RNA–Protein interactions for RNA: ENST00000575547.1

POLR2A-204, Transcript of RNA polymerase II subunit A, humanhuman

TSL 3

Gene POLR2A, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-204ENST00000575547 KIF27Q86VH2 1401 aa11.35□□□□□ -0.59
POLR2A-204ENST00000575547 SHROOM2Q13796 1616 aa11.32□□□□□ -0.6
POLR2A-204ENST00000575547 TTBK1Q5TCY1 1321 aaPredicted RBP11.32□□□□□ -0.6
POLR2A-204ENST00000575547 CARMIL1Q5VZK9 1371 aa11.3□□□□□ -0.6
POLR2A-204ENST00000575547 FAM69CQ0P6D2 419 aa11.3□□□□□ -0.6
POLR2A-204ENST00000575547 KIAA0586Q9BVV6 1533 aa11.28□□□□□ -0.6
POLR2A-204ENST00000575547 RUSC2Q8N2Y8 1516 aa11.25□□□□□ -0.61
POLR2A-204ENST00000575547 CUL7Q14999 1698 aa11.24□□□□□ -0.61
POLR2A-204ENST00000575547 PTPRGP23470 1445 aa11.24□□□□□ -0.61
POLR2A-204ENST00000575547 CARMIL2Q6F5E8 1435 aa11.22□□□□□ -0.61
POLR2A-204ENST00000575547 ABCC10Q5T3U5 1492 aa11.19□□□□□ -0.62
POLR2A-204ENST00000575547 TNIKQ9UKE5 1360 aa11.19□□□□□ -0.62
POLR2A-204ENST00000575547 KIF13AQ9H1H9 1805 aa11.18□□□□□ -0.62
POLR2A-204ENST00000575547 ADCY10Q96PN6 1610 aa11.17□□□□□ -0.62
POLR2A-204ENST00000575547 RAPGEF2Q9Y4G8 1499 aa11.16□□□□□ -0.62
POLR2A-204ENST00000575547 MAPKBP1O60336 1514 aa11.15□□□□□ -0.62
POLR2A-204ENST00000575547 IQGAP2Q13576 1575 aa11.14□□□□□ -0.63
POLR2A-204ENST00000575547 UACAQ9BZF9 1416 aa11.12□□□□□ -0.63
POLR2A-204ENST00000575547 FAM9AQ8IZU1 332 aaPredicted RBP11.12□□□□□ -0.63
POLR2A-204ENST00000575547 DIP2BQ9P265 1576 aa11.11□□□□□ -0.63
POLR2A-204ENST00000575547 TSPOAP1O95153 1857 aa11.1□□□□□ -0.63
POLR2A-204ENST00000575547 ABCC2Q92887 1545 aa11.1□□□□□ -0.63
POLR2A-204ENST00000575547 ASXL2Q76L83 1435 aa11.09□□□□□ -0.63
POLR2A-204ENST00000575547 PLB1Q6P1J6 1458 aa11.09□□□□□ -0.63
POLR2A-204ENST00000575547 DISP1Q96F81 1524 aa11.09□□□□□ -0.63
POLR2A-204ENST00000575547 UHRF1BP1LA0JNW5 1464 aa11.07□□□□□ -0.64
POLR2A-204ENST00000575547 CHIC1Q5VXU3 224 aa11.07□□□□□ -0.64
POLR2A-204ENST00000575547 UGGT2Q9NYU1 1516 aa11.06□□□□□ -0.64
POLR2A-204ENST00000575547 KCNH8Q96L42 1107 aa11.06□□□□□ -0.64
POLR2A-204ENST00000575547 KDM6BO15054 1643 aa11.06□□□□□ -0.64
POLR2A-204ENST00000575547 P3H3Q8IVL6 736 aa11.05□□□□□ -0.64
POLR2A-204ENST00000575547 CSRNP3Q8WYN3 585 aa11.04□□□□□ -0.64
POLR2A-204ENST00000575547 KDM4FA0A1W2PPD8 638 aa11.03□□□□□ -0.64
POLR2A-204ENST00000575547 GOLGA3Q08378 1498 aa11.03□□□□□ -0.64
POLR2A-204ENST00000575547 KDM5BQ9UGL1 1544 aa11.02□□□□□ -0.65
POLR2A-204ENST00000575547 KIAA0556O60303 1618 aa11.02□□□□□ -0.65
POLR2A-204ENST00000575547 ARID3CA6NKF2 412 aa11.01□□□□□ -0.65
POLR2A-204ENST00000575547 RANGAP1P46060 587 aaPredicted RBP11.01□□□□□ -0.65
POLR2A-204ENST00000575547 GLI2P10070 1586 aa11.01□□□□□ -0.65
POLR2A-204ENST00000575547 PRXQ9BXM0 1461 aa11□□□□□ -0.65
POLR2A-204ENST00000575547 EPRSP07814 1512 aaKnown RBP11□□□□□ -0.65
POLR2A-204ENST00000575547 ZCCHC11Q5TAX3 1644 aaKnown RBP10.98□□□□□ -0.65
POLR2A-204ENST00000575547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.98□□□□□ -0.65
POLR2A-204ENST00000575547 HNRNPUL2Q1KMD3 747 aaKnown RBP10.98□□□□□ -0.65
POLR2A-204ENST00000575547 TEX14Q8IWB6 1497 aa10.98□□□□□ -0.65
POLR2A-204ENST00000575547 CTTNBP2Q8WZ74 1663 aa10.98□□□□□ -0.65
POLR2A-204ENST00000575547 WDR7Q9Y4E6 1490 aa10.96□□□□□ -0.65
POLR2A-204ENST00000575547 CD109Q6YHK3 1445 aa10.96□□□□□ -0.65
POLR2A-204ENST00000575547 COL17A1Q9UMD9 1497 aaPredicted RBP10.94□□□□□ -0.66
POLR2A-204ENST00000575547 PPRC1Q5VV67 1664 aaKnown RBP10.94□□□□□ -0.66
POLR2A-204ENST00000575547 MAP3K4Q9Y6R4 1608 aa10.92□□□□□ -0.66
POLR2A-204ENST00000575547 ABCA8O94911 1581 aa10.92□□□□□ -0.66
POLR2A-204ENST00000575547 EHMT2Q96KQ7 1210 aa10.91□□□□□ -0.66
POLR2A-204ENST00000575547 EEA1Q15075 1411 aa10.91□□□□□ -0.66
POLR2A-204ENST00000575547 ATP10BO94823 1461 aa10.9□□□□□ -0.66
POLR2A-204ENST00000575547 MAGI3Q5TCQ9 1506 aa10.89□□□□□ -0.67
POLR2A-204ENST00000575547 PLEKHD1A6NEE1 506 aa10.88□□□□□ -0.67
POLR2A-204ENST00000575547 UBTFP17480 764 aaKnown RBP10.88□□□□□ -0.67
POLR2A-204ENST00000575547 ADGRL1O94910 1474 aa10.87□□□□□ -0.67
POLR2A-204ENST00000575547 CFAP43Q8NDM7 1665 aa10.86□□□□□ -0.67
POLR2A-204ENST00000575547 ATP1B4Q9UN42 357 aaPredicted RBP10.85□□□□□ -0.67
POLR2A-204ENST00000575547 RAPGEF3O95398 923 aa10.84□□□□□ -0.67
POLR2A-204ENST00000575547 PHLDB1Q86UU1 1377 aa10.84□□□□□ -0.67
POLR2A-204ENST00000575547 FHOD3Q2V2M9 1422 aa10.84□□□□□ -0.67
POLR2A-204ENST00000575547 SAMD9Q5K651 1589 aa10.82□□□□□ -0.68
POLR2A-204ENST00000575547 RAPGEF6Q8TEU7 1601 aa10.82□□□□□ -0.68
POLR2A-204ENST00000575547 ARID4BQ4LE39 1312 aaPredicted RBP10.81□□□□□ -0.68
POLR2A-204ENST00000575547 ARAP3Q8WWN8 1544 aa10.8□□□□□ -0.68
POLR2A-204ENST00000575547 NUP153P49790 1475 aaKnown RBP10.79□□□□□ -0.68
POLR2A-204ENST00000575547 ABCA9Q8IUA7 1624 aa10.77□□□□□ -0.68
POLR2A-204ENST00000575547 NEO1Q92859 1461 aa10.77□□□□□ -0.69
POLR2A-204ENST00000575547 CDK11AQ9UQ88 783 aaPredicted RBP10.77□□□□□ -0.69
POLR2A-204ENST00000575547 KIF21BO75037 1637 aa10.76□□□□□ -0.69
POLR2A-204ENST00000575547 EFCAB5A4FU69 1503 aa10.75□□□□□ -0.69
POLR2A-204ENST00000575547 AKNAQ7Z591 1439 aa10.74□□□□□ -0.69
POLR2A-204ENST00000575547 ILDR1Q86SU0 546 aaPredicted RBP10.73□□□□□ -0.69
POLR2A-204ENST00000575547 DENND4BO75064 1496 aaPredicted RBP10.73□□□□□ -0.69
POLR2A-204ENST00000575547 PLPPR3Q6T4P5 718 aa10.72□□□□□ -0.69
POLR2A-204ENST00000575547 FANCAO15360 1455 aa10.71□□□□□ -0.69
POLR2A-204ENST00000575547 EFCAB2Q5VUJ9 269 aa10.71□□□□□ -0.69
POLR2A-204ENST00000575547 FMN1Q68DA7 1419 aa10.71□□□□□ -0.69
POLR2A-204ENST00000575547 MYT1LQ9UL68 1186 aa10.71□□□□□ -0.69
POLR2A-204ENST00000575547 HECW2Q9P2P5 1572 aa10.7□□□□□ -0.7
POLR2A-204ENST00000575547 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.69□□□□□ -0.7
POLR2A-204ENST00000575547 MLECQ14165 292 aa10.69□□□□□ -0.7
POLR2A-204ENST00000575547 CDK13Q14004 1512 aaKnown RBP10.68□□□□□ -0.7
POLR2A-204ENST00000575547 PTPRMP28827 1452 aa10.68□□□□□ -0.7
POLR2A-204ENST00000575547 ARHGAP35Q9NRY4 1499 aa10.68□□□□□ -0.7
POLR2A-204ENST00000575547 PLCH2O75038 1416 aa10.67□□□□□ -0.7
POLR2A-204ENST00000575547 SCAPERQ9BY12 1400 aa10.67□□□□□ -0.7
POLR2A-204ENST00000575547 POGZQ7Z3K3 1410 aa10.67□□□□□ -0.7
POLR2A-204ENST00000575547 CFAP74Q9C0B2 1584 aa10.65□□□□□ -0.7
POLR2A-204ENST00000575547 TTC37Q6PGP7 1564 aa10.65□□□□□ -0.71
POLR2A-204ENST00000575547 CLIP1P30622 1438 aa10.64□□□□□ -0.71
POLR2A-204ENST00000575547 FRMPD1Q5SYB0 1578 aa10.64□□□□□ -0.71
POLR2A-204ENST00000575547 ADAMTSL3P82987 1691 aa10.63□□□□□ -0.71
POLR2A-204ENST00000575547 HECW1Q76N89 1606 aa10.63□□□□□ -0.71
POLR2A-204ENST00000575547 AFAP1Q8N556 730 aa10.63□□□□□ -0.71
POLR2A-204ENST00000575547 MAGI2Q86UL8 1455 aa10.62□□□□□ -0.71
POLR2A-204ENST00000575547 BCORL1Q5H9F3 1711 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms