RNA–Protein interactions for RNA: ENST00000578618.5

EPB41L3-214, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

TSL 1 (best)

Gene EPB41L3, Length 4,908 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-214ENST00000578618 PPP4R2Q9NY27 417 aa12.52□□□□□ -0.4
EPB41L3-214ENST00000578618 ARID3AQ99856 593 aa12.52□□□□□ -0.41
EPB41L3-214ENST00000578618 B4GALNT3Q6L9W6 998 aa12.49□□□□□ -0.41
EPB41L3-214ENST00000578618 IL27Q8NEV9 243 aa12.47□□□□□ -0.41
EPB41L3-214ENST00000578618 CANXP27824 592 aaKnown RBP12.45□□□□□ -0.42
EPB41L3-214ENST00000578618 DNTTIP2Q5QJE6 756 aaKnown RBP12.45□□□□□ -0.42
EPB41L3-214ENST00000578618 L1TD1Q5T7N2 865 aaKnown RBP12.44□□□□□ -0.42
EPB41L3-214ENST00000578618 BECN1Q14457 450 aa12.42□□□□□ -0.42
EPB41L3-214ENST00000578618 FANCIQ9NVI1 1328 aa12.41□□□□□ -0.42
EPB41L3-214ENST00000578618 FAM50AQ14320 339 aaKnown RBP12.41□□□□□ -0.42
EPB41L3-214ENST00000578618 IPO9Q96P70 1041 aaKnown RBP12.4□□□□□ -0.42
EPB41L3-214ENST00000578618 MRS2Q9HD23 443 aa12.37□□□□□ -0.43
EPB41L3-214ENST00000578618 HIRIP3Q9BW71 556 aaPredicted RBP12.36□□□□□ -0.43
EPB41L3-214ENST00000578618 PTMAP06454 111 aaKnown RBP12.36□□□□□ -0.43
EPB41L3-214ENST00000578618 ZNF326Q5BKZ1 582 aaKnown RBP12.35□□□□□ -0.43
EPB41L3-214ENST00000578618 MSNP26038 577 aaKnown RBP12.34□□□□□ -0.43
EPB41L3-214ENST00000578618 GSE1Q14687 1217 aa12.33□□□□□ -0.44
EPB41L3-214ENST00000578618 USP35Q9P2H5 1018 aa12.33□□□□□ -0.44
EPB41L3-214ENST00000578618 PDE4CQ08493 712 aa12.32□□□□□ -0.44
EPB41L3-214ENST00000578618 TNNT3P45378 269 aaPredicted RBP12.31□□□□□ -0.44
EPB41L3-214ENST00000578618 PLEKHG5O94827 1062 aa12.3□□□□□ -0.44
EPB41L3-214ENST00000578618 GOLGA6L22H0YM25 854 aa12.28□□□□□ -0.44
EPB41L3-214ENST00000578618 BRPF3Q9ULD4 1205 aa12.27□□□□□ -0.45
EPB41L3-214ENST00000578618 ZMYND15Q9H091 742 aa12.27□□□□□ -0.45
EPB41L3-214ENST00000578618 GZF1Q9H116 711 aaPredicted RBP12.26□□□□□ -0.45
EPB41L3-214ENST00000578618 SENP3-EIF4A1A0A087X0R7 540 aa12.25□□□□□ -0.45
EPB41L3-214ENST00000578618 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.25□□□□□ -0.45
EPB41L3-214ENST00000578618 SLC4A1APQ9BWU0 796 aaKnown RBP12.23□□□□□ -0.45
EPB41L3-214ENST00000578618 ZBTB7CA1YPR0 619 aa12.23□□□□□ -0.45
EPB41L3-214ENST00000578618 TMC1Q8TDI8 760 aa12.23□□□□□ -0.45
EPB41L3-214ENST00000578618 GOLGA6L3A6NEY3 463 aa12.22□□□□□ -0.45
EPB41L3-214ENST00000578618 TONSLQ96HA7 1378 aa12.21□□□□□ -0.45
EPB41L3-214ENST00000578618 RGS3P49796 1198 aa12.19□□□□□ -0.46
EPB41L3-214ENST00000578618 FAM13BQ9NYF5 915 aa12.18□□□□□ -0.46
EPB41L3-214ENST00000578618 CHAF1AQ13111 956 aaPredicted RBP12.16□□□□□ -0.46
EPB41L3-214ENST00000578618 MYH16Q9H6N6 1097 aa12.16□□□□□ -0.46
EPB41L3-214ENST00000578618 APPP05067 770 aa12.16□□□□□ -0.46
EPB41L3-214ENST00000578618 SLKQ9H2G2 1235 aaPredicted RBP12.15□□□□□ -0.46
EPB41L3-214ENST00000578618 SPRYD3Q8NCJ5 442 aa12.14□□□□□ -0.47
EPB41L3-214ENST00000578618 MSH5O43196 834 aa12.14□□□□□ -0.47
EPB41L3-214ENST00000578618 RRP9O43818 475 aaKnown RBP12.13□□□□□ -0.47
EPB41L3-214ENST00000578618 PLCB2Q00722 1185 aa12.13□□□□□ -0.47
EPB41L3-214ENST00000578618 FAM43AQ8N2R8 423 aa12.12□□□□□ -0.47
EPB41L3-214ENST00000578618 TCERG1O14776 1098 aaKnown RBP12.11□□□□□ -0.47
EPB41L3-214ENST00000578618 PTMSP20962 102 aa12.11□□□□□ -0.47
EPB41L3-214ENST00000578618 CCER2I3L3R5 266 aa12.11□□□□□ -0.47
EPB41L3-214ENST00000578618 PAK3O75914 559 aaPredicted RBP12.1□□□□□ -0.47
EPB41L3-214ENST00000578618 KCNH8Q96L42 1107 aa12.1□□□□□ -0.47
EPB41L3-214ENST00000578618 SLC4A3P48751 1232 aa12.1□□□□□ -0.47
EPB41L3-214ENST00000578618 ZNF771Q7L3S4 317 aaPredicted RBP12.1□□□□□ -0.47
EPB41L3-214ENST00000578618 FRAT1Q92837 279 aaPredicted RBP12.09□□□□□ -0.47
EPB41L3-214ENST00000578618 TPRNQ4KMQ1 711 aa12.07□□□□□ -0.48
EPB41L3-214ENST00000578618 PDIA4P13667 645 aaKnown RBP12.04□□□□□ -0.48
EPB41L3-214ENST00000578618 KIAA2012Q0VF49 1180 aa12.03□□□□□ -0.48
EPB41L3-214ENST00000578618 HSP90AB1P08238 724 aaKnown RBP12.03□□□□□ -0.48
EPB41L3-214ENST00000578618 NFKBIBQ15653 356 aa12.03□□□□□ -0.48
EPB41L3-214ENST00000578618 MAPK8IP2Q13387 824 aaPredicted RBP12.02□□□□□ -0.48
EPB41L3-214ENST00000578618 RBM10P98175 930 aaKnown RBP12.02□□□□□ -0.49
EPB41L3-214ENST00000578618 MAP7D2Q96T17 732 aa12.02□□□□□ -0.49
EPB41L3-214ENST00000578618 PDE4AP27815 886 aa12□□□□□ -0.49
EPB41L3-214ENST00000578618 BBXQ8WY36 941 aaPredicted RBP12□□□□□ -0.49
EPB41L3-214ENST00000578618 TPM2P07951 284 aa12□□□□□ -0.49
EPB41L3-214ENST00000578618 HSCBQ8IWL3 235 aa12□□□□□ -0.49
EPB41L3-214ENST00000578618 WDR43Q15061 677 aaKnown RBP eCLIP11.99□□□□□ -0.49
EPB41L3-214ENST00000578618 EIF4G2P78344 907 aaKnown RBP eCLIP11.98□□□□□ -0.49
EPB41L3-214ENST00000578618 GBP4Q96PP9 640 aa11.97□□□□□ -0.49
EPB41L3-214ENST00000578618 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.97□□□□□ -0.49
EPB41L3-214ENST00000578618 MTERF4Q7Z6M4 381 aaKnown RBP11.95□□□□□ -0.5
EPB41L3-214ENST00000578618 R3HCC1Q9Y3T6 440 aaKnown RBP11.94□□□□□ -0.5
EPB41L3-214ENST00000578618 SIN3AQ96ST3 1273 aa11.93□□□□□ -0.5
EPB41L3-214ENST00000578618 ZHX1Q9UKY1 873 aaPredicted RBP11.91□□□□□ -0.5
EPB41L3-214ENST00000578618 DRC7Q8IY82 874 aa11.89□□□□□ -0.51
EPB41L3-214ENST00000578618 PRDM10Q9NQV6 1147 aa11.89□□□□□ -0.51
EPB41L3-214ENST00000578618 AEBP1Q8IUX7 1158 aa11.89□□□□□ -0.51
EPB41L3-214ENST00000578618 BCL11BQ9C0K0 894 aaPredicted RBP11.88□□□□□ -0.51
EPB41L3-214ENST00000578618 FRAT2O75474 233 aaPredicted RBP11.88□□□□□ -0.51
EPB41L3-214ENST00000578618 GOLGA6L6A8MZA4 724 aa11.88□□□□□ -0.51
EPB41L3-214ENST00000578618 PAXIP1Q6ZW49 1069 aaPredicted RBP11.87□□□□□ -0.51
EPB41L3-214ENST00000578618 PDCL3Q9H2J4 239 aa11.87□□□□□ -0.51
EPB41L3-214ENST00000578618 TAF7LQ5H9L4 462 aa11.86□□□□□ -0.51
EPB41L3-214ENST00000578618 DDX11L8A8MPP1 907 aa11.86□□□□□ -0.51
EPB41L3-214ENST00000578618 KIAA1211Q6ZU35 1233 aa11.86□□□□□ -0.51
EPB41L3-214ENST00000578618 CCDC66A2RUB6 948 aa11.86□□□□□ -0.51
EPB41L3-214ENST00000578618 CSPP1Q1MSJ5 1256 aa11.86□□□□□ -0.51
EPB41L3-214ENST00000578618 ZCCHC6Q5VYS8 1495 aaKnown RBP11.85□□□□□ -0.51
EPB41L3-214ENST00000578618 CALD1Q05682 793 aaKnown RBP11.85□□□□□ -0.51
EPB41L3-214ENST00000578618 CALRP27797 417 aaKnown RBP11.84□□□□□ -0.51
EPB41L3-214ENST00000578618 MRE11P49959 708 aa11.84□□□□□ -0.51
EPB41L3-214ENST00000578618 RCAN3Q9UKA8 241 aa11.84□□□□□ -0.51
EPB41L3-214ENST00000578618 NUDCQ9Y266 331 aa11.84□□□□□ -0.51
EPB41L3-214ENST00000578618 GOLGA6L1Q8N7Z2 621 aa11.84□□□□□ -0.51
EPB41L3-214ENST00000578618 PLCD3Q8N3E9 789 aa11.83□□□□□ -0.52
EPB41L3-214ENST00000578618 CEP162Q5TB80 1403 aa11.83□□□□□ -0.52
EPB41L3-214ENST00000578618 PATL2C9JE40 543 aaKnown RBP11.83□□□□□ -0.52
EPB41L3-214ENST00000578618 EEA1Q15075 1411 aa11.83□□□□□ -0.52
EPB41L3-214ENST00000578618 NRDCO43847 1150 aa11.83□□□□□ -0.52
EPB41L3-214ENST00000578618 HAP1P54257 671 aaPredicted RBP11.82□□□□□ -0.52
EPB41L3-214ENST00000578618 ZRSR1Q15695 479 aaKnown RBP11.82□□□□□ -0.52
EPB41L3-214ENST00000578618 FAM161AQ3B820 660 aa11.8□□□□□ -0.52
EPB41L3-214ENST00000578618 MS4A1P11836 297 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms