RNA–Protein interactions for RNA: ENST00000572405.5

TOM1L1-213, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-213ENST00000572405 CTTNBP2Q8WZ74 1663 aa18.79■□□□□ 0.6
TOM1L1-213ENST00000572405 TTBK1Q5TCY1 1321 aaPredicted RBP18.78■□□□□ 0.6
TOM1L1-213ENST00000572405 FHAD1B1AJZ9 1412 aa18.77■□□□□ 0.59
TOM1L1-213ENST00000572405 SNAPC4Q5SXM2 1469 aa18.73■□□□□ 0.59
TOM1L1-213ENST00000572405 P3H3Q8IVL6 736 aa18.66■□□□□ 0.58
TOM1L1-213ENST00000572405 EFCAB5A4FU69 1503 aa18.66■□□□□ 0.58
TOM1L1-213ENST00000572405 APLP2Q06481 763 aa18.65■□□□□ 0.58
TOM1L1-213ENST00000572405 FHOD3Q2V2M9 1422 aa18.64■□□□□ 0.57
TOM1L1-213ENST00000572405 MAGI1Q96QZ7 1491 aaPredicted RBP18.64■□□□□ 0.57
TOM1L1-213ENST00000572405 GRIN2AQ12879 1464 aa18.62■□□□□ 0.57
TOM1L1-213ENST00000572405 IQGAP2Q13576 1575 aa18.6■□□□□ 0.57
TOM1L1-213ENST00000572405 SAMD9Q5K651 1589 aa18.6■□□□□ 0.57
TOM1L1-213ENST00000572405 SYNJ2O15056 1496 aa18.58■□□□□ 0.57
TOM1L1-213ENST00000572405 PCF11O94913 1555 aaKnown RBP18.57■□□□□ 0.56
TOM1L1-213ENST00000572405 CHMP7Q8WUX9 453 aaPredicted RBP18.54■□□□□ 0.56
TOM1L1-213ENST00000572405 FBLN2P98095 1184 aa18.53■□□□□ 0.56
TOM1L1-213ENST00000572405 KANK4Q5T7N3 995 aaPredicted RBP18.52■□□□□ 0.56
TOM1L1-213ENST00000572405 KIAA0586Q9BVV6 1533 aa18.51■□□□□ 0.55
TOM1L1-213ENST00000572405 CEP170Q5SW79 1584 aa18.51■□□□□ 0.55
TOM1L1-213ENST00000572405 FMN1Q68DA7 1419 aa18.49■□□□□ 0.55
TOM1L1-213ENST00000572405 TIAM1Q13009 1591 aa18.49■□□□□ 0.55
TOM1L1-213ENST00000572405 FYCO1Q9BQS8 1478 aa18.49■□□□□ 0.55
TOM1L1-213ENST00000572405 UGGT2Q9NYU1 1516 aa18.48■□□□□ 0.55
TOM1L1-213ENST00000572405 CASKIN1Q8WXD9 1431 aa18.47■□□□□ 0.55
TOM1L1-213ENST00000572405 ATP1B4Q9UN42 357 aaPredicted RBP18.46■□□□□ 0.55
TOM1L1-213ENST00000572405 MAP3K1Q13233 1512 aa18.45■□□□□ 0.54
TOM1L1-213ENST00000572405 NUP160Q12769 1436 aa18.45■□□□□ 0.54
TOM1L1-213ENST00000572405 CFAP43Q8NDM7 1665 aa18.45■□□□□ 0.54
TOM1L1-213ENST00000572405 HRCP23327 699 aa18.43■□□□□ 0.54
TOM1L1-213ENST00000572405 DISP1Q96F81 1524 aa18.42■□□□□ 0.54
TOM1L1-213ENST00000572405 KIAA0556O60303 1618 aa18.42■□□□□ 0.54
TOM1L1-213ENST00000572405 LRRC9Q6ZRR7 1453 aa18.4■□□□□ 0.54
TOM1L1-213ENST00000572405 CHD1O14646 1710 aa18.39■□□□□ 0.54
TOM1L1-213ENST00000572405 LRRIQ1Q96JM4 1722 aa18.38■□□□□ 0.53
TOM1L1-213ENST00000572405 HECW1Q76N89 1606 aa18.32■□□□□ 0.52
TOM1L1-213ENST00000572405 JPH4Q96JJ6 628 aa18.32■□□□□ 0.52
TOM1L1-213ENST00000572405 HNRNPUL2Q1KMD3 747 aaKnown RBP18.29■□□□□ 0.52
TOM1L1-213ENST00000572405 RRBP1Q9P2E9 1410 aaKnown RBP18.29■□□□□ 0.52
TOM1L1-213ENST00000572405 CARMIL2Q6F5E8 1435 aa18.27■□□□□ 0.52
TOM1L1-213ENST00000572405 PHLDB1Q86UU1 1377 aa18.27■□□□□ 0.52
TOM1L1-213ENST00000572405 CCDC18Q5T9S5 1454 aa18.26■□□□□ 0.51
TOM1L1-213ENST00000572405 MTUS2Q5JR59 1369 aa18.26■□□□□ 0.51
TOM1L1-213ENST00000572405 EPRSP07814 1512 aaKnown RBP18.25■□□□□ 0.51
TOM1L1-213ENST00000572405 CDK13Q14004 1512 aaKnown RBP18.25■□□□□ 0.51
TOM1L1-213ENST00000572405 CCNB3Q8WWL7 1395 aa18.25■□□□□ 0.51
TOM1L1-213ENST00000572405 ARID3CA6NKF2 412 aa18.24■□□□□ 0.51
TOM1L1-213ENST00000572405 RAPGEF6Q8TEU7 1601 aa18.24■□□□□ 0.51
TOM1L1-213ENST00000572405 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.23■□□□□ 0.51
TOM1L1-213ENST00000572405 MAGI3Q5TCQ9 1506 aa18.23■□□□□ 0.51
TOM1L1-213ENST00000572405 PRG4Q92954 1404 aaPredicted RBP18.21■□□□□ 0.51
TOM1L1-213ENST00000572405 NUP153P49790 1475 aaKnown RBP18.21■□□□□ 0.51
TOM1L1-213ENST00000572405 EHBP1L1Q8N3D4 1523 aa18.21■□□□□ 0.51
TOM1L1-213ENST00000572405 PLB1Q6P1J6 1458 aa18.21■□□□□ 0.51
TOM1L1-213ENST00000572405 SHROOM2Q13796 1616 aa18.18■□□□□ 0.5
TOM1L1-213ENST00000572405 NCOA2Q15596 1464 aa18.16■□□□□ 0.5
TOM1L1-213ENST00000572405 SUPT6HQ7KZ85 1726 aaKnown RBP18.16■□□□□ 0.5
TOM1L1-213ENST00000572405 CLASP1Q7Z460 1538 aa18.15■□□□□ 0.5
TOM1L1-213ENST00000572405 CCER1Q8TC90 406 aaPredicted RBP18.14■□□□□ 0.49
TOM1L1-213ENST00000572405 ERCC6L2Q5T890 1561 aa18.13■□□□□ 0.49
TOM1L1-213ENST00000572405 ITGAEP38570 1179 aa18.12■□□□□ 0.49
TOM1L1-213ENST00000572405 ABCA8O94911 1581 aa18.12■□□□□ 0.49
TOM1L1-213ENST00000572405 FAM50AQ14320 339 aaKnown RBP18.11■□□□□ 0.49
TOM1L1-213ENST00000572405 FGD6Q6ZV73 1430 aa18.11■□□□□ 0.49
TOM1L1-213ENST00000572405 ARHGEF11O15085 1522 aa18.11■□□□□ 0.49
TOM1L1-213ENST00000572405 PTPRGP23470 1445 aa18.1■□□□□ 0.49
TOM1L1-213ENST00000572405 MYOM3Q5VTT5 1437 aa18.09■□□□□ 0.49
TOM1L1-213ENST00000572405 ZEB1P37275 1124 aaPredicted RBP18.09■□□□□ 0.49
TOM1L1-213ENST00000572405 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.02■□□□□ 0.48
TOM1L1-213ENST00000572405 CDK11AQ9UQ88 783 aaPredicted RBP18.02■□□□□ 0.48
TOM1L1-213ENST00000572405 TROQ12816 1431 aaPredicted RBP18.02■□□□□ 0.47
TOM1L1-213ENST00000572405 ATP10BO94823 1461 aa18.01■□□□□ 0.47
TOM1L1-213ENST00000572405 PTPN23Q9H3S7 1636 aa18.01■□□□□ 0.47
TOM1L1-213ENST00000572405 UACAQ9BZF9 1416 aa17.99■□□□□ 0.47
TOM1L1-213ENST00000572405 KIF14Q15058 1648 aa17.98■□□□□ 0.47
TOM1L1-213ENST00000572405 ADCY10Q96PN6 1610 aa17.96■□□□□ 0.46
TOM1L1-213ENST00000572405 TCOF1Q13428 1488 aaKnown RBP17.95■□□□□ 0.46
TOM1L1-213ENST00000572405 ABCC2Q92887 1545 aa17.95■□□□□ 0.46
TOM1L1-213ENST00000572405 MIA2Q96PC5 1412 aa17.94■□□□□ 0.46
TOM1L1-213ENST00000572405 RAB3GAP2Q9H2M9 1393 aa17.93■□□□□ 0.46
TOM1L1-213ENST00000572405 PTPRKQ15262 1439 aa17.93■□□□□ 0.46
TOM1L1-213ENST00000572405 PLEKHD1A6NEE1 506 aa17.92■□□□□ 0.46
TOM1L1-213ENST00000572405 SETD5Q9C0A6 1442 aa17.91■□□□□ 0.46
TOM1L1-213ENST00000572405 OSCARQ8IYS5 282 aa17.9■□□□□ 0.46
TOM1L1-213ENST00000572405 DHX57Q6P158 1386 aaKnown RBP17.9■□□□□ 0.46
TOM1L1-213ENST00000572405 ITSN2Q9NZM3 1697 aa17.88■□□□□ 0.45
TOM1L1-213ENST00000572405 GPATCH8Q9UKJ3 1502 aaKnown RBP17.87■□□□□ 0.45
TOM1L1-213ENST00000572405 ABCC10Q5T3U5 1492 aa17.86■□□□□ 0.45
TOM1L1-213ENST00000572405 ZNF644Q9H582 1327 aaPredicted RBP17.86■□□□□ 0.45
TOM1L1-213ENST00000572405 UHRF1BP1LA0JNW5 1464 aa17.85■□□□□ 0.45
TOM1L1-213ENST00000572405 ZCCHC11Q5TAX3 1644 aaKnown RBP17.84■□□□□ 0.45
TOM1L1-213ENST00000572405 CDC42BPAQ5VT25 1732 aa17.84■□□□□ 0.45
TOM1L1-213ENST00000572405 CFDP1Q9UEE9 299 aaPredicted RBP17.83■□□□□ 0.45
TOM1L1-213ENST00000572405 HFM1A2PYH4 1435 aa17.83■□□□□ 0.44
TOM1L1-213ENST00000572405 CAMSAP2Q08AD1 1489 aa17.83■□□□□ 0.44
TOM1L1-213ENST00000572405 CHIC2Q9UKJ5 165 aa17.81■□□□□ 0.44
TOM1L1-213ENST00000572405 KDM5BQ9UGL1 1544 aa17.81■□□□□ 0.44
TOM1L1-213ENST00000572405 DNMT1P26358 1616 aaKnown RBP17.8■□□□□ 0.44
TOM1L1-213ENST00000572405 DAPK1P53355 1430 aa17.8■□□□□ 0.44
TOM1L1-213ENST00000572405 NAIPQ13075 1403 aa17.8■□□□□ 0.44
TOM1L1-213ENST00000572405 ZNF777Q9ULD5 760 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms