RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 KIF27Q86VH2 1401 aa31.25■■■□□ 2.59
MKS1-209ENST00000580127 IGF1RP08069 1367 aa31.21■■■□□ 2.59
MKS1-209ENST00000580127 RUSC2Q8N2Y8 1516 aa31.19■■■□□ 2.58
MKS1-209ENST00000580127 KIAA0586Q9BVV6 1533 aa31.17■■■□□ 2.58
MKS1-209ENST00000580127 FAM69CQ0P6D2 419 aa31.14■■■□□ 2.58
MKS1-209ENST00000580127 CUL7Q14999 1698 aa31.13■■■□□ 2.57
MKS1-209ENST00000580127 KIF13AQ9H1H9 1805 aa31.1■■■□□ 2.57
MKS1-209ENST00000580127 CARMIL1Q5VZK9 1371 aa31.05■■■□□ 2.56
MKS1-209ENST00000580127 ABCC10Q5T3U5 1492 aa31.03■■■□□ 2.56
MKS1-209ENST00000580127 MAPKBP1O60336 1514 aa31.01■■■□□ 2.55
MKS1-209ENST00000580127 PTPRGP23470 1445 aa30.97■■■□□ 2.55
MKS1-209ENST00000580127 CARMIL2Q6F5E8 1435 aa30.97■■■□□ 2.55
MKS1-209ENST00000580127 ADCY10Q96PN6 1610 aa30.96■■■□□ 2.55
MKS1-209ENST00000580127 TTBK1Q5TCY1 1321 aaPredicted RBP30.92■■■□□ 2.54
MKS1-209ENST00000580127 TNIKQ9UKE5 1360 aa30.88■■■□□ 2.53
MKS1-209ENST00000580127 DIP2BQ9P265 1576 aa30.87■■■□□ 2.53
MKS1-209ENST00000580127 IQGAP2Q13576 1575 aa30.79■■■□□ 2.52
MKS1-209ENST00000580127 TSPOAP1O95153 1857 aa30.74■■■□□ 2.51
MKS1-209ENST00000580127 ABCC2Q92887 1545 aa30.74■■■□□ 2.51
MKS1-209ENST00000580127 KDM6BO15054 1643 aa30.72■■■□□ 2.51
MKS1-209ENST00000580127 PLB1Q6P1J6 1458 aa30.71■■■□□ 2.51
MKS1-209ENST00000580127 RAPGEF2Q9Y4G8 1499 aa30.71■■■□□ 2.51
MKS1-209ENST00000580127 UACAQ9BZF9 1416 aa30.69■■■□□ 2.5
MKS1-209ENST00000580127 UHRF1BP1LA0JNW5 1464 aa30.68■■■□□ 2.5
MKS1-209ENST00000580127 ASXL2Q76L83 1435 aa30.66■■■□□ 2.5
MKS1-209ENST00000580127 DISP1Q96F81 1524 aa30.61■■■□□ 2.49
MKS1-209ENST00000580127 UGGT2Q9NYU1 1516 aa30.58■■■□□ 2.49
MKS1-209ENST00000580127 GLI2P10070 1586 aa30.58■■■□□ 2.49
MKS1-209ENST00000580127 FAM9AQ8IZU1 332 aaPredicted RBP30.55■■■□□ 2.48
MKS1-209ENST00000580127 KDM5BQ9UGL1 1544 aa30.52■■■□□ 2.48
MKS1-209ENST00000580127 KDM4FA0A1W2PPD8 638 aa30.49■■■□□ 2.47
MKS1-209ENST00000580127 KIAA0556O60303 1618 aa30.47■■■□□ 2.47
MKS1-209ENST00000580127 GOLGA3Q08378 1498 aa30.46■■■□□ 2.47
MKS1-209ENST00000580127 EPRSP07814 1512 aaKnown RBP30.44■■■□□ 2.46
MKS1-209ENST00000580127 TEX14Q8IWB6 1497 aa30.43■■■□□ 2.46
MKS1-209ENST00000580127 ZCCHC11Q5TAX3 1644 aaKnown RBP30.4■■■□□ 2.46
MKS1-209ENST00000580127 CTTNBP2Q8WZ74 1663 aa30.39■■■□□ 2.46
MKS1-209ENST00000580127 PPRC1Q5VV67 1664 aaKnown RBP30.38■■■□□ 2.45
MKS1-209ENST00000580127 MAP3K4Q9Y6R4 1608 aa30.35■■■□□ 2.45
MKS1-209ENST00000580127 WDR7Q9Y4E6 1490 aa30.32■■■□□ 2.44
MKS1-209ENST00000580127 KCNH8Q96L42 1107 aa30.31■■■□□ 2.44
MKS1-209ENST00000580127 PRXQ9BXM0 1461 aa30.29■■■□□ 2.44
MKS1-209ENST00000580127 COL17A1Q9UMD9 1497 aaPredicted RBP30.24■■■□□ 2.43
MKS1-209ENST00000580127 CD109Q6YHK3 1445 aa30.23■■■□□ 2.43
MKS1-209ENST00000580127 ABCA8O94911 1581 aa30.21■■■□□ 2.43
MKS1-209ENST00000580127 ADGRL1O94910 1474 aa30.19■■■□□ 2.42
MKS1-209ENST00000580127 CSRNP3Q8WYN3 585 aa30.18■■■□□ 2.42
MKS1-209ENST00000580127 MAGI3Q5TCQ9 1506 aa30.16■■■□□ 2.42
MKS1-209ENST00000580127 CFAP43Q8NDM7 1665 aa30.15■■■□□ 2.42
MKS1-209ENST00000580127 P3H3Q8IVL6 736 aa30.15■■■□□ 2.42
MKS1-209ENST00000580127 ARID3CA6NKF2 412 aa30.06■■■□□ 2.4
MKS1-209ENST00000580127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.04■■■□□ 2.4
MKS1-209ENST00000580127 HNRNPUL2Q1KMD3 747 aaKnown RBP30.04■■■□□ 2.4
MKS1-209ENST00000580127 ATP10BO94823 1461 aa30.02■■■□□ 2.4
MKS1-209ENST00000580127 PHLDB1Q86UU1 1377 aa30.01■■■□□ 2.39
MKS1-209ENST00000580127 EEA1Q15075 1411 aa29.99■■■□□ 2.39
MKS1-209ENST00000580127 ARAP3Q8WWN8 1544 aa29.94■■■□□ 2.38
MKS1-209ENST00000580127 RANGAP1P46060 587 aaPredicted RBP29.92■■■□□ 2.38
MKS1-209ENST00000580127 SAMD9Q5K651 1589 aa29.91■■■□□ 2.38
MKS1-209ENST00000580127 RAPGEF6Q8TEU7 1601 aa29.89■■■□□ 2.38
MKS1-209ENST00000580127 ABCA9Q8IUA7 1624 aa29.86■■■□□ 2.37
MKS1-209ENST00000580127 PLEKHD1A6NEE1 506 aa29.86■■■□□ 2.37
MKS1-209ENST00000580127 NEO1Q92859 1461 aa29.81■■■□□ 2.36
MKS1-209ENST00000580127 RAPGEF3O95398 923 aa29.79■■■□□ 2.36
MKS1-209ENST00000580127 HECW2Q9P2P5 1572 aa29.78■■■□□ 2.36
MKS1-209ENST00000580127 ILDR1Q86SU0 546 aaPredicted RBP29.77■■■□□ 2.36
MKS1-209ENST00000580127 KIF21BO75037 1637 aa29.76■■■□□ 2.35
MKS1-209ENST00000580127 NUP153P49790 1475 aaKnown RBP29.74■■■□□ 2.35
MKS1-209ENST00000580127 FHOD3Q2V2M9 1422 aa29.74■■■□□ 2.35
MKS1-209ENST00000580127 ARID4BQ4LE39 1312 aaPredicted RBP29.72■■■□□ 2.35
MKS1-209ENST00000580127 EFCAB5A4FU69 1503 aa29.68■■■□□ 2.34
MKS1-209ENST00000580127 UBTFP17480 764 aaKnown RBP29.65■■■□□ 2.34
MKS1-209ENST00000580127 DENND4BO75064 1496 aaPredicted RBP29.61■■■□□ 2.33
MKS1-209ENST00000580127 AKNAQ7Z591 1439 aa29.6■■■□□ 2.33
MKS1-209ENST00000580127 ATP1B4Q9UN42 357 aaPredicted RBP29.58■■■□□ 2.33
MKS1-209ENST00000580127 CFAP74Q9C0B2 1584 aa29.57■■■□□ 2.32
MKS1-209ENST00000580127 FANCAO15360 1455 aa29.57■■■□□ 2.32
MKS1-209ENST00000580127 PTPRMP28827 1452 aa29.57■■■□□ 2.32
MKS1-209ENST00000580127 CDK11AQ9UQ88 783 aaPredicted RBP29.57■■■□□ 2.32
MKS1-209ENST00000580127 ADAMTSL3P82987 1691 aa29.56■■■□□ 2.32
MKS1-209ENST00000580127 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.52■■■□□ 2.32
MKS1-209ENST00000580127 EHMT2Q96KQ7 1210 aa29.51■■■□□ 2.31
MKS1-209ENST00000580127 FMN1Q68DA7 1419 aa29.5■■■□□ 2.31
MKS1-209ENST00000580127 POGZQ7Z3K3 1410 aa29.5■■■□□ 2.31
MKS1-209ENST00000580127 FRMPD1Q5SYB0 1578 aa29.5■■■□□ 2.31
MKS1-209ENST00000580127 BCORL1Q5H9F3 1711 aa29.5■■■□□ 2.31
MKS1-209ENST00000580127 RICTORQ6R327 1708 aa29.45■■■□□ 2.31
MKS1-209ENST00000580127 EFCAB2Q5VUJ9 269 aa29.45■■■□□ 2.31
MKS1-209ENST00000580127 MAGI2Q86UL8 1455 aa29.43■■■□□ 2.3
MKS1-209ENST00000580127 ARHGEF40Q8TER5 1519 aa29.43■■■□□ 2.3
MKS1-209ENST00000580127 PLCH2O75038 1416 aa29.43■■■□□ 2.3
MKS1-209ENST00000580127 TTC37Q6PGP7 1564 aa29.42■■■□□ 2.3
MKS1-209ENST00000580127 CDK13Q14004 1512 aaKnown RBP29.41■■■□□ 2.3
MKS1-209ENST00000580127 MADDQ8WXG6 1647 aa29.4■■■□□ 2.3
MKS1-209ENST00000580127 SCAPERQ9BY12 1400 aa29.39■■■□□ 2.3
MKS1-209ENST00000580127 CHIC1Q5VXU3 224 aa29.39■■■□□ 2.3
MKS1-209ENST00000580127 ZFYVE16Q7Z3T8 1539 aa29.38■■■□□ 2.29
MKS1-209ENST00000580127 HECW1Q76N89 1606 aa29.38■■■□□ 2.29
MKS1-209ENST00000580127 ZMYM4Q5VZL5 1548 aa29.37■■■□□ 2.29
MKS1-209ENST00000580127 FBXO41Q8TF61 875 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms