEJP0CG39 1038 aa14.26□□□□□ -0.13
SENP3-203ENST00000580231 IFNL1Q8IU54 200 aa14.26□□□□□ -0.13
SENP3-203ENST00000580231 DCAF8Q5TAQ9 597 aa14.25□□□□□ -0.13
SENP3-203ENST00000580231 POTEFA5A3E0 1075 aa14.24□□□□□ -0.13
SENP3-203ENST00000580231 PCGF6Q9BYE7 350 aa14.24□□□□□ -0.13
SENP3-203ENST00000580231 PDS5BQ9NTI5 1447 aa14.24□□□□□ -0.13
SENP3-203ENST00000580231 UBTFP17480 764 aaKnown RBP14.23□□□□□ -0.13
SENP3-203ENST00000580231 KIF27Q86VH2 1401 aa14.21□□□□□ -0.13
SENP3-203ENST00000580231 FANCD2Q9BXW9 1451 aa14.2□□□□□ -0.14
SENP3-203ENST00000580231 KLHL34Q8N239 644 aa14.2□□□□□ -0.14
SENP3-203ENST00000580231 CEP162Q5TB80 1403 aa14.2□□□□□ -0.14
SENP3-203ENST00000580231 PYGBP11216 843 aa14.18□□□□□ -0.14
SENP3-203ENST00000580231 TRIM35Q9UPQ4 493 aa14.18□□□□□ -0.14
SENP3-203ENST00000580231 MAMSTRQ6ZN01 415 aa14.17□□□□□ -0.14
SENP3-203ENST00000580231 ERICH3Q5RHP9 1530 aa14.16□□□□□ -0.14
SENP3-203ENST00000580231 MRC2Q9UBG0 1479 aa14.16□□□□□ -0.14
SENP3-203ENST00000580231 PRXQ9BXM0 1461 aa14.15□□□□□ -0.14
SENP3-203ENST00000580231 WDR62O43379 1518 aa14.15□□□□□ -0.14
SENP3-203ENST00000580231 TMEM106CQ9BVX2 250 aa14.14□□□□□ -0.15
SENP3-203ENST00000580231 COLQQ9Y215 455 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms