RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 NCBP3Q53F19 620 aaKnown RBP6.74□□□□□ -1.33
NF1-219ENST00000579081 HNRNPUQ00839 825 aaKnown RBP eCLIP6.74□□□□□ -1.33
NF1-219ENST00000579081 NBR1Q14596 966 aa6.74□□□□□ -1.33
NF1-219ENST00000579081 GOLGA6L22H0YM25 854 aa6.73□□□□□ -1.33
NF1-219ENST00000579081 PTMAP06454 111 aaKnown RBP6.73□□□□□ -1.33
NF1-219ENST00000579081 TMC1Q8TDI8 760 aa6.72□□□□□ -1.33
NF1-219ENST00000579081 TIMELESSQ9UNS1 1208 aa6.71□□□□□ -1.34
NF1-219ENST00000579081 BECN1Q14457 450 aa6.71□□□□□ -1.34
NF1-219ENST00000579081 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.7□□□□□ -1.341e-7■■■■□ 20.8
NF1-219ENST00000579081 TONSLQ96HA7 1378 aa6.7□□□□□ -1.34
NF1-219ENST00000579081 DNTTIP2Q5QJE6 756 aaKnown RBP6.7□□□□□ -1.34
NF1-219ENST00000579081 NPHP1O15259 732 aa6.7□□□□□ -1.34
NF1-219ENST00000579081 PABPN1Q86U42 306 aaKnown RBP eCLIP6.69□□□□□ -1.34
NF1-219ENST00000579081 A0A0U1RQG5 324 aaPredicted RBP6.69□□□□□ -1.34
NF1-219ENST00000579081 CLSTN1O94985 981 aa6.68□□□□□ -1.34
NF1-219ENST00000579081 TPRNQ4KMQ1 711 aa6.68□□□□□ -1.34
NF1-219ENST00000579081 MYO15BQ96JP2 1530 aa6.68□□□□□ -1.34
NF1-219ENST00000579081 PPP1R15AO75807 674 aaPredicted RBP6.68□□□□□ -1.34
NF1-219ENST00000579081 DDRGK1Q96HY6 314 aa6.68□□□□□ -1.34
NF1-219ENST00000579081 CASC1Q6TDU7 716 aa6.68□□□□□ -1.34
NF1-219ENST00000579081 GOLGA6L6A8MZA4 724 aa6.68□□□□□ -1.34
NF1-219ENST00000579081 IL27Q8NEV9 243 aa6.67□□□□□ -1.34
NF1-219ENST00000579081 TAOK2Q9UL54 1235 aa6.67□□□□□ -1.34
NF1-219ENST00000579081 NRDCO43847 1150 aa6.65□□□□□ -1.35
NF1-219ENST00000579081 DDX10Q13206 875 aaKnown RBP6.65□□□□□ -1.35
NF1-219ENST00000579081 KDM2AQ9Y2K7 1162 aa6.65□□□□□ -1.35
NF1-219ENST00000579081 PLCB2Q00722 1185 aa6.64□□□□□ -1.35
NF1-219ENST00000579081 CALRP27797 417 aaKnown RBP6.64□□□□□ -1.35
NF1-219ENST00000579081 MTERF4Q7Z6M4 381 aaKnown RBP6.64□□□□□ -1.35
NF1-219ENST00000579081 MRS2Q9HD23 443 aa6.64□□□□□ -1.35
NF1-219ENST00000579081 CHMP4BQ9H444 224 aaKnown RBP6.64□□□□□ -1.35
NF1-219ENST00000579081 PRM3Q9NNZ6 103 aa6.63□□□□□ -1.35
NF1-219ENST00000579081 GOLGA2Q08379 1002 aa6.63□□□□□ -1.35
NF1-219ENST00000579081 FGD1P98174 961 aa6.63□□□□□ -1.35
NF1-219ENST00000579081 SENP3Q9H4L4 574 aaPredicted RBP6.63□□□□□ -1.35
NF1-219ENST00000579081 TSPY4P0CV99 314 aa6.62□□□□□ -1.35
NF1-219ENST00000579081 TSPY10P0CW01 314 aa6.62□□□□□ -1.35
NF1-219ENST00000579081 L1TD1Q5T7N2 865 aaKnown RBP6.62□□□□□ -1.35
NF1-219ENST00000579081 CFAP53Q96M91 514 aa6.62□□□□□ -1.35
NF1-219ENST00000579081 BAZ1BQ9UIG0 1483 aaKnown RBP6.62□□□□□ -1.35
NF1-219ENST00000579081 PPM1GO15355 546 aaPredicted RBP6.62□□□□□ -1.35
NF1-219ENST00000579081 NAP1L2Q9ULW6 460 aaPredicted RBP6.62□□□□□ -1.35
NF1-219ENST00000579081 ISY1Q9ULR0 285 aaKnown RBP6.61□□□□□ -1.35
NF1-219ENST00000579081 HMGB3O15347 200 aaKnown RBP6.61□□□□□ -1.35
NF1-219ENST00000579081 CHIC2Q9UKJ5 165 aa6.61□□□□□ -1.35
NF1-219ENST00000579081 PNNQ9H307 717 aaKnown RBP6.61□□□□□ -1.35
NF1-219ENST00000579081 OS9Q13438 667 aaPredicted RBP6.6□□□□□ -1.35
NF1-219ENST00000579081 LMOD2Q6P5Q4 547 aa6.6□□□□□ -1.35
NF1-219ENST00000579081 NAP1L5Q96NT1 182 aaPredicted RBP6.6□□□□□ -1.35
NF1-219ENST00000579081 KCNJ4P48050 445 aa6.59□□□□□ -1.35
NF1-219ENST00000579081 IRX6P78412 446 aaPredicted RBP6.58□□□□□ -1.36
NF1-219ENST00000579081 GOLGA6L4A6NEF3 574 aa6.58□□□□□ -1.36
NF1-219ENST00000579081 FTSJ3Q8IY81 847 aaKnown RBP6.58□□□□□ -1.36
NF1-219ENST00000579081 ANO8Q9HCE9 1232 aaPredicted RBP6.58□□□□□ -1.36
NF1-219ENST00000579081 EIF4G2P78344 907 aaKnown RBP eCLIP6.58□□□□□ -1.36
NF1-219ENST00000579081 CSRNP3Q8WYN3 585 aa6.58□□□□□ -1.36
NF1-219ENST00000579081 PRKCSHP14314 528 aaPredicted RBP6.57□□□□□ -1.36
NF1-219ENST00000579081 KIAA2012Q0VF49 1180 aa6.57□□□□□ -1.36
NF1-219ENST00000579081 MAPK8IP3Q9UPT6 1336 aa6.57□□□□□ -1.36
NF1-219ENST00000579081 CHAF1AQ13111 956 aaPredicted RBP6.56□□□□□ -1.36
NF1-219ENST00000579081 MAP7D2Q96T17 732 aa6.56□□□□□ -1.36
NF1-219ENST00000579081 HSP90AB1P08238 724 aaKnown RBP6.56□□□□□ -1.36
NF1-219ENST00000579081 NUDCQ9Y266 331 aa6.55□□□□□ -1.36
NF1-219ENST00000579081 NOC3LQ8WTT2 800 aaKnown RBP6.55□□□□□ -1.36
NF1-219ENST00000579081 DHX8Q14562 1220 aaKnown RBP6.55□□□□□ -1.36
NF1-219ENST00000579081 GOLGA3Q08378 1498 aa6.55□□□□□ -1.36
NF1-219ENST00000579081 TAF3Q5VWG9 929 aa6.54□□□□□ -1.36
NF1-219ENST00000579081 ARID3AQ99856 593 aa6.54□□□□□ -1.36
NF1-219ENST00000579081 AAMPQ13685 434 aa6.54□□□□□ -1.36
NF1-219ENST00000579081 CDCA8Q53HL2 280 aa6.54□□□□□ -1.36
NF1-219ENST00000579081 AMER1Q5JTC6 1135 aaPredicted RBP6.54□□□□□ -1.36
NF1-219ENST00000579081 DRC7Q8IY82 874 aa6.54□□□□□ -1.36
NF1-219ENST00000579081 GNL2Q13823 731 aaKnown RBP6.53□□□□□ -1.36
NF1-219ENST00000579081 NGEFQ8N5V2 710 aa6.53□□□□□ -1.36
NF1-219ENST00000579081 HMGB1P1B2RPK0 211 aaPredicted RBP6.53□□□□□ -1.36
NF1-219ENST00000579081 NEUROD2Q15784 382 aa6.53□□□□□ -1.36
NF1-219ENST00000579081 KRI1Q8N9T8 703 aaKnown RBP6.53□□□□□ -1.36
NF1-219ENST00000579081 BAZ1AQ9NRL2 1556 aaPredicted RBP6.52□□□□□ -1.37
NF1-219ENST00000579081 KNSTRNQ9Y448 316 aa6.52□□□□□ -1.37
NF1-219ENST00000579081 MS4A1P11836 297 aa6.52□□□□□ -1.37
NF1-219ENST00000579081 TMX4Q9H1E5 349 aaPredicted RBP6.52□□□□□ -1.37
NF1-219ENST00000579081 POGKQ9P215 609 aa6.52□□□□□ -1.37
NF1-219ENST00000579081 CEP162Q5TB80 1403 aa6.51□□□□□ -1.37
NF1-219ENST00000579081 MCCP23508 829 aa6.51□□□□□ -1.37
NF1-219ENST00000579081 RSPH6AQ9H0K4 717 aa6.51□□□□□ -1.37
NF1-219ENST00000579081 KCNH8Q96L42 1107 aa6.51□□□□□ -1.37
NF1-219ENST00000579081 PDE4CQ08493 712 aa6.51□□□□□ -1.37
NF1-219ENST00000579081 RGL3Q3MIN7 710 aa6.5□□□□□ -1.37
NF1-219ENST00000579081 FRAT1Q92837 279 aaPredicted RBP6.5□□□□□ -1.37
NF1-219ENST00000579081 PHLDB1Q86UU1 1377 aa6.5□□□□□ -1.37
NF1-219ENST00000579081 MSNP26038 577 aaKnown RBP6.5□□□□□ -1.37
NF1-219ENST00000579081 ZCCHC6Q5VYS8 1495 aaKnown RBP6.5□□□□□ -1.37
NF1-219ENST00000579081 RGS3P49796 1198 aa6.49□□□□□ -1.37
NF1-219ENST00000579081 CHMP4AQ9BY43 222 aa6.49□□□□□ -1.37
NF1-219ENST00000579081 HSCBQ8IWL3 235 aa6.49□□□□□ -1.37
NF1-219ENST00000579081 CHMP7Q8WUX9 453 aaPredicted RBP6.49□□□□□ -1.37
NF1-219ENST00000579081 CHMP4CQ96CF2 233 aa6.49□□□□□ -1.37
NF1-219ENST00000579081 GOLGA6L3A6NEY3 463 aa6.48□□□□□ -1.37
NF1-219ENST00000579081 CEP89Q96ST8 783 aa6.48□□□□□ -1.37
NF1-219ENST00000579081 U2SURPO15042 1029 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms