RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 JPH4Q96JJ6 628 aa37.13■■■■□ 3.53
SPNS3-203ENST00000575185 ADCY10Q96PN6 1610 aa37■■■■□ 3.51
SPNS3-203ENST00000575185 ABCC10Q5T3U5 1492 aa36.96■■■■□ 3.51
SPNS3-203ENST00000575185 DIP2BQ9P265 1576 aa36.95■■■■□ 3.51
SPNS3-203ENST00000575185 MAPKBP1O60336 1514 aa36.95■■■■□ 3.51
SPNS3-203ENST00000575185 FAM69CQ0P6D2 419 aa36.91■■■■□ 3.5
SPNS3-203ENST00000575185 NPM1P06748 294 aaKnown RBP eCLIP36.84■■■■□ 3.49
SPNS3-203ENST00000575185 KIAA0586Q9BVV6 1533 aa36.84■■■■□ 3.49
SPNS3-203ENST00000575185 CUL7Q14999 1698 aa36.83■■■■□ 3.49
SPNS3-203ENST00000575185 IGF1RP08069 1367 aa36.78■■■■□ 3.48
SPNS3-203ENST00000575185 TSPOAP1O95153 1857 aa36.78■■■■□ 3.48
SPNS3-203ENST00000575185 KIF27Q86VH2 1401 aa36.74■■■■□ 3.47
SPNS3-203ENST00000575185 KDM6BO15054 1643 aa36.74■■■■□ 3.47
SPNS3-203ENST00000575185 PTPRGP23470 1445 aa36.57■■■■□ 3.44
SPNS3-203ENST00000575185 TTBK1Q5TCY1 1321 aaPredicted RBP36.57■■■■□ 3.44
SPNS3-203ENST00000575185 CARMIL1Q5VZK9 1371 aa36.53■■■■□ 3.44
SPNS3-203ENST00000575185 KDM4FA0A1W2PPD8 638 aa36.51■■■■□ 3.44
SPNS3-203ENST00000575185 IQGAP2Q13576 1575 aa36.49■■■■□ 3.43
SPNS3-203ENST00000575185 ABCC2Q92887 1545 aa36.49■■■■□ 3.43
SPNS3-203ENST00000575185 PPRC1Q5VV67 1664 aaKnown RBP36.47■■■■□ 3.43
SPNS3-203ENST00000575185 TNIKQ9UKE5 1360 aa36.46■■■■□ 3.43
SPNS3-203ENST00000575185 CARMIL2Q6F5E8 1435 aa36.45■■■■□ 3.43
SPNS3-203ENST00000575185 ASXL2Q76L83 1435 aa36.42■■■■□ 3.42
SPNS3-203ENST00000575185 GLI2P10070 1586 aa36.37■■■■□ 3.41
SPNS3-203ENST00000575185 DISP1Q96F81 1524 aa36.36■■■■□ 3.41
SPNS3-203ENST00000575185 UHRF1BP1LA0JNW5 1464 aa36.34■■■■□ 3.41
SPNS3-203ENST00000575185 PLB1Q6P1J6 1458 aa36.34■■■■□ 3.41
SPNS3-203ENST00000575185 UACAQ9BZF9 1416 aa36.29■■■■□ 3.4
SPNS3-203ENST00000575185 ZCCHC11Q5TAX3 1644 aaKnown RBP36.23■■■■□ 3.39
SPNS3-203ENST00000575185 MAP3K4Q9Y6R4 1608 aa36.23■■■■□ 3.39
SPNS3-203ENST00000575185 UGGT2Q9NYU1 1516 aa36.21■■■■□ 3.39
SPNS3-203ENST00000575185 KIAA0556O60303 1618 aa36.2■■■■□ 3.39
SPNS3-203ENST00000575185 EPRSP07814 1512 aaKnown RBP36.2■■■■□ 3.39
SPNS3-203ENST00000575185 KDM5BQ9UGL1 1544 aa36.2■■■■□ 3.39
SPNS3-203ENST00000575185 COL17A1Q9UMD9 1497 aaPredicted RBP36.18■■■■□ 3.38
SPNS3-203ENST00000575185 ADGRL1O94910 1474 aa36.17■■■■□ 3.38
SPNS3-203ENST00000575185 RAPGEF2Q9Y4G8 1499 aa36.17■■■■□ 3.38
SPNS3-203ENST00000575185 CTTNBP2Q8WZ74 1663 aa36.05■■■■□ 3.36
SPNS3-203ENST00000575185 TEX14Q8IWB6 1497 aa36.05■■■■□ 3.36
SPNS3-203ENST00000575185 WDR7Q9Y4E6 1490 aa35.99■■■■□ 3.35
SPNS3-203ENST00000575185 ABCA8O94911 1581 aa35.87■■■■□ 3.33
SPNS3-203ENST00000575185 ILDR1Q86SU0 546 aaPredicted RBP35.87■■■■□ 3.33
SPNS3-203ENST00000575185 CFAP43Q8NDM7 1665 aa35.87■■■■□ 3.33
SPNS3-203ENST00000575185 HECW2Q9P2P5 1572 aa35.86■■■■□ 3.33
SPNS3-203ENST00000575185 GOLGA3Q08378 1498 aa35.81■■■■□ 3.32
SPNS3-203ENST00000575185 MAGI3Q5TCQ9 1506 aa35.78■■■■□ 3.32
SPNS3-203ENST00000575185 CD109Q6YHK3 1445 aa35.78■■■■□ 3.32
SPNS3-203ENST00000575185 KCNH8Q96L42 1107 aa35.74■■■■□ 3.31
SPNS3-203ENST00000575185 KIF21BO75037 1637 aa35.69■■■■□ 3.3
SPNS3-203ENST00000575185 PRXQ9BXM0 1461 aa35.69■■■■□ 3.3
SPNS3-203ENST00000575185 ARID3CA6NKF2 412 aa35.59■■■■□ 3.29
SPNS3-203ENST00000575185 ATP10BO94823 1461 aa35.53■■■■□ 3.28
SPNS3-203ENST00000575185 P3H3Q8IVL6 736 aa35.52■■■■□ 3.28
SPNS3-203ENST00000575185 ARAP3Q8WWN8 1544 aa35.52■■■■□ 3.28
SPNS3-203ENST00000575185 ABCA9Q8IUA7 1624 aa35.5■■■■□ 3.27
SPNS3-203ENST00000575185 SAMD9Q5K651 1589 aa35.46■■■■□ 3.27
SPNS3-203ENST00000575185 RAPGEF6Q8TEU7 1601 aa35.42■■■■□ 3.26
SPNS3-203ENST00000575185 ADAMTSL3P82987 1691 aa35.37■■■■□ 3.25
SPNS3-203ENST00000575185 FRMPD1Q5SYB0 1578 aa35.34■■■■□ 3.25
SPNS3-203ENST00000575185 RAPGEF3O95398 923 aa35.3■■■■□ 3.24
SPNS3-203ENST00000575185 FAM9AQ8IZU1 332 aaPredicted RBP35.3■■■■□ 3.24
SPNS3-203ENST00000575185 PTPRMP28827 1452 aa35.29■■■■□ 3.24
SPNS3-203ENST00000575185 NEO1Q92859 1461 aa35.28■■■■□ 3.24
SPNS3-203ENST00000575185 PHLDB1Q86UU1 1377 aa35.27■■■■□ 3.24
SPNS3-203ENST00000575185 NUP153P49790 1475 aaKnown RBP35.26■■■■□ 3.23
SPNS3-203ENST00000575185 BCORL1Q5H9F3 1711 aa35.26■■■■□ 3.23
SPNS3-203ENST00000575185 MADDQ8WXG6 1647 aa35.22■■■■□ 3.23
SPNS3-203ENST00000575185 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.22■■■■□ 3.23
SPNS3-203ENST00000575185 HNRNPUL2Q1KMD3 747 aaKnown RBP35.22■■■■□ 3.23
SPNS3-203ENST00000575185 CSRNP3Q8WYN3 585 aa35.21■■■■□ 3.23
SPNS3-203ENST00000575185 FHOD3Q2V2M9 1422 aa35.18■■■■□ 3.22
SPNS3-203ENST00000575185 RANGAP1P46060 587 aaPredicted RBP35.16■■■■□ 3.22
SPNS3-203ENST00000575185 RICTORQ6R327 1708 aa35.15■■■■□ 3.22
SPNS3-203ENST00000575185 ARHGEF40Q8TER5 1519 aa35.14■■■■□ 3.22
SPNS3-203ENST00000575185 RIMS1Q86UR5 1692 aaKnown RBP35.1■■■■□ 3.21
SPNS3-203ENST00000575185 ARID4BQ4LE39 1312 aaPredicted RBP35.08■■■■□ 3.21
SPNS3-203ENST00000575185 PCF11O94913 1555 aaKnown RBP35.08■■■■□ 3.21
SPNS3-203ENST00000575185 TTC37Q6PGP7 1564 aa35.05■■■■□ 3.2
SPNS3-203ENST00000575185 LMTK3Q96Q04 1460 aa35.04■■■■□ 3.2
SPNS3-203ENST00000575185 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.04■■■■□ 3.2
SPNS3-203ENST00000575185 CFAP74Q9C0B2 1584 aa35.04■■■■□ 3.2
SPNS3-203ENST00000575185 DENND4BO75064 1496 aaPredicted RBP35.03■■■■□ 3.2
SPNS3-203ENST00000575185 FBXO41Q8TF61 875 aa35.02■■■■□ 3.2
SPNS3-203ENST00000575185 SIGLEC1Q9BZZ2 1709 aa35.02■■■■□ 3.2
SPNS3-203ENST00000575185 FANCAO15360 1455 aa35.01■■■■□ 3.19
SPNS3-203ENST00000575185 AKNAQ7Z591 1439 aa35■■■■□ 3.19
SPNS3-203ENST00000575185 EEA1Q15075 1411 aa34.98■■■■□ 3.19
SPNS3-203ENST00000575185 PLEKHD1A6NEE1 506 aa34.97■■■■□ 3.19
SPNS3-203ENST00000575185 ZMYM4Q5VZL5 1548 aa34.95■■■■□ 3.19
SPNS3-203ENST00000575185 EFCAB5A4FU69 1503 aa34.94■■■■□ 3.18
SPNS3-203ENST00000575185 CDK13Q14004 1512 aaKnown RBP34.92■■■■□ 3.18
SPNS3-203ENST00000575185 ZFYVE16Q7Z3T8 1539 aa34.91■■■■□ 3.18
SPNS3-203ENST00000575185 YEATS2Q9ULM3 1422 aa34.89■■■■□ 3.18
SPNS3-203ENST00000575185 HECW1Q76N89 1606 aa34.85■■■■□ 3.17
SPNS3-203ENST00000575185 PLPPR3Q6T4P5 718 aa34.84■■■■□ 3.17
SPNS3-203ENST00000575185 FER1L4A9Z1Z3 1794 aa34.82■■■■□ 3.17
SPNS3-203ENST00000575185 HSPA2P54652 639 aa34.8■■■■□ 3.16
SPNS3-203ENST00000575185 POGZQ7Z3K3 1410 aa34.8■■■■□ 3.16
SPNS3-203ENST00000575185 MAGI2Q86UL8 1455 aa34.77■■■■□ 3.16
SPNS3-203ENST00000575185 SCAPERQ9BY12 1400 aa34.73■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms