RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 BAZ1AQ9NRL2 1556 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC8-207ENST00000580104 RBM19Q9Y4C8 960 aaKnown RBP18.41■□□□□ 0.54
TRAPPC8-207ENST00000580104 VPS8Q8N3P4 1428 aa18.4■□□□□ 0.54
TRAPPC8-207ENST00000580104 CCNB3Q8WWL7 1395 aa18.4■□□□□ 0.54
TRAPPC8-207ENST00000580104 NACADO15069 1562 aa18.4■□□□□ 0.54
TRAPPC8-207ENST00000580104 KCNH8Q96L42 1107 aa18.4■□□□□ 0.54
TRAPPC8-207ENST00000580104 CANXP27824 592 aaKnown RBP18.38■□□□□ 0.53
TRAPPC8-207ENST00000580104 EIF5BO60841 1220 aaKnown RBP18.38■□□□□ 0.53
TRAPPC8-207ENST00000580104 BCL11AQ9H165 835 aa18.36■□□□□ 0.53
TRAPPC8-207ENST00000580104 WIZO95785 1651 aa18.36■□□□□ 0.53
TRAPPC8-207ENST00000580104 KDM2AQ9Y2K7 1162 aa18.35■□□□□ 0.53
TRAPPC8-207ENST00000580104 B4GALNT3Q6L9W6 998 aa18.34■□□□□ 0.53
TRAPPC8-207ENST00000580104 RUSC2Q8N2Y8 1516 aa18.31■□□□□ 0.52
TRAPPC8-207ENST00000580104 KIF27Q86VH2 1401 aa18.3■□□□□ 0.52
TRAPPC8-207ENST00000580104 BAZ1BQ9UIG0 1483 aaKnown RBP18.29■□□□□ 0.52
TRAPPC8-207ENST00000580104 PPP4R2Q9NY27 417 aa18.27■□□□□ 0.51
TRAPPC8-207ENST00000580104 RAB3GAP2Q9H2M9 1393 aa18.24■□□□□ 0.51
TRAPPC8-207ENST00000580104 CCER2I3L3R5 266 aa18.21■□□□□ 0.51
TRAPPC8-207ENST00000580104 ARXQ96QS3 562 aa18.2■□□□□ 0.5
TRAPPC8-207ENST00000580104 DHX57Q6P158 1386 aaKnown RBP18.2■□□□□ 0.5
TRAPPC8-207ENST00000580104 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.19■□□□□ 0.53e-6■□□□□ 9.2
TRAPPC8-207ENST00000580104 SETD5Q9C0A6 1442 aa18.19■□□□□ 0.5
TRAPPC8-207ENST00000580104 NOP58Q9Y2X3 529 aaKnown RBP18.16■□□□□ 0.5
TRAPPC8-207ENST00000580104 RTN4Q9NQC3 1192 aaKnown RBP18.15■□□□□ 0.5
TRAPPC8-207ENST00000580104 LAS1LQ9Y4W2 734 aaKnown RBP18.15■□□□□ 0.5
TRAPPC8-207ENST00000580104 RAPGEF2Q9Y4G8 1499 aa18.15■□□□□ 0.5
TRAPPC8-207ENST00000580104 HSPA5P11021 654 aaKnown RBP18.12■□□□□ 0.49
TRAPPC8-207ENST00000580104 TIMELESSQ9UNS1 1208 aa18.11■□□□□ 0.49
TRAPPC8-207ENST00000580104 PPP1R15AO75807 674 aaPredicted RBP18.11■□□□□ 0.49
TRAPPC8-207ENST00000580104 DEKP35659 375 aaKnown RBP18.1■□□□□ 0.49
TRAPPC8-207ENST00000580104 FOXD1Q16676 465 aa18.1■□□□□ 0.49
TRAPPC8-207ENST00000580104 WDR43Q15061 677 aaKnown RBP eCLIP18.09■□□□□ 0.49
TRAPPC8-207ENST00000580104 RGL3Q3MIN7 710 aa18.09■□□□□ 0.49
TRAPPC8-207ENST00000580104 CARMIL1Q5VZK9 1371 aa18.08■□□□□ 0.48
TRAPPC8-207ENST00000580104 TSPY4P0CV99 314 aa18.08■□□□□ 0.48
TRAPPC8-207ENST00000580104 TSPY10P0CW01 314 aa18.08■□□□□ 0.48
TRAPPC8-207ENST00000580104 TOP2AP11388 1531 aaKnown RBP18.07■□□□□ 0.48
TRAPPC8-207ENST00000580104 CUX2O14529 1486 aa18.06■□□□□ 0.48
TRAPPC8-207ENST00000580104 CARD11Q9BXL7 1154 aa18.05■□□□□ 0.48
TRAPPC8-207ENST00000580104 NEFMP07197 916 aa18.04■□□□□ 0.48
TRAPPC8-207ENST00000580104 UPF2Q9HAU5 1272 aaKnown RBP18.04■□□□□ 0.48
TRAPPC8-207ENST00000580104 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC8-207ENST00000580104 FHAD1B1AJZ9 1412 aa18.02■□□□□ 0.48
TRAPPC8-207ENST00000580104 CHGAP10645 457 aaKnown RBP18.02■□□□□ 0.47
TRAPPC8-207ENST00000580104 HSP90AA1P07900 732 aaKnown RBP17.98■□□□□ 0.47
TRAPPC8-207ENST00000580104 CFDP1Q9UEE9 299 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC8-207ENST00000580104 ARHGAP35Q9NRY4 1499 aa17.96■□□□□ 0.47
TRAPPC8-207ENST00000580104 DDRGK1Q96HY6 314 aa17.95■□□□□ 0.46
TRAPPC8-207ENST00000580104 RGS3P49796 1198 aa17.94■□□□□ 0.46
TRAPPC8-207ENST00000580104 CC2D1BQ5T0F9 858 aaKnown RBP17.93■□□□□ 0.46
TRAPPC8-207ENST00000580104 PPM1GO15355 546 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC8-207ENST00000580104 L3MBTL2Q969R5 705 aa17.89■□□□□ 0.45
TRAPPC8-207ENST00000580104 SLC24A1O60721 1099 aa17.88■□□□□ 0.45
TRAPPC8-207ENST00000580104 CHMP7Q8WUX9 453 aaPredicted RBP17.88■□□□□ 0.45
TRAPPC8-207ENST00000580104 MPHOSPH9Q99550 1183 aa17.87■□□□□ 0.45
TRAPPC8-207ENST00000580104 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
TRAPPC8-207ENST00000580104 ERICH6BQ5W0A0 696 aa17.86■□□□□ 0.45
TRAPPC8-207ENST00000580104 DCAF11Q8TEB1 546 aa17.86■□□□□ 0.45
TRAPPC8-207ENST00000580104 NEUROD2Q15784 382 aa17.84■□□□□ 0.45
TRAPPC8-207ENST00000580104 PLEKHD1A6NEE1 506 aa17.84■□□□□ 0.45
TRAPPC8-207ENST00000580104 FHOD3Q2V2M9 1422 aa17.84■□□□□ 0.45
TRAPPC8-207ENST00000580104 KNSTRNQ9Y448 316 aa17.83■□□□□ 0.45
TRAPPC8-207ENST00000580104 SMARCA4P51532 1647 aa17.83■□□□□ 0.44
TRAPPC8-207ENST00000580104 ANP32BQ92688 251 aaKnown RBP17.82■□□□□ 0.44
TRAPPC8-207ENST00000580104 SMARCA2P51531 1590 aa17.81■□□□□ 0.44
TRAPPC8-207ENST00000580104 BECN1Q14457 450 aa17.79■□□□□ 0.44
TRAPPC8-207ENST00000580104 PKD2Q13563 968 aa17.78■□□□□ 0.44
TRAPPC8-207ENST00000580104 KIF21BO75037 1637 aa17.78■□□□□ 0.44
TRAPPC8-207ENST00000580104 NUDCQ9Y266 331 aa17.78■□□□□ 0.44
TRAPPC8-207ENST00000580104 IPO9Q96P70 1041 aaKnown RBP17.77■□□□□ 0.44
TRAPPC8-207ENST00000580104 EIF4G1Q04637 1599 aaKnown RBP17.77■□□□□ 0.44
TRAPPC8-207ENST00000580104 RCAN3Q9UKA8 241 aa17.77■□□□□ 0.44
TRAPPC8-207ENST00000580104 FRAT1Q92837 279 aaPredicted RBP17.76■□□□□ 0.43
TRAPPC8-207ENST00000580104 PRKRIP1Q9H875 184 aaPredicted RBP17.76■□□□□ 0.43
TRAPPC8-207ENST00000580104 FMN1Q68DA7 1419 aa17.75■□□□□ 0.43
TRAPPC8-207ENST00000580104 TNNT2P45379 298 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC8-207ENST00000580104 TDRD9Q8NDG6 1382 aaKnown RBP17.72■□□□□ 0.43
TRAPPC8-207ENST00000580104 FANCIQ9NVI1 1328 aa17.71■□□□□ 0.43
TRAPPC8-207ENST00000580104 ATAD2BQ9ULI0 1458 aa17.71■□□□□ 0.43
TRAPPC8-207ENST00000580104 GLIPR1L2Q4G1C9 344 aa17.71■□□□□ 0.43
TRAPPC8-207ENST00000580104 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.7■□□□□ 0.42
TRAPPC8-207ENST00000580104 PHLDB1Q86UU1 1377 aa17.68■□□□□ 0.42
TRAPPC8-207ENST00000580104 TCERG1O14776 1098 aaKnown RBP17.67■□□□□ 0.42
TRAPPC8-207ENST00000580104 SPRYD3Q8NCJ5 442 aa17.65■□□□□ 0.42
TRAPPC8-207ENST00000580104 ZBED9Q6R2W3 1325 aa17.65■□□□□ 0.42
TRAPPC8-207ENST00000580104 CCDC18Q5T9S5 1454 aa17.64■□□□□ 0.41
TRAPPC8-207ENST00000580104 TMF1P82094 1093 aa17.64■□□□□ 0.41
TRAPPC8-207ENST00000580104 ARAP1Q96P48 1450 aa17.64■□□□□ 0.41
TRAPPC8-207ENST00000580104 TRIM44Q96DX7 344 aaPredicted RBP17.63■□□□□ 0.41
TRAPPC8-207ENST00000580104 KTN1Q86UP2 1357 aaKnown RBP17.63■□□□□ 0.41
TRAPPC8-207ENST00000580104 CDCA8Q53HL2 280 aa17.63■□□□□ 0.41
TRAPPC8-207ENST00000580104 FTSJ3Q8IY81 847 aaKnown RBP17.63■□□□□ 0.41
TRAPPC8-207ENST00000580104 PLIN1O60240 522 aa17.62■□□□□ 0.41
TRAPPC8-207ENST00000580104 EXOC6Q8TAG9 804 aa17.62■□□□□ 0.41
TRAPPC8-207ENST00000580104 STAG3Q9UJ98 1225 aa17.62■□□□□ 0.41
TRAPPC8-207ENST00000580104 SLC4A3P48751 1232 aa17.61■□□□□ 0.41
TRAPPC8-207ENST00000580104 NAP1L5Q96NT1 182 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC8-207ENST00000580104 RALBP1Q15311 655 aa17.6■□□□□ 0.41
TRAPPC8-207ENST00000580104 NUP155O75694 1391 aa17.59■□□□□ 0.41
TRAPPC8-207ENST00000580104 WASHC2AQ641Q2 1341 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms