RNA–Protein interactions for RNA: ENST00000579146.5

PGAP3-206, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 2 BASIC

Gene PGAP3, Length 2,220 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-206ENST00000579146 FHAD1B1AJZ9 1412 aa28.55■■■□□ 2.16
PGAP3-206ENST00000579146 EFCAB5A4FU69 1503 aa28.53■■■□□ 2.16
PGAP3-206ENST00000579146 TARBP1Q13395 1621 aaKnown RBP28.51■■■□□ 2.15
PGAP3-206ENST00000579146 PCF11O94913 1555 aaKnown RBP28.48■■■□□ 2.15
PGAP3-206ENST00000579146 P3H3Q8IVL6 736 aa28.45■■■□□ 2.15
PGAP3-206ENST00000579146 FHOD3Q2V2M9 1422 aa28.45■■■□□ 2.15
PGAP3-206ENST00000579146 CCNB3Q8WWL7 1395 aa28.45■■■□□ 2.14
PGAP3-206ENST00000579146 LRRC9Q6ZRR7 1453 aa28.44■■■□□ 2.14
PGAP3-206ENST00000579146 CFAP43Q8NDM7 1665 aa28.44■■■□□ 2.14
PGAP3-206ENST00000579146 MRC2Q9UBG0 1479 aa28.4■■■□□ 2.14
PGAP3-206ENST00000579146 FYCO1Q9BQS8 1478 aa28.39■■■□□ 2.13
PGAP3-206ENST00000579146 AQRO60306 1485 aaKnown RBP eCLIP28.38■■■□□ 2.13
PGAP3-206ENST00000579146 CASKIN1Q8WXD9 1431 aa28.36■■■□□ 2.13
PGAP3-206ENST00000579146 SAMD9Q5K651 1589 aa28.33■■■□□ 2.13
PGAP3-206ENST00000579146 PBRM1Q86U86 1689 aa28.32■■■□□ 2.12
PGAP3-206ENST00000579146 FMN1Q68DA7 1419 aa28.31■■■□□ 2.12
PGAP3-206ENST00000579146 DHX57Q6P158 1386 aaKnown RBP28.29■■■□□ 2.12
PGAP3-206ENST00000579146 PHLDB1Q86UU1 1377 aa28.27■■■□□ 2.12
PGAP3-206ENST00000579146 CLSPNQ9HAW4 1339 aa28.27■■■□□ 2.12
PGAP3-206ENST00000579146 ATP1B4Q9UN42 357 aaPredicted RBP28.26■■■□□ 2.11
PGAP3-206ENST00000579146 SNAPC4Q5SXM2 1469 aa28.25■■■□□ 2.11
PGAP3-206ENST00000579146 WDR62O43379 1518 aa28.22■■■□□ 2.11
PGAP3-206ENST00000579146 ADAMTS12P58397 1594 aa28.2■■■□□ 2.11
PGAP3-206ENST00000579146 DIEXFQ68CQ4 756 aaKnown RBP28.2■■■□□ 2.1
PGAP3-206ENST00000579146 ZNF316A6NFI3 1004 aaPredicted RBP28.19■■■□□ 2.1
PGAP3-206ENST00000579146 ITGAEP38570 1179 aa28.18■■■□□ 2.1
PGAP3-206ENST00000579146 IFT140Q96RY7 1462 aa28.17■■■□□ 2.1
PGAP3-206ENST00000579146 GRIN2BQ13224 1484 aa28.17■■■□□ 2.1
PGAP3-206ENST00000579146 LRRIQ1Q96JM4 1722 aa28.12■■■□□ 2.09
PGAP3-206ENST00000579146 ZNF608Q9ULD9 1512 aaPredicted RBP28.11■■■□□ 2.09
PGAP3-206ENST00000579146 THOC2Q8NI27 1593 aaKnown RBP28.1■■■□□ 2.09
PGAP3-206ENST00000579146 IQGAP2Q13576 1575 aa28.09■■■□□ 2.09
PGAP3-206ENST00000579146 RAB3GAP2Q9H2M9 1393 aa28.07■■■□□ 2.08
PGAP3-206ENST00000579146 FAM50AQ14320 339 aaKnown RBP28.06■■■□□ 2.08
PGAP3-206ENST00000579146 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.04■■■□□ 2.08
PGAP3-206ENST00000579146 SETD5Q9C0A6 1442 aa28.03■■■□□ 2.08
PGAP3-206ENST00000579146 MTUS2Q5JR59 1369 aa28.02■■■□□ 2.08
PGAP3-206ENST00000579146 ERCC6Q03468 1493 aa28.01■■■□□ 2.07
PGAP3-206ENST00000579146 EIF4G3O43432 1585 aaKnown RBP27.98■■■□□ 2.07
PGAP3-206ENST00000579146 FGD6Q6ZV73 1430 aa27.97■■■□□ 2.07
PGAP3-206ENST00000579146 UGGT2Q9NYU1 1516 aa27.94■■■□□ 2.06
PGAP3-206ENST00000579146 EHBP1L1Q8N3D4 1523 aa27.94■■■□□ 2.06
PGAP3-206ENST00000579146 CCDC18Q5T9S5 1454 aa27.93■■■□□ 2.06
PGAP3-206ENST00000579146 NCOA2Q15596 1464 aa27.92■■■□□ 2.06
PGAP3-206ENST00000579146 HECW1Q76N89 1606 aa27.92■■■□□ 2.06
PGAP3-206ENST00000579146 SUPT6HQ7KZ85 1726 aaKnown RBP27.92■■■□□ 2.06
PGAP3-206ENST00000579146 MAPKBP1O60336 1514 aa27.91■■■□□ 2.06
PGAP3-206ENST00000579146 KIAA0586Q9BVV6 1533 aa27.88■■■□□ 2.05
PGAP3-206ENST00000579146 MAGI3Q5TCQ9 1506 aa27.87■■■□□ 2.05
PGAP3-206ENST00000579146 GRIN2AQ12879 1464 aa27.87■■■□□ 2.05
PGAP3-206ENST00000579146 MYOM3Q5VTT5 1437 aa27.87■■■□□ 2.05
PGAP3-206ENST00000579146 ARHGEF11O15085 1522 aa27.84■■■□□ 2.05
PGAP3-206ENST00000579146 EPRSP07814 1512 aaKnown RBP27.83■■■□□ 2.05
PGAP3-206ENST00000579146 MAGI1Q96QZ7 1491 aaPredicted RBP27.81■■■□□ 2.04
PGAP3-206ENST00000579146 KIAA0556O60303 1618 aa27.8■■■□□ 2.04
PGAP3-206ENST00000579146 DISP1Q96F81 1524 aa27.8■■■□□ 2.04
PGAP3-206ENST00000579146 PTPRKQ15262 1439 aa27.75■■■□□ 2.03
PGAP3-206ENST00000579146 CDK13Q14004 1512 aaKnown RBP27.75■■■□□ 2.03
PGAP3-206ENST00000579146 PTPN23Q9H3S7 1636 aa27.74■■■□□ 2.03
PGAP3-206ENST00000579146 SYNJ2O15056 1496 aa27.73■■■□□ 2.03
PGAP3-206ENST00000579146 HFM1A2PYH4 1435 aa27.71■■■□□ 2.03
PGAP3-206ENST00000579146 CEP170Q5SW79 1584 aa27.69■■■□□ 2.02
PGAP3-206ENST00000579146 CHMP7Q8WUX9 453 aaPredicted RBP27.68■■■□□ 2.02
PGAP3-206ENST00000579146 TCOF1Q13428 1488 aaKnown RBP27.67■■■□□ 2.02
PGAP3-206ENST00000579146 MIER1Q8N108 512 aa27.64■■■□□ 2.02
PGAP3-206ENST00000579146 RAPGEF6Q8TEU7 1601 aa27.63■■■□□ 2.01
PGAP3-206ENST00000579146 NUP153P49790 1475 aaKnown RBP27.62■■■□□ 2.01
PGAP3-206ENST00000579146 NAIPQ13075 1403 aa27.62■■■□□ 2.01
PGAP3-206ENST00000579146 ARID3CA6NKF2 412 aa27.61■■■□□ 2.01
PGAP3-206ENST00000579146 ACIN1Q9UKV3 1341 aaKnown RBP27.6■■■□□ 2.01
PGAP3-206ENST00000579146 SIN3AQ96ST3 1273 aa27.6■■■□□ 2.01
PGAP3-206ENST00000579146 MIA2Q96PC5 1412 aa27.6■■■□□ 2.01
PGAP3-206ENST00000579146 NUP160Q12769 1436 aa27.59■■■□□ 2.01
PGAP3-206ENST00000579146 SCAF1Q9H7N4 1312 aaKnown RBP27.59■■■□□ 2.01
PGAP3-206ENST00000579146 PELP1Q8IZL8 1130 aaKnown RBP27.59■■■□□ 2.01
PGAP3-206ENST00000579146 UACAQ9BZF9 1416 aa27.57■■■□□ 2
PGAP3-206ENST00000579146 NEUROD1Q13562 356 aa27.57■■■□□ 2
PGAP3-206ENST00000579146 CENPBP07199 599 aaPredicted RBP27.56■■■□□ 2
PGAP3-206ENST00000579146 FBLN2P98095 1184 aa27.56■■■□□ 2
PGAP3-206ENST00000579146 TIMELESSQ9UNS1 1208 aa27.56■■■□□ 2
PGAP3-206ENST00000579146 GCC2Q8IWJ2 1684 aa27.5■■□□□ 1.99
PGAP3-206ENST00000579146 CARMIL2Q6F5E8 1435 aa27.49■■□□□ 1.99
PGAP3-206ENST00000579146 AKNAQ7Z591 1439 aa27.49■■□□□ 1.99
PGAP3-206ENST00000579146 JPH4Q96JJ6 628 aa27.48■■□□□ 1.99
PGAP3-206ENST00000579146 CDK11AQ9UQ88 783 aaPredicted RBP27.47■■□□□ 1.99
PGAP3-206ENST00000579146 PLB1Q6P1J6 1458 aa27.46■■□□□ 1.99
PGAP3-206ENST00000579146 CHIC2Q9UKJ5 165 aa27.44■■□□□ 1.98
PGAP3-206ENST00000579146 RRP7BPQ9NSQ0 103 aa27.43■■□□□ 1.98
PGAP3-206ENST00000579146 TROQ12816 1431 aaPredicted RBP27.4■■□□□ 1.98
PGAP3-206ENST00000579146 PRG4Q92954 1404 aaPredicted RBP27.38■■□□□ 1.97
PGAP3-206ENST00000579146 PPP1R15AO75807 674 aaPredicted RBP27.38■■□□□ 1.97
PGAP3-206ENST00000579146 DNMT1P26358 1616 aaKnown RBP27.36■■□□□ 1.97
PGAP3-206ENST00000579146 YTHDC1Q96MU7 727 aaKnown RBP27.36■■□□□ 1.97
PGAP3-206ENST00000579146 KDM6BO15054 1643 aa27.36■■□□□ 1.97
PGAP3-206ENST00000579146 DAPK1P53355 1430 aa27.36■■□□□ 1.97
PGAP3-206ENST00000579146 ADCY10Q96PN6 1610 aa27.34■■□□□ 1.97
PGAP3-206ENST00000579146 TONSLQ96HA7 1378 aa27.33■■□□□ 1.97
PGAP3-206ENST00000579146 ABCA8O94911 1581 aa27.32■■□□□ 1.96
PGAP3-206ENST00000579146 ROCK1Q13464 1354 aa27.32■■□□□ 1.96
PGAP3-206ENST00000579146 ABCC5O15440 1437 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 1772 ms