RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 TOP2BQ02880 1626 aa34.85■■■■□ 3.17
LIMD2-209ENST00000580222 BIVM-ERCC5R4GMW8 1640 aa34.81■■■■□ 3.16
LIMD2-209ENST00000580222 SUPT5HO00267 1087 aaKnown RBP34.8■■■■□ 3.16
LIMD2-209ENST00000580222 NPM1P06748 294 aaKnown RBP eCLIP34.77■■■■□ 3.16
LIMD2-209ENST00000580222 MAPKBP1O60336 1514 aa34.73■■■■□ 3.15
LIMD2-209ENST00000580222 DIP2BQ9P265 1576 aa34.72■■■■□ 3.15
LIMD2-209ENST00000580222 RUSC2Q8N2Y8 1516 aa34.68■■■■□ 3.14
LIMD2-209ENST00000580222 ADCY10Q96PN6 1610 aa34.68■■■■□ 3.14
LIMD2-209ENST00000580222 ILDR1Q86SU0 546 aaPredicted RBP34.64■■■■□ 3.14
LIMD2-209ENST00000580222 KDM6BO15054 1643 aa34.59■■■■□ 3.13
LIMD2-209ENST00000580222 KIAA0586Q9BVV6 1533 aa34.47■■■■□ 3.11
LIMD2-209ENST00000580222 TSPOAP1O95153 1857 aa34.45■■■■□ 3.11
LIMD2-209ENST00000580222 IGF1RP08069 1367 aa34.43■■■■□ 3.1
LIMD2-209ENST00000580222 TTBK1Q5TCY1 1321 aaPredicted RBP34.38■■■■□ 3.09
LIMD2-209ENST00000580222 PTPRGP23470 1445 aa34.36■■■■□ 3.09
LIMD2-209ENST00000580222 ASXL2Q76L83 1435 aa34.26■■■■□ 3.07
LIMD2-209ENST00000580222 ADGRL1O94910 1474 aa34.25■■■■□ 3.07
LIMD2-209ENST00000580222 COL17A1Q9UMD9 1497 aaPredicted RBP34.24■■■■□ 3.07
LIMD2-209ENST00000580222 ABCC2Q92887 1545 aa34.24■■■■□ 3.07
LIMD2-209ENST00000580222 PPRC1Q5VV67 1664 aaKnown RBP34.21■■■■□ 3.07
LIMD2-209ENST00000580222 TNIKQ9UKE5 1360 aa34.2■■■■□ 3.07
LIMD2-209ENST00000580222 KIF27Q86VH2 1401 aa34.19■■■■□ 3.06
LIMD2-209ENST00000580222 PLB1Q6P1J6 1458 aa34.16■■■■□ 3.06
LIMD2-209ENST00000580222 GLI2P10070 1586 aa34.15■■■■□ 3.06
LIMD2-209ENST00000580222 CUL7Q14999 1698 aa34.12■■■■□ 3.05
LIMD2-209ENST00000580222 CARMIL1Q5VZK9 1371 aa34.11■■■■□ 3.05
LIMD2-209ENST00000580222 CARMIL2Q6F5E8 1435 aa34.1■■■■□ 3.05
LIMD2-209ENST00000580222 UHRF1BP1LA0JNW5 1464 aa34.07■■■■□ 3.04
LIMD2-209ENST00000580222 UACAQ9BZF9 1416 aa34.04■■■■□ 3.04
LIMD2-209ENST00000580222 EPRSP07814 1512 aaKnown RBP34.03■■■■□ 3.04
LIMD2-209ENST00000580222 HECW2Q9P2P5 1572 aa34.02■■■■□ 3.04
LIMD2-209ENST00000580222 DISP1Q96F81 1524 aa33.99■■■■□ 3.03
LIMD2-209ENST00000580222 KDM5BQ9UGL1 1544 aa33.94■■■■□ 3.02
LIMD2-209ENST00000580222 IQGAP2Q13576 1575 aa33.94■■■■□ 3.02
LIMD2-209ENST00000580222 MAP3K4Q9Y6R4 1608 aa33.93■■■■□ 3.02
LIMD2-209ENST00000580222 TEX14Q8IWB6 1497 aa33.86■■■■□ 3.01
LIMD2-209ENST00000580222 ZCCHC11Q5TAX3 1644 aaKnown RBP33.81■■■■□ 3
LIMD2-209ENST00000580222 UGGT2Q9NYU1 1516 aa33.75■■■□□ 2.99
LIMD2-209ENST00000580222 WDR7Q9Y4E6 1490 aa33.72■■■□□ 2.99
LIMD2-209ENST00000580222 KCNH8Q96L42 1107 aa33.67■■■□□ 2.98
LIMD2-209ENST00000580222 KIAA0556O60303 1618 aa33.67■■■□□ 2.98
LIMD2-209ENST00000580222 CD109Q6YHK3 1445 aa33.66■■■□□ 2.98
LIMD2-209ENST00000580222 RAPGEF2Q9Y4G8 1499 aa33.64■■■□□ 2.98
LIMD2-209ENST00000580222 MAGI3Q5TCQ9 1506 aa33.62■■■□□ 2.97
LIMD2-209ENST00000580222 FBXO41Q8TF61 875 aa33.58■■■□□ 2.97
LIMD2-209ENST00000580222 KIF21BO75037 1637 aa33.48■■■□□ 2.95
LIMD2-209ENST00000580222 ABCA8O94911 1581 aa33.47■■■□□ 2.95
LIMD2-209ENST00000580222 CFAP43Q8NDM7 1665 aa33.45■■■□□ 2.95
LIMD2-209ENST00000580222 ARID3CA6NKF2 412 aa33.4■■■□□ 2.94
LIMD2-209ENST00000580222 ARAP3Q8WWN8 1544 aa33.39■■■□□ 2.94
LIMD2-209ENST00000580222 PTPRMP28827 1452 aa33.37■■■□□ 2.93
LIMD2-209ENST00000580222 GOLGA3Q08378 1498 aa33.33■■■□□ 2.93
LIMD2-209ENST00000580222 RAPGEF3O95398 923 aa33.32■■■□□ 2.92
LIMD2-209ENST00000580222 ADAMTSL3P82987 1691 aa33.28■■■□□ 2.92
LIMD2-209ENST00000580222 ATP10BO94823 1461 aa33.27■■■□□ 2.92
LIMD2-209ENST00000580222 P3H3Q8IVL6 736 aa33.24■■■□□ 2.91
LIMD2-209ENST00000580222 CTTNBP2Q8WZ74 1663 aa33.23■■■□□ 2.91
LIMD2-209ENST00000580222 PHLDB1Q86UU1 1377 aa33.16■■■□□ 2.9
LIMD2-209ENST00000580222 LMTK3Q96Q04 1460 aa33.15■■■□□ 2.9
LIMD2-209ENST00000580222 PRXQ9BXM0 1461 aa33.14■■■□□ 2.9
LIMD2-209ENST00000580222 ARID4BQ4LE39 1312 aaPredicted RBP33.13■■■□□ 2.89
LIMD2-209ENST00000580222 ABCA9Q8IUA7 1624 aa33.13■■■□□ 2.89
LIMD2-209ENST00000580222 PCF11O94913 1555 aaKnown RBP33.13■■■□□ 2.89
LIMD2-209ENST00000580222 MADDQ8WXG6 1647 aa33.1■■■□□ 2.89
LIMD2-209ENST00000580222 FRMPD1Q5SYB0 1578 aa33.09■■■□□ 2.89
LIMD2-209ENST00000580222 BCORL1Q5H9F3 1711 aa33.08■■■□□ 2.89
LIMD2-209ENST00000580222 NEO1Q92859 1461 aa33.07■■■□□ 2.88
LIMD2-209ENST00000580222 HSPA2P54652 639 aa33.07■■■□□ 2.88
LIMD2-209ENST00000580222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.97■■■□□ 2.87
LIMD2-209ENST00000580222 HNRNPUL2Q1KMD3 747 aaKnown RBP32.97■■■□□ 2.87
LIMD2-209ENST00000580222 PLPPR3Q6T4P5 718 aa32.97■■■□□ 2.87
LIMD2-209ENST00000580222 FAM9AQ8IZU1 332 aaPredicted RBP32.96■■■□□ 2.87
LIMD2-209ENST00000580222 RIMS1Q86UR5 1692 aaKnown RBP32.91■■■□□ 2.86
LIMD2-209ENST00000580222 CERKQ8TCT0 537 aa32.9■■■□□ 2.86
LIMD2-209ENST00000580222 NUP153P49790 1475 aaKnown RBP32.88■■■□□ 2.85
LIMD2-209ENST00000580222 ARHGEF40Q8TER5 1519 aa32.87■■■□□ 2.85
LIMD2-209ENST00000580222 DENND4BO75064 1496 aaPredicted RBP32.87■■■□□ 2.85
LIMD2-209ENST00000580222 RAPGEF6Q8TEU7 1601 aa32.87■■■□□ 2.85
LIMD2-209ENST00000580222 SAMD9Q5K651 1589 aa32.84■■■□□ 2.85
LIMD2-209ENST00000580222 FHOD3Q2V2M9 1422 aa32.84■■■□□ 2.85
LIMD2-209ENST00000580222 AKNAQ7Z591 1439 aa32.84■■■□□ 2.85
LIMD2-209ENST00000580222 YEATS2Q9ULM3 1422 aa32.81■■■□□ 2.84
LIMD2-209ENST00000580222 SIGLEC1Q9BZZ2 1709 aa32.8■■■□□ 2.84
LIMD2-209ENST00000580222 RICTORQ6R327 1708 aa32.78■■■□□ 2.84
LIMD2-209ENST00000580222 MLECQ14165 292 aa32.78■■■□□ 2.84
LIMD2-209ENST00000580222 RANGAP1P46060 587 aaPredicted RBP32.77■■■□□ 2.84
LIMD2-209ENST00000580222 PLEKHD1A6NEE1 506 aa32.76■■■□□ 2.83
LIMD2-209ENST00000580222 ILDR2Q71H61 639 aa32.76■■■□□ 2.83
LIMD2-209ENST00000580222 FANCAO15360 1455 aa32.75■■■□□ 2.83
LIMD2-209ENST00000580222 POGZQ7Z3K3 1410 aa32.72■■■□□ 2.83
LIMD2-209ENST00000580222 CSRNP3Q8WYN3 585 aa32.71■■■□□ 2.83
LIMD2-209ENST00000580222 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.7■■■□□ 2.83
LIMD2-209ENST00000580222 ZMYM4Q5VZL5 1548 aa32.68■■■□□ 2.82
LIMD2-209ENST00000580222 ZFYVE16Q7Z3T8 1539 aa32.67■■■□□ 2.82
LIMD2-209ENST00000580222 TTC37Q6PGP7 1564 aa32.63■■■□□ 2.81
LIMD2-209ENST00000580222 CEBPAP49715 358 aaPredicted RBP32.63■■■□□ 2.81
LIMD2-209ENST00000580222 DISP3Q9P2K9 1392 aa32.61■■■□□ 2.81
LIMD2-209ENST00000580222 HECW1Q76N89 1606 aa32.6■■■□□ 2.81
LIMD2-209ENST00000580222 EFCAB5A4FU69 1503 aa32.6■■■□□ 2.81
LIMD2-209ENST00000580222 MAGI2Q86UL8 1455 aa32.6■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms