RNA–Protein interactions for RNA: ENST00000579618.1

SNRPD1-203, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 5 BASIC

Gene SNRPD1, Length 320 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-203ENST00000579618 MAPKBP1O60336 1514 aa18.21■□□□□ 0.51
SNRPD1-203ENST00000579618 WRNQ14191 1432 aaPredicted RBP eCLIP18.2■□□□□ 0.5
SNRPD1-203ENST00000579618 BIVM-ERCC5R4GMW8 1640 aa18.2■□□□□ 0.5
SNRPD1-203ENST00000579618 ADCY10Q96PN6 1610 aa18.19■□□□□ 0.5
SNRPD1-203ENST00000579618 ERICH3Q5RHP9 1530 aa18.18■□□□□ 0.5
SNRPD1-203ENST00000579618 RUSC2Q8N2Y8 1516 aa18.18■□□□□ 0.5
SNRPD1-203ENST00000579618 TOP2BQ02880 1626 aa18.16■□□□□ 0.5
SNRPD1-203ENST00000579618 TSPOAP1O95153 1857 aa18.16■□□□□ 0.5
SNRPD1-203ENST00000579618 SUPT5HO00267 1087 aaKnown RBP18.13■□□□□ 0.49
SNRPD1-203ENST00000579618 JPH4Q96JJ6 628 aa18.12■□□□□ 0.49
SNRPD1-203ENST00000579618 NPM1P06748 294 aaKnown RBP eCLIP18.08■□□□□ 0.48
SNRPD1-203ENST00000579618 PPRC1Q5VV67 1664 aaKnown RBP18.01■□□□□ 0.47
SNRPD1-203ENST00000579618 ADGRL1O94910 1474 aa18.01■□□□□ 0.47
SNRPD1-203ENST00000579618 HECW2Q9P2P5 1572 aa17.96■□□□□ 0.47
SNRPD1-203ENST00000579618 KIAA0586Q9BVV6 1533 aa17.93■□□□□ 0.46
SNRPD1-203ENST00000579618 CUL7Q14999 1698 aa17.9■□□□□ 0.46
SNRPD1-203ENST00000579618 GLI2P10070 1586 aa17.89■□□□□ 0.45
SNRPD1-203ENST00000579618 ABCC2Q92887 1545 aa17.87■□□□□ 0.45
SNRPD1-203ENST00000579618 ASXL2Q76L83 1435 aa17.86■□□□□ 0.45
SNRPD1-203ENST00000579618 COL17A1Q9UMD9 1497 aaPredicted RBP17.86■□□□□ 0.45
SNRPD1-203ENST00000579618 PTPRGP23470 1445 aa17.84■□□□□ 0.45
SNRPD1-203ENST00000579618 TTBK1Q5TCY1 1321 aaPredicted RBP17.83■□□□□ 0.44
SNRPD1-203ENST00000579618 MAP3K4Q9Y6R4 1608 aa17.83■□□□□ 0.44
SNRPD1-203ENST00000579618 PLB1Q6P1J6 1458 aa17.82■□□□□ 0.44
SNRPD1-203ENST00000579618 IGF1RP08069 1367 aa17.78■□□□□ 0.44
SNRPD1-203ENST00000579618 TNIKQ9UKE5 1360 aa17.78■□□□□ 0.44
SNRPD1-203ENST00000579618 EPRSP07814 1512 aaKnown RBP17.77■□□□□ 0.43
SNRPD1-203ENST00000579618 UHRF1BP1LA0JNW5 1464 aa17.75■□□□□ 0.43
SNRPD1-203ENST00000579618 IQGAP2Q13576 1575 aa17.74■□□□□ 0.43
SNRPD1-203ENST00000579618 CARMIL2Q6F5E8 1435 aa17.73■□□□□ 0.43
SNRPD1-203ENST00000579618 ZCCHC11Q5TAX3 1644 aaKnown RBP17.73■□□□□ 0.43
SNRPD1-203ENST00000579618 TEX14Q8IWB6 1497 aa17.73■□□□□ 0.43
SNRPD1-203ENST00000579618 KIF27Q86VH2 1401 aa17.72■□□□□ 0.43
SNRPD1-203ENST00000579618 UACAQ9BZF9 1416 aa17.71■□□□□ 0.43
SNRPD1-203ENST00000579618 KDM5BQ9UGL1 1544 aa17.7■□□□□ 0.42
SNRPD1-203ENST00000579618 DISP1Q96F81 1524 aa17.69■□□□□ 0.42
SNRPD1-203ENST00000579618 KIF21BO75037 1637 aa17.65■□□□□ 0.42
SNRPD1-203ENST00000579618 CARMIL1Q5VZK9 1371 aa17.65■□□□□ 0.42
SNRPD1-203ENST00000579618 FBXO41Q8TF61 875 aa17.63■□□□□ 0.41
SNRPD1-203ENST00000579618 WDR7Q9Y4E6 1490 aa17.61■□□□□ 0.41
SNRPD1-203ENST00000579618 KIAA0556O60303 1618 aa17.61■□□□□ 0.41
SNRPD1-203ENST00000579618 CFAP43Q8NDM7 1665 aa17.59■□□□□ 0.41
SNRPD1-203ENST00000579618 UGGT2Q9NYU1 1516 aa17.57■□□□□ 0.4
SNRPD1-203ENST00000579618 MAGI3Q5TCQ9 1506 aa17.55■□□□□ 0.4
SNRPD1-203ENST00000579618 CD109Q6YHK3 1445 aa17.52■□□□□ 0.4
SNRPD1-203ENST00000579618 ADAMTSL3P82987 1691 aa17.49■□□□□ 0.39
SNRPD1-203ENST00000579618 PTPRMP28827 1452 aa17.48■□□□□ 0.39
SNRPD1-203ENST00000579618 ABCA8O94911 1581 aa17.46■□□□□ 0.39
SNRPD1-203ENST00000579618 RAPGEF2Q9Y4G8 1499 aa17.45■□□□□ 0.38
SNRPD1-203ENST00000579618 KCNH8Q96L42 1107 aa17.44■□□□□ 0.38
SNRPD1-203ENST00000579618 CTTNBP2Q8WZ74 1663 aa17.44■□□□□ 0.38
SNRPD1-203ENST00000579618 PCF11O94913 1555 aaKnown RBP17.44■□□□□ 0.38
SNRPD1-203ENST00000579618 CHIC1Q5VXU3 224 aa17.43■□□□□ 0.38
SNRPD1-203ENST00000579618 ARAP3Q8WWN8 1544 aa17.42■□□□□ 0.38
SNRPD1-203ENST00000579618 MADDQ8WXG6 1647 aa17.42■□□□□ 0.38
SNRPD1-203ENST00000579618 BCORL1Q5H9F3 1711 aa17.41■□□□□ 0.38
SNRPD1-203ENST00000579618 LMTK3Q96Q04 1460 aa17.4■□□□□ 0.38
SNRPD1-203ENST00000579618 FRMPD1Q5SYB0 1578 aa17.36■□□□□ 0.37
SNRPD1-203ENST00000579618 ABCA9Q8IUA7 1624 aa17.35■□□□□ 0.37
SNRPD1-203ENST00000579618 RIMS1Q86UR5 1692 aaKnown RBP17.34■□□□□ 0.37
SNRPD1-203ENST00000579618 GOLGA3Q08378 1498 aa17.33■□□□□ 0.37
SNRPD1-203ENST00000579618 ARID3CA6NKF2 412 aa17.29■□□□□ 0.36
SNRPD1-203ENST00000579618 RAPGEF3O95398 923 aa17.29■□□□□ 0.36
SNRPD1-203ENST00000579618 ARHGEF40Q8TER5 1519 aa17.27■□□□□ 0.36
SNRPD1-203ENST00000579618 ATP10BO94823 1461 aa17.27■□□□□ 0.36
SNRPD1-203ENST00000579618 NEO1Q92859 1461 aa17.25■□□□□ 0.35
SNRPD1-203ENST00000579618 HSPA2P54652 639 aa17.25■□□□□ 0.35
SNRPD1-203ENST00000579618 PHLDB1Q86UU1 1377 aa17.25■□□□□ 0.35
SNRPD1-203ENST00000579618 ARID4BQ4LE39 1312 aaPredicted RBP17.24■□□□□ 0.35
SNRPD1-203ENST00000579618 SIGLEC1Q9BZZ2 1709 aa17.24■□□□□ 0.35
SNRPD1-203ENST00000579618 RICTORQ6R327 1708 aa17.21■□□□□ 0.35
SNRPD1-203ENST00000579618 ILDR2Q71H61 639 aa17.21■□□□□ 0.35
SNRPD1-203ENST00000579618 CERKQ8TCT0 537 aa17.2■□□□□ 0.34
SNRPD1-203ENST00000579618 PLPPR3Q6T4P5 718 aa17.18■□□□□ 0.34
SNRPD1-203ENST00000579618 RAPGEF6Q8TEU7 1601 aa17.18■□□□□ 0.34
SNRPD1-203ENST00000579618 DISP3Q9P2K9 1392 aa17.16■□□□□ 0.34
SNRPD1-203ENST00000579618 P3H3Q8IVL6 736 aa17.15■□□□□ 0.34
SNRPD1-203ENST00000579618 FER1L4A9Z1Z3 1794 aa17.15■□□□□ 0.34
SNRPD1-203ENST00000579618 FANCAO15360 1455 aa17.14■□□□□ 0.33
SNRPD1-203ENST00000579618 PRXQ9BXM0 1461 aa17.14■□□□□ 0.33
SNRPD1-203ENST00000579618 SAMD9Q5K651 1589 aa17.14■□□□□ 0.33
SNRPD1-203ENST00000579618 SOCS7O14512 581 aa17.13■□□□□ 0.33
SNRPD1-203ENST00000579618 TTC37Q6PGP7 1564 aa17.13■□□□□ 0.33
SNRPD1-203ENST00000579618 DENND4BO75064 1496 aaPredicted RBP17.12■□□□□ 0.33
SNRPD1-203ENST00000579618 ZMYM4Q5VZL5 1548 aa17.12■□□□□ 0.33
SNRPD1-203ENST00000579618 SPATA31D1Q6ZQQ2 1576 aa17.11■□□□□ 0.33
SNRPD1-203ENST00000579618 FHOD3Q2V2M9 1422 aa17.11■□□□□ 0.33
SNRPD1-203ENST00000579618 ZFYVE16Q7Z3T8 1539 aa17.11■□□□□ 0.33
SNRPD1-203ENST00000579618 CFAP74Q9C0B2 1584 aa17.11■□□□□ 0.33
SNRPD1-203ENST00000579618 YEATS2Q9ULM3 1422 aa17.1■□□□□ 0.33
SNRPD1-203ENST00000579618 POGZQ7Z3K3 1410 aa17.09■□□□□ 0.33
SNRPD1-203ENST00000579618 AKNAQ7Z591 1439 aa17.09■□□□□ 0.33
SNRPD1-203ENST00000579618 NUP153P49790 1475 aaKnown RBP17.09■□□□□ 0.33
SNRPD1-203ENST00000579618 PREX1Q8TCU6 1659 aa17.09■□□□□ 0.33
SNRPD1-203ENST00000579618 EFCAB5A4FU69 1503 aa17.08■□□□□ 0.32
SNRPD1-203ENST00000579618 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.07■□□□□ 0.32
SNRPD1-203ENST00000579618 HNRNPUL2Q1KMD3 747 aaKnown RBP17.07■□□□□ 0.32
SNRPD1-203ENST00000579618 STRCQ7RTU9 1775 aa17.06■□□□□ 0.32
SNRPD1-203ENST00000579618 HECW1Q76N89 1606 aa17.06■□□□□ 0.32
SNRPD1-203ENST00000579618 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.06■□□□□ 0.321e-17■□□□□ 8.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms