RNA–Protein interactions for RNA: ENST00000577524.5

ARHGAP28-208, Transcript of Rho GTPase activating protein 28, humanhuman

TSL 5

Gene ARHGAP28, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-208ENST00000577524 FHAD1B1AJZ9 1412 aa9.27□□□□□ -0.93
ARHGAP28-208ENST00000577524 TRHP20396 242 aaPredicted RBP9.25□□□□□ -0.93
ARHGAP28-208ENST00000577524 GRIN2AQ12879 1464 aa9.25□□□□□ -0.93
ARHGAP28-208ENST00000577524 ERICH3Q5RHP9 1530 aa9.25□□□□□ -0.93
ARHGAP28-208ENST00000577524 KIF27Q86VH2 1401 aa9.24□□□□□ -0.93
ARHGAP28-208ENST00000577524 CLASP1Q7Z460 1538 aa9.24□□□□□ -0.93
ARHGAP28-208ENST00000577524 ARAP1Q96P48 1450 aa9.23□□□□□ -0.93
ARHGAP28-208ENST00000577524 ADAMTS12P58397 1594 aa9.23□□□□□ -0.93
ARHGAP28-208ENST00000577524 DCAF8L1A6NGE4 600 aa9.22□□□□□ -0.93
ARHGAP28-208ENST00000577524 HOXD11P31277 338 aaPredicted RBP9.21□□□□□ -0.94
ARHGAP28-208ENST00000577524 CNKSR2Q8WXI2 1034 aa9.2□□□□□ -0.94
ARHGAP28-208ENST00000577524 NUP160Q12769 1436 aa9.2□□□□□ -0.94
ARHGAP28-208ENST00000577524 JPH4Q96JJ6 628 aa9.18□□□□□ -0.94
ARHGAP28-208ENST00000577524 IGF1RP08069 1367 aa9.17□□□□□ -0.94
ARHGAP28-208ENST00000577524 CEP170Q5SW79 1584 aa9.16□□□□□ -0.94
ARHGAP28-208ENST00000577524 CARMIL1Q5VZK9 1371 aa9.16□□□□□ -0.94
ARHGAP28-208ENST00000577524 PRG4Q92954 1404 aaPredicted RBP9.15□□□□□ -0.94
ARHGAP28-208ENST00000577524 NPM1P06748 294 aaKnown RBP eCLIP9.15□□□□□ -0.94
ARHGAP28-208ENST00000577524 CACNB1Q02641 598 aaPredicted RBP9.14□□□□□ -0.95
ARHGAP28-208ENST00000577524 CUL7Q14999 1698 aa9.13□□□□□ -0.95
ARHGAP28-208ENST00000577524 RNF216Q9NWF9 866 aaPredicted RBP9.12□□□□□ -0.95
ARHGAP28-208ENST00000577524 KIAA0586Q9BVV6 1533 aa9.11□□□□□ -0.95
ARHGAP28-208ENST00000577524 TTBK1Q5TCY1 1321 aaPredicted RBP9.1□□□□□ -0.95
ARHGAP28-208ENST00000577524 ERCC6L2Q5T890 1561 aa9.09□□□□□ -0.95
ARHGAP28-208ENST00000577524 CARMIL2Q6F5E8 1435 aa9.09□□□□□ -0.95
ARHGAP28-208ENST00000577524 FAM9AQ8IZU1 332 aaPredicted RBP9.08□□□□□ -0.96
ARHGAP28-208ENST00000577524 SHROOM2Q13796 1616 aa9.08□□□□□ -0.96
ARHGAP28-208ENST00000577524 RAPGEF2Q9Y4G8 1499 aa9.08□□□□□ -0.96
ARHGAP28-208ENST00000577524 RUSC2Q8N2Y8 1516 aa9.07□□□□□ -0.96
ARHGAP28-208ENST00000577524 PTPRGP23470 1445 aa9.05□□□□□ -0.96
ARHGAP28-208ENST00000577524 TNIKQ9UKE5 1360 aa9.04□□□□□ -0.96
ARHGAP28-208ENST00000577524 RNF39Q9H2S5 420 aa9.03□□□□□ -0.96
ARHGAP28-208ENST00000577524 CSRNP3Q8WYN3 585 aa9.02□□□□□ -0.97
ARHGAP28-208ENST00000577524 IQGAP2Q13576 1575 aa9.02□□□□□ -0.97
ARHGAP28-208ENST00000577524 FAM69CQ0P6D2 419 aa9.01□□□□□ -0.97
ARHGAP28-208ENST00000577524 EEA1Q15075 1411 aa8.98□□□□□ -0.97
ARHGAP28-208ENST00000577524 GOLGA3Q08378 1498 aa8.97□□□□□ -0.97
ARHGAP28-208ENST00000577524 NCBP3Q53F19 620 aaKnown RBP8.97□□□□□ -0.97
ARHGAP28-208ENST00000577524 UACAQ9BZF9 1416 aa8.97□□□□□ -0.97
ARHGAP28-208ENST00000577524 PRXQ9BXM0 1461 aa8.96□□□□□ -0.98
ARHGAP28-208ENST00000577524 UGGT2Q9NYU1 1516 aa8.95□□□□□ -0.98
ARHGAP28-208ENST00000577524 RANGAP1P46060 587 aaPredicted RBP8.95□□□□□ -0.98
ARHGAP28-208ENST00000577524 ABCC10Q5T3U5 1492 aa8.94□□□□□ -0.98
ARHGAP28-208ENST00000577524 MAPKBP1O60336 1514 aa8.94□□□□□ -0.98
ARHGAP28-208ENST00000577524 ABCC2Q92887 1545 aa8.94□□□□□ -0.98
ARHGAP28-208ENST00000577524 DISP1Q96F81 1524 aa8.94□□□□□ -0.98
ARHGAP28-208ENST00000577524 ADCY10Q96PN6 1610 aa8.94□□□□□ -0.98
ARHGAP28-208ENST00000577524 P3H3Q8IVL6 736 aa8.93□□□□□ -0.98
ARHGAP28-208ENST00000577524 UHRF1BP1LA0JNW5 1464 aa8.92□□□□□ -0.98
ARHGAP28-208ENST00000577524 PLB1Q6P1J6 1458 aa8.92□□□□□ -0.98
ARHGAP28-208ENST00000577524 KIAA0556O60303 1618 aa8.91□□□□□ -0.98
ARHGAP28-208ENST00000577524 UBTFP17480 764 aaKnown RBP8.91□□□□□ -0.98
ARHGAP28-208ENST00000577524 EHMT2Q96KQ7 1210 aa8.91□□□□□ -0.98
ARHGAP28-208ENST00000577524 ASXL2Q76L83 1435 aa8.9□□□□□ -0.98
ARHGAP28-208ENST00000577524 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.9□□□□□ -0.98
ARHGAP28-208ENST00000577524 HNRNPUL2Q1KMD3 747 aaKnown RBP8.9□□□□□ -0.98
ARHGAP28-208ENST00000577524 CTTNBP2Q8WZ74 1663 aa8.9□□□□□ -0.98
ARHGAP28-208ENST00000577524 C1QBPQ07021 282 aaKnown RBP8.89□□□□□ -0.99
ARHGAP28-208ENST00000577524 DIP2BQ9P265 1576 aa8.88□□□□□ -0.99
ARHGAP28-208ENST00000577524 KCNH8Q96L42 1107 aa8.88□□□□□ -0.99
ARHGAP28-208ENST00000577524 KDM5BQ9UGL1 1544 aa8.87□□□□□ -0.99
ARHGAP28-208ENST00000577524 ARID3CA6NKF2 412 aa8.87□□□□□ -0.99
ARHGAP28-208ENST00000577524 NPM3O75607 178 aaKnown RBP8.86□□□□□ -0.99
ARHGAP28-208ENST00000577524 KIF13AQ9H1H9 1805 aa8.84□□□□□ -0.99
ARHGAP28-208ENST00000577524 TEX14Q8IWB6 1497 aa8.83□□□□□ -1
ARHGAP28-208ENST00000577524 WDR7Q9Y4E6 1490 aa8.83□□□□□ -1
ARHGAP28-208ENST00000577524 ATP1B4Q9UN42 357 aaPredicted RBP8.83□□□□□ -1
ARHGAP28-208ENST00000577524 EPRSP07814 1512 aaKnown RBP8.83□□□□□ -1
ARHGAP28-208ENST00000577524 ZCCHC11Q5TAX3 1644 aaKnown RBP8.83□□□□□ -1
ARHGAP28-208ENST00000577524 GLI2P10070 1586 aa8.82□□□□□ -1
ARHGAP28-208ENST00000577524 KDM6BO15054 1643 aa8.82□□□□□ -1
ARHGAP28-208ENST00000577524 KIF21BO75037 1637 aa8.82□□□□□ -1
ARHGAP28-208ENST00000577524 ABCA8O94911 1581 aa8.82□□□□□ -1
ARHGAP28-208ENST00000577524 PLEKHD1A6NEE1 506 aa8.81□□□□□ -1
ARHGAP28-208ENST00000577524 TSPOAP1O95153 1857 aa8.81□□□□□ -1
ARHGAP28-208ENST00000577524 FHOD3Q2V2M9 1422 aa8.8□□□□□ -1
ARHGAP28-208ENST00000577524 CD109Q6YHK3 1445 aa8.8□□□□□ -1
ARHGAP28-208ENST00000577524 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.79□□□□□ -1
ARHGAP28-208ENST00000577524 EFCAB5A4FU69 1503 aa8.79□□□□□ -1
ARHGAP28-208ENST00000577524 SAMD9Q5K651 1589 aa8.78□□□□□ -1
ARHGAP28-208ENST00000577524 ATP10BO94823 1461 aa8.78□□□□□ -1
ARHGAP28-208ENST00000577524 CDK11AQ9UQ88 783 aaPredicted RBP8.78□□□□□ -1
ARHGAP28-208ENST00000577524 RAPGEF6Q8TEU7 1601 aa8.76□□□□□ -1.01
ARHGAP28-208ENST00000577524 FMN1Q68DA7 1419 aa8.76□□□□□ -1.01
ARHGAP28-208ENST00000577524 MAGI3Q5TCQ9 1506 aa8.75□□□□□ -1.01
ARHGAP28-208ENST00000577524 MAP3K4Q9Y6R4 1608 aa8.74□□□□□ -1.01
ARHGAP28-208ENST00000577524 PHLDB1Q86UU1 1377 aa8.73□□□□□ -1.01
ARHGAP28-208ENST00000577524 NUP153P49790 1475 aaKnown RBP8.73□□□□□ -1.01
ARHGAP28-208ENST00000577524 CFAP43Q8NDM7 1665 aa8.72□□□□□ -1.01
ARHGAP28-208ENST00000577524 ARHGAP35Q9NRY4 1499 aa8.7□□□□□ -1.02
ARHGAP28-208ENST00000577524 PPRC1Q5VV67 1664 aaKnown RBP8.7□□□□□ -1.02
ARHGAP28-208ENST00000577524 COL17A1Q9UMD9 1497 aaPredicted RBP8.7□□□□□ -1.02
ARHGAP28-208ENST00000577524 CLIP1P30622 1438 aa8.69□□□□□ -1.02
ARHGAP28-208ENST00000577524 HECW1Q76N89 1606 aa8.69□□□□□ -1.02
ARHGAP28-208ENST00000577524 KDM4FA0A1W2PPD8 638 aa8.68□□□□□ -1.02
ARHGAP28-208ENST00000577524 NEO1Q92859 1461 aa8.68□□□□□ -1.02
ARHGAP28-208ENST00000577524 ABCA9Q8IUA7 1624 aa8.68□□□□□ -1.02
ARHGAP28-208ENST00000577524 RAPGEF3O95398 923 aa8.67□□□□□ -1.02
ARHGAP28-208ENST00000577524 CDK13Q14004 1512 aaKnown RBP8.67□□□□□ -1.02
ARHGAP28-208ENST00000577524 ARID4BQ4LE39 1312 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms