RNA–Protein interactions for RNA: ENST00000575815.5

NCBP3-205, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 4,096 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-205ENST00000575815 VPS8Q8N3P4 1428 aa12.15□□□□□ -0.46
NCBP3-205ENST00000575815 POLR3GLQ9BT43 218 aa12.15□□□□□ -0.47
NCBP3-205ENST00000575815 RRP7BPQ9NSQ0 103 aa12.14□□□□□ -0.47
NCBP3-205ENST00000575815 CNGB1Q14028 1251 aaPredicted RBP12.12□□□□□ -0.47
NCBP3-205ENST00000575815 TOP2BQ02880 1626 aa12.12□□□□□ -0.47
NCBP3-205ENST00000575815 ZNF326Q5BKZ1 582 aaKnown RBP12.11□□□□□ -0.47
NCBP3-205ENST00000575815 MRC2Q9UBG0 1479 aa12.11□□□□□ -0.47
NCBP3-205ENST00000575815 FHAD1B1AJZ9 1412 aa12.1□□□□□ -0.47
NCBP3-205ENST00000575815 CFDP1Q9UEE9 299 aaPredicted RBP12.09□□□□□ -0.47
NCBP3-205ENST00000575815 LAMC3Q9Y6N6 1575 aa12.08□□□□□ -0.47
NCBP3-205ENST00000575815 TSPY4P0CV99 314 aa12.07□□□□□ -0.48
NCBP3-205ENST00000575815 TSPY10P0CW01 314 aa12.07□□□□□ -0.48
NCBP3-205ENST00000575815 YTHDC1Q96MU7 727 aaKnown RBP12.07□□□□□ -0.48
NCBP3-205ENST00000575815 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.07□□□□□ -0.489e-8■■■■□ 23.1
NCBP3-205ENST00000575815 URB2Q14146 1524 aaKnown RBP12.06□□□□□ -0.48
NCBP3-205ENST00000575815 DNMBPQ6XZF7 1577 aa12.04□□□□□ -0.48
NCBP3-205ENST00000575815 CARMIL2Q6F5E8 1435 aa12.04□□□□□ -0.48
NCBP3-205ENST00000575815 PRXQ9BXM0 1461 aa12.02□□□□□ -0.48
NCBP3-205ENST00000575815 GRIN2BQ13224 1484 aa12.01□□□□□ -0.49
NCBP3-205ENST00000575815 FMN1Q68DA7 1419 aa12.01□□□□□ -0.49
NCBP3-205ENST00000575815 CCNB3Q8WWL7 1395 aa12□□□□□ -0.49
NCBP3-205ENST00000575815 ZNF608Q9ULD9 1512 aaPredicted RBP11.99□□□□□ -0.49
NCBP3-205ENST00000575815 OSCARQ8IYS5 282 aa11.99□□□□□ -0.49
NCBP3-205ENST00000575815 IFT140Q96RY7 1462 aa11.99□□□□□ -0.49
NCBP3-205ENST00000575815 PLPPR3Q6T4P5 718 aa11.99□□□□□ -0.49
NCBP3-205ENST00000575815 DIEXFQ68CQ4 756 aaKnown RBP11.97□□□□□ -0.49
NCBP3-205ENST00000575815 CYB5RLQ6IPT4 315 aa11.97□□□□□ -0.49
NCBP3-205ENST00000575815 ABCA10Q8WWZ4 1543 aa11.97□□□□□ -0.49
NCBP3-205ENST00000575815 ARAP1Q96P48 1450 aa11.96□□□□□ -0.5
NCBP3-205ENST00000575815 SNAPC4Q5SXM2 1469 aa11.95□□□□□ -0.5
NCBP3-205ENST00000575815 PTPRGP23470 1445 aa11.94□□□□□ -0.5
NCBP3-205ENST00000575815 SLC4A1APQ9BWU0 796 aaKnown RBP11.94□□□□□ -0.5
NCBP3-205ENST00000575815 KIF21BO75037 1637 aa11.94□□□□□ -0.5
NCBP3-205ENST00000575815 ARHGAP35Q9NRY4 1499 aa11.93□□□□□ -0.5
NCBP3-205ENST00000575815 CHGAP10645 457 aaKnown RBP11.92□□□□□ -0.5
NCBP3-205ENST00000575815 SIN3AQ96ST3 1273 aa11.91□□□□□ -0.5
NCBP3-205ENST00000575815 HIRIP3Q9BW71 556 aaPredicted RBP11.91□□□□□ -0.5
NCBP3-205ENST00000575815 ERICH3Q5RHP9 1530 aa11.9□□□□□ -0.5
NCBP3-205ENST00000575815 SENP3Q9H4L4 574 aaPredicted RBP11.9□□□□□ -0.5
NCBP3-205ENST00000575815 TONSLQ96HA7 1378 aa11.9□□□□□ -0.51
NCBP3-205ENST00000575815 ZNF316A6NFI3 1004 aaPredicted RBP11.89□□□□□ -0.51
NCBP3-205ENST00000575815 KDM2AQ9Y2K7 1162 aa11.89□□□□□ -0.51
NCBP3-205ENST00000575815 BIVM-ERCC5R4GMW8 1640 aa11.88□□□□□ -0.51
NCBP3-205ENST00000575815 HNRNPMP52272 730 aaKnown RBP eCLIP11.88□□□□□ -0.51
NCBP3-205ENST00000575815 TRHP20396 242 aaPredicted RBP11.86□□□□□ -0.51
NCBP3-205ENST00000575815 FOXD1Q16676 465 aa11.86□□□□□ -0.51
NCBP3-205ENST00000575815 ESF1Q9H501 851 aaKnown RBP11.86□□□□□ -0.51
NCBP3-205ENST00000575815 RGL3Q3MIN7 710 aa11.85□□□□□ -0.51
NCBP3-205ENST00000575815 ZNF644Q9H582 1327 aaPredicted RBP11.85□□□□□ -0.51
NCBP3-205ENST00000575815 PRG4Q92954 1404 aaPredicted RBP11.85□□□□□ -0.51
NCBP3-205ENST00000575815 CENPBP07199 599 aaPredicted RBP11.84□□□□□ -0.51
NCBP3-205ENST00000575815 KIF21AQ7Z4S6 1674 aa11.83□□□□□ -0.51
NCBP3-205ENST00000575815 BCANQ96GW7 911 aa11.82□□□□□ -0.52
NCBP3-205ENST00000575815 EFCAB2Q5VUJ9 269 aa11.81□□□□□ -0.52
NCBP3-205ENST00000575815 PHLDB1Q86UU1 1377 aa11.81□□□□□ -0.52
NCBP3-205ENST00000575815 RAB3GAP2Q9H2M9 1393 aa11.8□□□□□ -0.52
NCBP3-205ENST00000575815 STAG3Q9UJ98 1225 aa11.8□□□□□ -0.52
NCBP3-205ENST00000575815 SETD5Q9C0A6 1442 aa11.78□□□□□ -0.52
NCBP3-205ENST00000575815 CCDC18Q5T9S5 1454 aa11.78□□□□□ -0.52
NCBP3-205ENST00000575815 KIAA0586Q9BVV6 1533 aa11.78□□□□□ -0.52
NCBP3-205ENST00000575815 PRDM2Q13029 1718 aa11.78□□□□□ -0.52
NCBP3-205ENST00000575815 GRIN2AQ12879 1464 aa11.78□□□□□ -0.52
NCBP3-205ENST00000575815 CASKIN1Q8WXD9 1431 aa11.77□□□□□ -0.52
NCBP3-205ENST00000575815 DDX10Q13206 875 aaKnown RBP11.77□□□□□ -0.52
NCBP3-205ENST00000575815 MLECQ14165 292 aa11.77□□□□□ -0.52
NCBP3-205ENST00000575815 ARID4BQ4LE39 1312 aaPredicted RBP11.77□□□□□ -0.52
NCBP3-205ENST00000575815 SYNJ2O15056 1496 aa11.77□□□□□ -0.53
NCBP3-205ENST00000575815 GGT6Q6P531 493 aa11.76□□□□□ -0.53
NCBP3-205ENST00000575815 LRRC9Q6ZRR7 1453 aa11.76□□□□□ -0.53
NCBP3-205ENST00000575815 MAGI1Q96QZ7 1491 aaPredicted RBP11.73□□□□□ -0.53
NCBP3-205ENST00000575815 PKD2Q13563 968 aa11.73□□□□□ -0.53
NCBP3-205ENST00000575815 MPHOSPH9Q99550 1183 aa11.72□□□□□ -0.53
NCBP3-205ENST00000575815 PLB1Q6P1J6 1458 aa11.72□□□□□ -0.53
NCBP3-205ENST00000575815 IQGAP2Q13576 1575 aa11.71□□□□□ -0.53
NCBP3-205ENST00000575815 CUL7Q14999 1698 aa11.7□□□□□ -0.54
NCBP3-205ENST00000575815 KIF3BO15066 747 aa11.7□□□□□ -0.54
NCBP3-205ENST00000575815 NUP155O75694 1391 aa11.7□□□□□ -0.54
NCBP3-205ENST00000575815 NCOA2Q15596 1464 aa11.69□□□□□ -0.54
NCBP3-205ENST00000575815 SPAG9O60271 1321 aaKnown RBP11.69□□□□□ -0.54
NCBP3-205ENST00000575815 ANP32CO43423 234 aa11.69□□□□□ -0.54
NCBP3-205ENST00000575815 FGD6Q6ZV73 1430 aa11.69□□□□□ -0.54
NCBP3-205ENST00000575815 EFCAB5A4FU69 1503 aa11.69□□□□□ -0.54
NCBP3-205ENST00000575815 CDK13Q14004 1512 aaKnown RBP11.69□□□□□ -0.54
NCBP3-205ENST00000575815 FYCO1Q9BQS8 1478 aa11.69□□□□□ -0.54
NCBP3-205ENST00000575815 FAM69CQ0P6D2 419 aa11.68□□□□□ -0.54
NCBP3-205ENST00000575815 AFAP1Q8N556 730 aa11.68□□□□□ -0.54
NCBP3-205ENST00000575815 ANKRD30AQ9BXX3 1397 aa11.68□□□□□ -0.54
NCBP3-205ENST00000575815 MYOM3Q5VTT5 1437 aa11.67□□□□□ -0.54
NCBP3-205ENST00000575815 WDR62O43379 1518 aa11.67□□□□□ -0.54
NCBP3-205ENST00000575815 DCAF11Q8TEB1 546 aa11.65□□□□□ -0.54
NCBP3-205ENST00000575815 EIF4G2P78344 907 aaKnown RBP eCLIP11.64□□□□□ -0.558e-7■■■■■ 28.7
NCBP3-205ENST00000575815 EPRSP07814 1512 aaKnown RBP11.64□□□□□ -0.55
NCBP3-205ENST00000575815 DHX57Q6P158 1386 aaKnown RBP11.63□□□□□ -0.55
NCBP3-205ENST00000575815 PCF11O94913 1555 aaKnown RBP11.63□□□□□ -0.55
NCBP3-205ENST00000575815 RSPH4AQ5TD94 716 aa11.63□□□□□ -0.55
NCBP3-205ENST00000575815 EIF4G3O43432 1585 aaKnown RBP11.63□□□□□ -0.55
NCBP3-205ENST00000575815 CLSPNQ9HAW4 1339 aa11.63□□□□□ -0.55
NCBP3-205ENST00000575815 TIAM1Q13009 1591 aa11.62□□□□□ -0.55
NCBP3-205ENST00000575815 UACAQ9BZF9 1416 aa11.62□□□□□ -0.55
NCBP3-205ENST00000575815 MIER1Q8N108 512 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms