RNA–Protein interactions for RNA: ENST00000575225.5

NOMO3-213, Transcript of NODAL modulator 3, humanhuman

TSL 1 (best)

Gene NOMO3, Length 3,765 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOMO3-213ENST00000575225 SMARCA4P51532 1647 aa22.45■■□□□ 1.19
NOMO3-213ENST00000575225 NPM2Q86SE8 214 aaKnown RBP22.42■■□□□ 1.18
NOMO3-213ENST00000575225 MRS2Q9HD23 443 aa22.41■■□□□ 1.18
NOMO3-213ENST00000575225 KIF27Q86VH2 1401 aa22.38■■□□□ 1.17
NOMO3-213ENST00000575225 B4GALNT3Q6L9W6 998 aa22.37■■□□□ 1.17
NOMO3-213ENST00000575225 ZNF777Q9ULD5 760 aaPredicted RBP22.37■■□□□ 1.17
NOMO3-213ENST00000575225 FOXD1Q16676 465 aa22.37■■□□□ 1.17
NOMO3-213ENST00000575225 BCL11AQ9H165 835 aa22.36■■□□□ 1.17
NOMO3-213ENST00000575225 MTUS2Q5JR59 1369 aa22.34■■□□□ 1.17
NOMO3-213ENST00000575225 RTL5Q5HYW3 569 aaPredicted RBP22.28■■□□□ 1.16
NOMO3-213ENST00000575225 SYNJ1O43426 1573 aa22.28■■□□□ 1.16
NOMO3-213ENST00000575225 KIF21BO75037 1637 aa22.28■■□□□ 1.16
NOMO3-213ENST00000575225 SETD5Q9C0A6 1442 aa22.27■■□□□ 1.15
NOMO3-213ENST00000575225 CUX2O14529 1486 aa22.26■■□□□ 1.15
NOMO3-213ENST00000575225 FBLN2P98095 1184 aa22.25■■□□□ 1.15
NOMO3-213ENST00000575225 PPP1R15AO75807 674 aaPredicted RBP22.23■■□□□ 1.15
NOMO3-213ENST00000575225 EIF4G2P78344 907 aaKnown RBP eCLIP22.21■■□□□ 1.15
NOMO3-213ENST00000575225 CARMIL1Q5VZK9 1371 aa22.2■■□□□ 1.14
NOMO3-213ENST00000575225 CCDC136Q96JN2 1154 aa22.19■■□□□ 1.14
NOMO3-213ENST00000575225 KDM2AQ9Y2K7 1162 aa22.19■■□□□ 1.14
NOMO3-213ENST00000575225 ARAP1Q96P48 1450 aa22.18■■□□□ 1.14
NOMO3-213ENST00000575225 ATAD2BQ9ULI0 1458 aa22.17■■□□□ 1.14
NOMO3-213ENST00000575225 HSPA5P11021 654 aaKnown RBP22.15■■□□□ 1.14
NOMO3-213ENST00000575225 UNC13AQ9UPW8 1703 aa22.13■■□□□ 1.13
NOMO3-213ENST00000575225 SLC4A1APQ9BWU0 796 aaKnown RBP22.1■■□□□ 1.13
NOMO3-213ENST00000575225 FHOD3Q2V2M9 1422 aa22.1■■□□□ 1.13
NOMO3-213ENST00000575225 ANP32AP39687 249 aaKnown RBP22.1■■□□□ 1.13
NOMO3-213ENST00000575225 DAXXQ9UER7 740 aaPredicted RBP22.1■■□□□ 1.13
NOMO3-213ENST00000575225 TMC1Q8TDI8 760 aa22.08■■□□□ 1.13
NOMO3-213ENST00000575225 PHLDB1Q86UU1 1377 aa22.08■■□□□ 1.12
NOMO3-213ENST00000575225 CCER2I3L3R5 266 aa22.06■■□□□ 1.12
NOMO3-213ENST00000575225 MYT1LQ9UL68 1186 aa22.01■■□□□ 1.11
NOMO3-213ENST00000575225 RTN4Q9NQC3 1192 aaKnown RBP21.99■■□□□ 1.11
NOMO3-213ENST00000575225 PPP4R2Q9NY27 417 aa21.99■■□□□ 1.11
NOMO3-213ENST00000575225 CCDC184Q52MB2 194 aa21.97■■□□□ 1.11
NOMO3-213ENST00000575225 ZBTB47Q9UFB7 747 aaPredicted RBP21.96■■□□□ 1.11
NOMO3-213ENST00000575225 L3MBTL2Q969R5 705 aa21.95■■□□□ 1.1
NOMO3-213ENST00000575225 BICRAQ9NZM4 1560 aa21.95■■□□□ 1.1
NOMO3-213ENST00000575225 ARHGAP35Q9NRY4 1499 aa21.94■■□□□ 1.1
NOMO3-213ENST00000575225 WDR97A6NE52 1622 aa21.94■■□□□ 1.1
NOMO3-213ENST00000575225 EIF4G1Q04637 1599 aaKnown RBP21.93■■□□□ 1.1
NOMO3-213ENST00000575225 LAS1LQ9Y4W2 734 aaKnown RBP21.92■■□□□ 1.1
NOMO3-213ENST00000575225 RGL3Q3MIN7 710 aa21.92■■□□□ 1.1
NOMO3-213ENST00000575225 TDRD9Q8NDG6 1382 aaKnown RBP21.91■■□□□ 1.1
NOMO3-213ENST00000575225 FHAD1B1AJZ9 1412 aa21.91■■□□□ 1.1
NOMO3-213ENST00000575225 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.91■■□□□ 1.1
NOMO3-213ENST00000575225 IGF1RP08069 1367 aa21.9■■□□□ 1.1
NOMO3-213ENST00000575225 DEKP35659 375 aaKnown RBP21.9■■□□□ 1.1
NOMO3-213ENST00000575225 RRBP1Q9P2E9 1410 aaKnown RBP21.88■■□□□ 1.09
NOMO3-213ENST00000575225 TIMELESSQ9UNS1 1208 aa21.86■■□□□ 1.09
NOMO3-213ENST00000575225 MSH5O43196 834 aa21.85■■□□□ 1.09
NOMO3-213ENST00000575225 MPHOSPH9Q99550 1183 aa21.85■■□□□ 1.09
NOMO3-213ENST00000575225 NOP58Q9Y2X3 529 aaKnown RBP21.84■■□□□ 1.09
NOMO3-213ENST00000575225 PRXQ9BXM0 1461 aa21.83■■□□□ 1.09
NOMO3-213ENST00000575225 WASHC2AQ641Q2 1341 aa21.81■■□□□ 1.08
NOMO3-213ENST00000575225 ARXQ96QS3 562 aa21.79■■□□□ 1.08
NOMO3-213ENST00000575225 CARD11Q9BXL7 1154 aa21.77■■□□□ 1.08
NOMO3-213ENST00000575225 PRKRIP1Q9H875 184 aaPredicted RBP21.77■■□□□ 1.08
NOMO3-213ENST00000575225 LRRC9Q6ZRR7 1453 aa21.77■■□□□ 1.07
NOMO3-213ENST00000575225 SENP3Q9H4L4 574 aaPredicted RBP21.75■■□□□ 1.07
NOMO3-213ENST00000575225 CCDC18Q5T9S5 1454 aa21.74■■□□□ 1.07
NOMO3-213ENST00000575225 EIF5BO60841 1220 aaKnown RBP21.72■■□□□ 1.07
NOMO3-213ENST00000575225 CC2D1BQ5T0F9 858 aaKnown RBP21.72■■□□□ 1.07
NOMO3-213ENST00000575225 CFDP1Q9UEE9 299 aaPredicted RBP21.72■■□□□ 1.07
NOMO3-213ENST00000575225 RAD54L2Q9Y4B4 1467 aa21.72■■□□□ 1.07
NOMO3-213ENST00000575225 CUX1P39880 1505 aa21.71■■□□□ 1.07
NOMO3-213ENST00000575225 C11orf95C9JLR9 678 aaPredicted RBP21.68■■□□□ 1.06
NOMO3-213ENST00000575225 ZNF644Q9H582 1327 aaPredicted RBP21.68■■□□□ 1.06
NOMO3-213ENST00000575225 DCAF11Q8TEB1 546 aa21.67■■□□□ 1.06
NOMO3-213ENST00000575225 TOP2BQ02880 1626 aa21.66■■□□□ 1.06
NOMO3-213ENST00000575225 PAK3O75914 559 aaPredicted RBP21.66■■□□□ 1.06
NOMO3-213ENST00000575225 PKD2Q13563 968 aa21.66■■□□□ 1.06
NOMO3-213ENST00000575225 FGD5Q6ZNL6 1462 aa21.65■■□□□ 1.06
NOMO3-213ENST00000575225 NEFMP07197 916 aa21.65■■□□□ 1.06
NOMO3-213ENST00000575225 CADPSQ9ULU8 1353 aa21.64■■□□□ 1.05
NOMO3-213ENST00000575225 FMN1Q68DA7 1419 aa21.63■■□□□ 1.05
NOMO3-213ENST00000575225 CANXP27824 592 aaKnown RBP21.63■■□□□ 1.05
NOMO3-213ENST00000575225 TSPY4P0CV99 314 aa21.61■■□□□ 1.05
NOMO3-213ENST00000575225 TSPY10P0CW01 314 aa21.61■■□□□ 1.05
NOMO3-213ENST00000575225 PLIN1O60240 522 aa21.61■■□□□ 1.05
NOMO3-213ENST00000575225 MAPKBP1O60336 1514 aa21.61■■□□□ 1.05
NOMO3-213ENST00000575225 ERICH3Q5RHP9 1530 aa21.61■■□□□ 1.05
NOMO3-213ENST00000575225 FGD6Q6ZV73 1430 aa21.61■■□□□ 1.05
NOMO3-213ENST00000575225 RGS3P49796 1198 aa21.6■■□□□ 1.05
NOMO3-213ENST00000575225 NBPF8Q3BBV2 869 aa21.59■■□□□ 1.05
NOMO3-213ENST00000575225 KIF7Q2M1P5 1343 aa21.56■■□□□ 1.04
NOMO3-213ENST00000575225 FANCIQ9NVI1 1328 aa21.55■■□□□ 1.04
NOMO3-213ENST00000575225 PEG3Q9GZU2 1588 aa21.55■■□□□ 1.04
NOMO3-213ENST00000575225 SLC4A3P48751 1232 aa21.55■■□□□ 1.04
NOMO3-213ENST00000575225 CHMP7Q8WUX9 453 aaPredicted RBP21.54■■□□□ 1.04
NOMO3-213ENST00000575225 NUDCQ9Y266 331 aa21.54■■□□□ 1.04
NOMO3-213ENST00000575225 AKNAQ7Z591 1439 aa21.54■■□□□ 1.04
NOMO3-213ENST00000575225 TIAM1Q13009 1591 aa21.54■■□□□ 1.04
NOMO3-213ENST00000575225 EXOC6Q8TAG9 804 aa21.53■■□□□ 1.04
NOMO3-213ENST00000575225 ST20-MTHFSA0A0A6YYL1 179 aa21.51■■□□□ 1.03
NOMO3-213ENST00000575225 SKAP1Q86WV1 359 aa21.51■■□□□ 1.03
NOMO3-213ENST00000575225 ZBED9Q6R2W3 1325 aa21.51■■□□□ 1.03
NOMO3-213ENST00000575225 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.51■■□□□ 1.03
NOMO3-213ENST00000575225 UACAQ9BZF9 1416 aa21.5■■□□□ 1.03
NOMO3-213ENST00000575225 NEUROD2Q15784 382 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms