RNA–Protein interactions for RNA: ENST00000573924.1

RPA1-205, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 574 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-205ENST00000573924 CNKSR2Q8WXI2 1034 aa12.98□□□□□ -0.33
RPA1-205ENST00000573924 WRNQ14191 1432 aaPredicted RBP eCLIP12.96□□□□□ -0.33
RPA1-205ENST00000573924 GRIN2AQ12879 1464 aa12.95□□□□□ -0.34
RPA1-205ENST00000573924 ABCA5Q8WWZ7 1642 aa12.95□□□□□ -0.34
RPA1-205ENST00000573924 FHAD1B1AJZ9 1412 aa12.9□□□□□ -0.34
RPA1-205ENST00000573924 NPM1P06748 294 aaKnown RBP eCLIP12.9□□□□□ -0.34
RPA1-205ENST00000573924 NUP160Q12769 1436 aa12.89□□□□□ -0.35
RPA1-205ENST00000573924 CEP170Q5SW79 1584 aa12.88□□□□□ -0.35
RPA1-205ENST00000573924 ADAMTS12P58397 1594 aa12.87□□□□□ -0.35
RPA1-205ENST00000573924 ERICH3Q5RHP9 1530 aa12.87□□□□□ -0.35
RPA1-205ENST00000573924 SHROOM2Q13796 1616 aa12.84□□□□□ -0.35
RPA1-205ENST00000573924 TOP2BQ02880 1626 aa12.83□□□□□ -0.36
RPA1-205ENST00000573924 PRG4Q92954 1404 aaPredicted RBP12.82□□□□□ -0.36
RPA1-205ENST00000573924 BIVM-ERCC5R4GMW8 1640 aa12.81□□□□□ -0.36
RPA1-205ENST00000573924 JPH4Q96JJ6 628 aa12.81□□□□□ -0.36
RPA1-205ENST00000573924 ERCC6L2Q5T890 1561 aa12.81□□□□□ -0.36
RPA1-205ENST00000573924 SUPT5HO00267 1087 aaKnown RBP12.8□□□□□ -0.36
RPA1-205ENST00000573924 MSH5O43196 834 aa12.78□□□□□ -0.36
RPA1-205ENST00000573924 FAM69CQ0P6D2 419 aa12.78□□□□□ -0.36
RPA1-205ENST00000573924 ABCC10Q5T3U5 1492 aa12.75□□□□□ -0.37
RPA1-205ENST00000573924 KIF13AQ9H1H9 1805 aa12.75□□□□□ -0.37
RPA1-205ENST00000573924 MAPKBP1O60336 1514 aa12.74□□□□□ -0.37
RPA1-205ENST00000573924 ZBTB22O15209 634 aa12.7□□□□□ -0.38
RPA1-205ENST00000573924 RUSC2Q8N2Y8 1516 aa12.7□□□□□ -0.38
RPA1-205ENST00000573924 KIAA0586Q9BVV6 1533 aa12.68□□□□□ -0.38
RPA1-205ENST00000573924 KDM6BO15054 1643 aa12.68□□□□□ -0.38
RPA1-205ENST00000573924 DIP2BQ9P265 1576 aa12.67□□□□□ -0.38
RPA1-205ENST00000573924 CARMIL2Q6F5E8 1435 aa12.65□□□□□ -0.38
RPA1-205ENST00000573924 KIF27Q86VH2 1401 aa12.65□□□□□ -0.38
RPA1-205ENST00000573924 CUL7Q14999 1698 aa12.64□□□□□ -0.39
RPA1-205ENST00000573924 FOXD4L1Q9NU39 408 aa12.64□□□□□ -0.39
RPA1-205ENST00000573924 ADCY10Q96PN6 1610 aa12.63□□□□□ -0.39
RPA1-205ENST00000573924 PTPRGP23470 1445 aa12.62□□□□□ -0.39
RPA1-205ENST00000573924 PLB1Q6P1J6 1458 aa12.59□□□□□ -0.39
RPA1-205ENST00000573924 IGF1RP08069 1367 aa12.59□□□□□ -0.39
RPA1-205ENST00000573924 TNIKQ9UKE5 1360 aa12.58□□□□□ -0.4
RPA1-205ENST00000573924 KDM4FA0A1W2PPD8 638 aa12.57□□□□□ -0.4
RPA1-205ENST00000573924 RNF216Q9NWF9 866 aaPredicted RBP12.57□□□□□ -0.4
RPA1-205ENST00000573924 TSPOAP1O95153 1857 aa12.57□□□□□ -0.4
RPA1-205ENST00000573924 ABCC2Q92887 1545 aa12.57□□□□□ -0.4
RPA1-205ENST00000573924 CARMIL1Q5VZK9 1371 aa12.55□□□□□ -0.4
RPA1-205ENST00000573924 TEX14Q8IWB6 1497 aa12.53□□□□□ -0.4
RPA1-205ENST00000573924 GLI2P10070 1586 aa12.53□□□□□ -0.4
RPA1-205ENST00000573924 TTBK1Q5TCY1 1321 aaPredicted RBP12.53□□□□□ -0.4
RPA1-205ENST00000573924 ASXL2Q76L83 1435 aa12.53□□□□□ -0.4
RPA1-205ENST00000573924 UHRF1BP1LA0JNW5 1464 aa12.53□□□□□ -0.4
RPA1-205ENST00000573924 FAM9AQ8IZU1 332 aaPredicted RBP12.52□□□□□ -0.41
RPA1-205ENST00000573924 UACAQ9BZF9 1416 aa12.51□□□□□ -0.41
RPA1-205ENST00000573924 IQGAP2Q13576 1575 aa12.51□□□□□ -0.41
RPA1-205ENST00000573924 ADGRL1O94910 1474 aa12.46□□□□□ -0.41
RPA1-205ENST00000573924 ILDR1Q86SU0 546 aaPredicted RBP12.45□□□□□ -0.42
RPA1-205ENST00000573924 KDM5BQ9UGL1 1544 aa12.44□□□□□ -0.42
RPA1-205ENST00000573924 EPRSP07814 1512 aaKnown RBP12.43□□□□□ -0.42
RPA1-205ENST00000573924 MAPK8IP2Q13387 824 aaPredicted RBP12.43□□□□□ -0.42
RPA1-205ENST00000573924 RAPGEF2Q9Y4G8 1499 aa12.42□□□□□ -0.42
RPA1-205ENST00000573924 MAP3K4Q9Y6R4 1608 aa12.42□□□□□ -0.42
RPA1-205ENST00000573924 UGGT2Q9NYU1 1516 aa12.41□□□□□ -0.42
RPA1-205ENST00000573924 GOLGA3Q08378 1498 aa12.4□□□□□ -0.42
RPA1-205ENST00000573924 PPRC1Q5VV67 1664 aaKnown RBP12.4□□□□□ -0.42
RPA1-205ENST00000573924 DISP1Q96F81 1524 aa12.4□□□□□ -0.42
RPA1-205ENST00000573924 WDR7Q9Y4E6 1490 aa12.39□□□□□ -0.43
RPA1-205ENST00000573924 ZCCHC11Q5TAX3 1644 aaKnown RBP12.37□□□□□ -0.43
RPA1-205ENST00000573924 KIAA0556O60303 1618 aa12.37□□□□□ -0.43
RPA1-205ENST00000573924 CD109Q6YHK3 1445 aa12.36□□□□□ -0.43
RPA1-205ENST00000573924 HECW2Q9P2P5 1572 aa12.35□□□□□ -0.43
RPA1-205ENST00000573924 MAGI3Q5TCQ9 1506 aa12.34□□□□□ -0.43
RPA1-205ENST00000573924 COL17A1Q9UMD9 1497 aaPredicted RBP12.34□□□□□ -0.43
RPA1-205ENST00000573924 CFAP43Q8NDM7 1665 aa12.33□□□□□ -0.44
RPA1-205ENST00000573924 PHLDB1Q86UU1 1377 aa12.32□□□□□ -0.44
RPA1-205ENST00000573924 HOXD11P31277 338 aaPredicted RBP12.32□□□□□ -0.44
RPA1-205ENST00000573924 KCNH8Q96L42 1107 aa12.32□□□□□ -0.44
RPA1-205ENST00000573924 DMRT2Q9Y5R5 561 aa12.29□□□□□ -0.44
RPA1-205ENST00000573924 CTTNBP2Q8WZ74 1663 aa12.29□□□□□ -0.44
RPA1-205ENST00000573924 ARAP3Q8WWN8 1544 aa12.26□□□□□ -0.45
RPA1-205ENST00000573924 FBXO41Q8TF61 875 aa12.25□□□□□ -0.45
RPA1-205ENST00000573924 ABCA8O94911 1581 aa12.25□□□□□ -0.45
RPA1-205ENST00000573924 ATXN8OSP0DMR3 200 aa12.23□□□□□ -0.45
RPA1-205ENST00000573924 KIF21BO75037 1637 aa12.2□□□□□ -0.46
RPA1-205ENST00000573924 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.2□□□□□ -0.46
RPA1-205ENST00000573924 HNRNPUL2Q1KMD3 747 aaKnown RBP12.2□□□□□ -0.46
RPA1-205ENST00000573924 AMER1Q5JTC6 1135 aaPredicted RBP12.2□□□□□ -0.46
RPA1-205ENST00000573924 NEO1Q92859 1461 aa12.2□□□□□ -0.46
RPA1-205ENST00000573924 ARID4BQ4LE39 1312 aaPredicted RBP12.19□□□□□ -0.46
RPA1-205ENST00000573924 PRXQ9BXM0 1461 aa12.18□□□□□ -0.46
RPA1-205ENST00000573924 PTPRMP28827 1452 aa12.17□□□□□ -0.46
RPA1-205ENST00000573924 ABCA9Q8IUA7 1624 aa12.17□□□□□ -0.46
RPA1-205ENST00000573924 POGZQ7Z3K3 1410 aa12.16□□□□□ -0.46
RPA1-205ENST00000573924 ATP10BO94823 1461 aa12.15□□□□□ -0.46
RPA1-205ENST00000573924 MYCNP04198 464 aaPredicted RBP12.15□□□□□ -0.46
RPA1-205ENST00000573924 SLC4A2P04920 1241 aa12.14□□□□□ -0.47
RPA1-205ENST00000573924 ADAMTSL3P82987 1691 aa12.13□□□□□ -0.47
RPA1-205ENST00000573924 PLEKHD1A6NEE1 506 aa12.13□□□□□ -0.47
RPA1-205ENST00000573924 ARID3CA6NKF2 412 aa12.13□□□□□ -0.47
RPA1-205ENST00000573924 RAPGEF3O95398 923 aa12.13□□□□□ -0.47
RPA1-205ENST00000573924 P3H3Q8IVL6 736 aa12.13□□□□□ -0.47
RPA1-205ENST00000573924 RAPGEF6Q8TEU7 1601 aa12.11□□□□□ -0.47
RPA1-205ENST00000573924 PCF11O94913 1555 aaKnown RBP12.1□□□□□ -0.47
RPA1-205ENST00000573924 CFAP74Q9C0B2 1584 aa12.1□□□□□ -0.47
RPA1-205ENST00000573924 DENND4BO75064 1496 aaPredicted RBP12.1□□□□□ -0.47
RPA1-205ENST00000573924 BCORL1Q5H9F3 1711 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms