RNA–Protein interactions for RNA: ENST00000578217.1

SLC46A1-201, Transcript of solute carrier family 46 member 1, humanhuman

TSL 4

Gene SLC46A1, Length 596 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-201ENST00000578217 CUX1P39880 1505 aa15.31■□□□□ 0.04
SLC46A1-201ENST00000578217 KIF13AQ9H1H9 1805 aa15.31■□□□□ 0.04
SLC46A1-201ENST00000578217 WDR97A6NE52 1622 aa15.3■□□□□ 0.04
SLC46A1-201ENST00000578217 NPM3O75607 178 aaKnown RBP15.29■□□□□ 0.04
SLC46A1-201ENST00000578217 PBRM1Q86U86 1689 aa15.26■□□□□ 0.03
SLC46A1-201ENST00000578217 KDM4FA0A1W2PPD8 638 aa15.26■□□□□ 0.03
SLC46A1-201ENST00000578217 CEP170Q5SW79 1584 aa15.24■□□□□ 0.03
SLC46A1-201ENST00000578217 RNF216Q9NWF9 866 aaPredicted RBP15.21■□□□□ 0.03
SLC46A1-201ENST00000578217 HOXD11P31277 338 aaPredicted RBP15.2■□□□□ 0.02
SLC46A1-201ENST00000578217 ABCA5Q8WWZ7 1642 aa15.18■□□□□ 0.02
SLC46A1-201ENST00000578217 GRIN2AQ12879 1464 aa15.17■□□□□ 0.02
SLC46A1-201ENST00000578217 NUP160Q12769 1436 aa15.16■□□□□ 0.02
SLC46A1-201ENST00000578217 SHROOM2Q13796 1616 aa15.15■□□□□ 0.02
SLC46A1-201ENST00000578217 ABCA10Q8WWZ4 1543 aa15.13■□□□□ 0.01
SLC46A1-201ENST00000578217 FAM69CQ0P6D2 419 aa15.12■□□□□ 0.01
SLC46A1-201ENST00000578217 ADAMTS12P58397 1594 aa15.11■□□□□ 0.01
SLC46A1-201ENST00000578217 ABCC10Q5T3U5 1492 aa15.1■□□□□ 0.01
SLC46A1-201ENST00000578217 DIP2BQ9P265 1576 aa15.07■□□□□ 0
SLC46A1-201ENST00000578217 PRG4Q92954 1404 aaPredicted RBP15.06■□□□□ 0
SLC46A1-201ENST00000578217 KDM6BO15054 1643 aa15.04■□□□□ -0
SLC46A1-201ENST00000578217 TSPOAP1O95153 1857 aa15.02■□□□□ -0
SLC46A1-201ENST00000578217 MAPKBP1O60336 1514 aa15.01□□□□□ -0.01
SLC46A1-201ENST00000578217 ADCY10Q96PN6 1610 aa15□□□□□ -0.01
SLC46A1-201ENST00000578217 DCAF8L1A6NGE4 600 aa15□□□□□ -0.01
SLC46A1-201ENST00000578217 FHAD1B1AJZ9 1412 aa15□□□□□ -0.01
SLC46A1-201ENST00000578217 JPH4Q96JJ6 628 aa14.98□□□□□ -0.01
SLC46A1-201ENST00000578217 ADGRL1O94910 1474 aa14.95□□□□□ -0.02
SLC46A1-201ENST00000578217 RNF39Q9H2S5 420 aa14.94□□□□□ -0.02
SLC46A1-201ENST00000578217 HECW2Q9P2P5 1572 aa14.94□□□□□ -0.02
SLC46A1-201ENST00000578217 WRNQ14191 1432 aaPredicted RBP eCLIP14.92□□□□□ -0.02
SLC46A1-201ENST00000578217 RUSC2Q8N2Y8 1516 aa14.91□□□□□ -0.02
SLC46A1-201ENST00000578217 NPM1P06748 294 aaKnown RBP eCLIP14.9□□□□□ -0.02
SLC46A1-201ENST00000578217 ERICH3Q5RHP9 1530 aa14.89□□□□□ -0.03
SLC46A1-201ENST00000578217 PPRC1Q5VV67 1664 aaKnown RBP14.88□□□□□ -0.03
SLC46A1-201ENST00000578217 COL17A1Q9UMD9 1497 aaPredicted RBP14.87□□□□□ -0.03
SLC46A1-201ENST00000578217 BIVM-ERCC5R4GMW8 1640 aa14.84□□□□□ -0.03
SLC46A1-201ENST00000578217 TOP2BQ02880 1626 aa14.83□□□□□ -0.04
SLC46A1-201ENST00000578217 ASXL2Q76L83 1435 aa14.75□□□□□ -0.05
SLC46A1-201ENST00000578217 TTBK1Q5TCY1 1321 aaPredicted RBP14.75□□□□□ -0.05
SLC46A1-201ENST00000578217 FBXO41Q8TF61 875 aa14.74□□□□□ -0.05
SLC46A1-201ENST00000578217 GLI2P10070 1586 aa14.73□□□□□ -0.05
SLC46A1-201ENST00000578217 KIAA0586Q9BVV6 1533 aa14.73□□□□□ -0.05
SLC46A1-201ENST00000578217 SLC4A1APQ9BWU0 796 aaKnown RBP14.72□□□□□ -0.05
SLC46A1-201ENST00000578217 ABCC2Q92887 1545 aa14.71□□□□□ -0.05
SLC46A1-201ENST00000578217 PTPRGP23470 1445 aa14.71□□□□□ -0.05
SLC46A1-201ENST00000578217 CUL7Q14999 1698 aa14.68□□□□□ -0.06
SLC46A1-201ENST00000578217 PLB1Q6P1J6 1458 aa14.68□□□□□ -0.06
SLC46A1-201ENST00000578217 MAP3K4Q9Y6R4 1608 aa14.66□□□□□ -0.06
SLC46A1-201ENST00000578217 EPRSP07814 1512 aaKnown RBP14.66□□□□□ -0.06
SLC46A1-201ENST00000578217 IGF1RP08069 1367 aa14.65□□□□□ -0.06
SLC46A1-201ENST00000578217 C1QBPQ07021 282 aaKnown RBP14.65□□□□□ -0.06
SLC46A1-201ENST00000578217 TNIKQ9UKE5 1360 aa14.62□□□□□ -0.07
SLC46A1-201ENST00000578217 UHRF1BP1LA0JNW5 1464 aa14.61□□□□□ -0.07
SLC46A1-201ENST00000578217 UACAQ9BZF9 1416 aa14.58□□□□□ -0.07
SLC46A1-201ENST00000578217 SUPT5HO00267 1087 aaKnown RBP14.58□□□□□ -0.08
SLC46A1-201ENST00000578217 KDM5BQ9UGL1 1544 aa14.57□□□□□ -0.08
SLC46A1-201ENST00000578217 TEX14Q8IWB6 1497 aa14.57□□□□□ -0.08
SLC46A1-201ENST00000578217 KIF21BO75037 1637 aa14.56□□□□□ -0.08
SLC46A1-201ENST00000578217 DISP1Q96F81 1524 aa14.56□□□□□ -0.08
SLC46A1-201ENST00000578217 ZCCHC11Q5TAX3 1644 aaKnown RBP14.55□□□□□ -0.08
SLC46A1-201ENST00000578217 LMTK3Q96Q04 1460 aa14.54□□□□□ -0.08
SLC46A1-201ENST00000578217 CARMIL2Q6F5E8 1435 aa14.53□□□□□ -0.08
SLC46A1-201ENST00000578217 ILDR2Q71H61 639 aa14.52□□□□□ -0.09
SLC46A1-201ENST00000578217 IQGAP2Q13576 1575 aa14.51□□□□□ -0.09
SLC46A1-201ENST00000578217 CARMIL1Q5VZK9 1371 aa14.49□□□□□ -0.09
SLC46A1-201ENST00000578217 SLC4A2P04920 1241 aa14.49□□□□□ -0.09
SLC46A1-201ENST00000578217 KIF27Q86VH2 1401 aa14.49□□□□□ -0.09
SLC46A1-201ENST00000578217 PTPRMP28827 1452 aa14.48□□□□□ -0.09
SLC46A1-201ENST00000578217 WDR7Q9Y4E6 1490 aa14.48□□□□□ -0.09
SLC46A1-201ENST00000578217 ADAMTSL3P82987 1691 aa14.46□□□□□ -0.09
SLC46A1-201ENST00000578217 CD109Q6YHK3 1445 aa14.46□□□□□ -0.09
SLC46A1-201ENST00000578217 MAGI3Q5TCQ9 1506 aa14.46□□□□□ -0.1
SLC46A1-201ENST00000578217 KCNH8Q96L42 1107 aa14.43□□□□□ -0.1
SLC46A1-201ENST00000578217 PCF11O94913 1555 aaKnown RBP14.42□□□□□ -0.1
SLC46A1-201ENST00000578217 CFAP43Q8NDM7 1665 aa14.41□□□□□ -0.1
SLC46A1-201ENST00000578217 KIAA0556O60303 1618 aa14.41□□□□□ -0.1
SLC46A1-201ENST00000578217 UGGT2Q9NYU1 1516 aa14.41□□□□□ -0.1
SLC46A1-201ENST00000578217 SOCS7O14512 581 aa14.39□□□□□ -0.11
SLC46A1-201ENST00000578217 HSPA2P54652 639 aa14.39□□□□□ -0.11
SLC46A1-201ENST00000578217 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.38□□□□□ -0.11
SLC46A1-201ENST00000578217 MADDQ8WXG6 1647 aa14.37□□□□□ -0.11
SLC46A1-201ENST00000578217 ARAP3Q8WWN8 1544 aa14.37□□□□□ -0.11
SLC46A1-201ENST00000578217 DISP3Q9P2K9 1392 aa14.35□□□□□ -0.11
SLC46A1-201ENST00000578217 RAPGEF3O95398 923 aa14.35□□□□□ -0.11
SLC46A1-201ENST00000578217 BCORL1Q5H9F3 1711 aa14.35□□□□□ -0.11
SLC46A1-201ENST00000578217 CERKQ8TCT0 537 aa14.34□□□□□ -0.11
SLC46A1-201ENST00000578217 ABCA8O94911 1581 aa14.34□□□□□ -0.11
SLC46A1-201ENST00000578217 FRMPD1Q5SYB0 1578 aa14.31□□□□□ -0.12
SLC46A1-201ENST00000578217 ZBTB22O15209 634 aa14.31□□□□□ -0.12
SLC46A1-201ENST00000578217 ARID3CA6NKF2 412 aa14.3□□□□□ -0.12
SLC46A1-201ENST00000578217 RIMS1Q86UR5 1692 aaKnown RBP14.3□□□□□ -0.12
SLC46A1-201ENST00000578217 RAPGEF2Q9Y4G8 1499 aa14.27□□□□□ -0.12
SLC46A1-201ENST00000578217 ARID4BQ4LE39 1312 aaPredicted RBP14.26□□□□□ -0.13
SLC46A1-201ENST00000578217 FOXD4L1Q9NU39 408 aa14.26□□□□□ -0.13
SLC46A1-201ENST00000578217 SIGLEC1Q9BZZ2 1709 aa14.25□□□□□ -0.13
SLC46A1-201ENST00000578217 ABCA9Q8IUA7 1624 aa14.23□□□□□ -0.13
SLC46A1-201ENST00000578217 U3KPZ7 1027 aaPredicted RBP14.23□□□□□ -0.13
SLC46A1-201ENST00000578217 ATP10BO94823 1461 aa14.23□□□□□ -0.13
SLC46A1-201ENST00000578217 EHMT2Q96KQ7 1210 aa14.2□□□□□ -0.14
SLC46A1-201ENST00000578217 SPATA31D1Q6ZQQ2 1576 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms