RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 FAM69CQ0P6D2 419 aa37.41■■■■□ 3.58
UBFD1-210ENST00000571064 ABCC10Q5T3U5 1492 aa37.36■■■■□ 3.57
UBFD1-210ENST00000571064 NPM1P06748 294 aaKnown RBP eCLIP37.31■■■■□ 3.56
UBFD1-210ENST00000571064 RUSC2Q8N2Y8 1516 aa37.31■■■■□ 3.56
UBFD1-210ENST00000571064 MAPKBP1O60336 1514 aa37.26■■■■□ 3.55
UBFD1-210ENST00000571064 DIP2BQ9P265 1576 aa37.23■■■■□ 3.55
UBFD1-210ENST00000571064 ADCY10Q96PN6 1610 aa37.21■■■■□ 3.55
UBFD1-210ENST00000571064 KDM4FA0A1W2PPD8 638 aa37.13■■■■□ 3.53
UBFD1-210ENST00000571064 KDM6BO15054 1643 aa37.1■■■■□ 3.53
UBFD1-210ENST00000571064 KIAA0586Q9BVV6 1533 aa37.05■■■■□ 3.52
UBFD1-210ENST00000571064 TSPOAP1O95153 1857 aa37.03■■■■□ 3.52
UBFD1-210ENST00000571064 IGF1RP08069 1367 aa36.97■■■■□ 3.51
UBFD1-210ENST00000571064 TTBK1Q5TCY1 1321 aaPredicted RBP36.89■■■■□ 3.5
UBFD1-210ENST00000571064 PTPRGP23470 1445 aa36.87■■■■□ 3.49
UBFD1-210ENST00000571064 KIF27Q86VH2 1401 aa36.85■■■■□ 3.49
UBFD1-210ENST00000571064 CUL7Q14999 1698 aa36.85■■■■□ 3.49
UBFD1-210ENST00000571064 ABCC2Q92887 1545 aa36.75■■■■□ 3.47
UBFD1-210ENST00000571064 TNIKQ9UKE5 1360 aa36.74■■■■□ 3.47
UBFD1-210ENST00000571064 ILDR1Q86SU0 546 aaPredicted RBP36.73■■■■□ 3.47
UBFD1-210ENST00000571064 ASXL2Q76L83 1435 aa36.73■■■■□ 3.47
UBFD1-210ENST00000571064 CARMIL2Q6F5E8 1435 aa36.7■■■■□ 3.47
UBFD1-210ENST00000571064 CARMIL1Q5VZK9 1371 aa36.7■■■■□ 3.47
UBFD1-210ENST00000571064 PPRC1Q5VV67 1664 aaKnown RBP36.69■■■■□ 3.46
UBFD1-210ENST00000571064 PLB1Q6P1J6 1458 aa36.67■■■■□ 3.46
UBFD1-210ENST00000571064 GLI2P10070 1586 aa36.66■■■■□ 3.46
UBFD1-210ENST00000571064 ADGRL1O94910 1474 aa36.61■■■■□ 3.45
UBFD1-210ENST00000571064 IQGAP2Q13576 1575 aa36.58■■■■□ 3.45
UBFD1-210ENST00000571064 UHRF1BP1LA0JNW5 1464 aa36.58■■■■□ 3.45
UBFD1-210ENST00000571064 UACAQ9BZF9 1416 aa36.56■■■■□ 3.44
UBFD1-210ENST00000571064 COL17A1Q9UMD9 1497 aaPredicted RBP36.56■■■■□ 3.44
UBFD1-210ENST00000571064 DISP1Q96F81 1524 aa36.5■■■■□ 3.43
UBFD1-210ENST00000571064 EPRSP07814 1512 aaKnown RBP36.49■■■■□ 3.43
UBFD1-210ENST00000571064 KDM5BQ9UGL1 1544 aa36.44■■■■□ 3.42
UBFD1-210ENST00000571064 MAP3K4Q9Y6R4 1608 aa36.44■■■■□ 3.42
UBFD1-210ENST00000571064 TEX14Q8IWB6 1497 aa36.37■■■■□ 3.41
UBFD1-210ENST00000571064 ZCCHC11Q5TAX3 1644 aaKnown RBP36.37■■■■□ 3.41
UBFD1-210ENST00000571064 CHIC1Q5VXU3 224 aa36.34■■■■□ 3.41
UBFD1-210ENST00000571064 HECW2Q9P2P5 1572 aa36.33■■■■□ 3.41
UBFD1-210ENST00000571064 UGGT2Q9NYU1 1516 aa36.33■■■■□ 3.41
UBFD1-210ENST00000571064 KIAA0556O60303 1618 aa36.26■■■■□ 3.4
UBFD1-210ENST00000571064 RAPGEF2Q9Y4G8 1499 aa36.26■■■■□ 3.4
UBFD1-210ENST00000571064 WDR7Q9Y4E6 1490 aa36.23■■■■□ 3.39
UBFD1-210ENST00000571064 CD109Q6YHK3 1445 aa36.1■■■■□ 3.37
UBFD1-210ENST00000571064 KCNH8Q96L42 1107 aa36.1■■■■□ 3.37
UBFD1-210ENST00000571064 MAGI3Q5TCQ9 1506 aa36.07■■■■□ 3.36
UBFD1-210ENST00000571064 CFAP43Q8NDM7 1665 aa36.03■■■■□ 3.36
UBFD1-210ENST00000571064 ABCA8O94911 1581 aa35.99■■■■□ 3.35
UBFD1-210ENST00000571064 CTTNBP2Q8WZ74 1663 aa35.97■■■■□ 3.35
UBFD1-210ENST00000571064 GOLGA3Q08378 1498 aa35.95■■■■□ 3.35
UBFD1-210ENST00000571064 KIF21BO75037 1637 aa35.93■■■■□ 3.34
UBFD1-210ENST00000571064 ARID3CA6NKF2 412 aa35.83■■■■□ 3.33
UBFD1-210ENST00000571064 ARAP3Q8WWN8 1544 aa35.82■■■■□ 3.32
UBFD1-210ENST00000571064 FBXO41Q8TF61 875 aa35.75■■■■□ 3.31
UBFD1-210ENST00000571064 ATP10BO94823 1461 aa35.73■■■■□ 3.31
UBFD1-210ENST00000571064 PRXQ9BXM0 1461 aa35.72■■■■□ 3.31
UBFD1-210ENST00000571064 P3H3Q8IVL6 736 aa35.71■■■■□ 3.31
UBFD1-210ENST00000571064 PTPRMP28827 1452 aa35.7■■■■□ 3.31
UBFD1-210ENST00000571064 EEA1Q15075 1411 aa35.69■■■■□ 3.3
UBFD1-210ENST00000571064 RAPGEF3O95398 923 aa35.67■■■■□ 3.3
UBFD1-210ENST00000571064 ADAMTSL3P82987 1691 aa35.66■■■■□ 3.3
UBFD1-210ENST00000571064 FAM9AQ8IZU1 332 aaPredicted RBP35.66■■■■□ 3.3
UBFD1-210ENST00000571064 ABCA9Q8IUA7 1624 aa35.64■■■■□ 3.3
UBFD1-210ENST00000571064 PHLDB1Q86UU1 1377 aa35.64■■■■□ 3.3
UBFD1-210ENST00000571064 CSRNP3Q8WYN3 585 aa35.63■■■■□ 3.29
UBFD1-210ENST00000571064 NEO1Q92859 1461 aa35.53■■■■□ 3.28
UBFD1-210ENST00000571064 ARID4BQ4LE39 1312 aaPredicted RBP35.53■■■■□ 3.28
UBFD1-210ENST00000571064 BCORL1Q5H9F3 1711 aa35.51■■■■□ 3.27
UBFD1-210ENST00000571064 FRMPD1Q5SYB0 1578 aa35.5■■■■□ 3.27
UBFD1-210ENST00000571064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.49■■■■□ 3.27
UBFD1-210ENST00000571064 HNRNPUL2Q1KMD3 747 aaKnown RBP35.49■■■■□ 3.27
UBFD1-210ENST00000571064 MADDQ8WXG6 1647 aa35.49■■■■□ 3.27
UBFD1-210ENST00000571064 PCF11O94913 1555 aaKnown RBP35.47■■■■□ 3.27
UBFD1-210ENST00000571064 RAPGEF6Q8TEU7 1601 aa35.46■■■■□ 3.27
UBFD1-210ENST00000571064 SAMD9Q5K651 1589 aa35.43■■■■□ 3.26
UBFD1-210ENST00000571064 LMTK3Q96Q04 1460 aa35.43■■■■□ 3.26
UBFD1-210ENST00000571064 NUP153P49790 1475 aaKnown RBP35.36■■■■□ 3.25
UBFD1-210ENST00000571064 RIMS1Q86UR5 1692 aaKnown RBP35.33■■■■□ 3.25
UBFD1-210ENST00000571064 ARHGEF40Q8TER5 1519 aa35.32■■■■□ 3.25
UBFD1-210ENST00000571064 DENND4BO75064 1496 aaPredicted RBP35.3■■■■□ 3.24
UBFD1-210ENST00000571064 HSPA2P54652 639 aa35.3■■■■□ 3.24
UBFD1-210ENST00000571064 RANGAP1P46060 587 aaPredicted RBP35.29■■■■□ 3.24
UBFD1-210ENST00000571064 PLPPR3Q6T4P5 718 aa35.29■■■■□ 3.24
UBFD1-210ENST00000571064 RICTORQ6R327 1708 aa35.27■■■■□ 3.24
UBFD1-210ENST00000571064 AKNAQ7Z591 1439 aa35.26■■■■□ 3.24
UBFD1-210ENST00000571064 PLEKHD1A6NEE1 506 aa35.24■■■■□ 3.23
UBFD1-210ENST00000571064 FHOD3Q2V2M9 1422 aa35.23■■■■□ 3.23
UBFD1-210ENST00000571064 FANCAO15360 1455 aa35.22■■■■□ 3.23
UBFD1-210ENST00000571064 EHMT2Q96KQ7 1210 aa35.17■■■■□ 3.22
UBFD1-210ENST00000571064 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.16■■■■□ 3.22
UBFD1-210ENST00000571064 YEATS2Q9ULM3 1422 aa35.16■■■■□ 3.22
UBFD1-210ENST00000571064 SIGLEC1Q9BZZ2 1709 aa35.16■■■■□ 3.22
UBFD1-210ENST00000571064 POGZQ7Z3K3 1410 aa35.15■■■■□ 3.22
UBFD1-210ENST00000571064 CFAP74Q9C0B2 1584 aa35.13■■■■□ 3.21
UBFD1-210ENST00000571064 ZMYM4Q5VZL5 1548 aa35.13■■■■□ 3.21
UBFD1-210ENST00000571064 ZFYVE16Q7Z3T8 1539 aa35.12■■■■□ 3.21
UBFD1-210ENST00000571064 MLECQ14165 292 aa35.12■■■■□ 3.21
UBFD1-210ENST00000571064 TTC37Q6PGP7 1564 aa35.11■■■■□ 3.21
UBFD1-210ENST00000571064 EFCAB5A4FU69 1503 aa35.08■■■■□ 3.21
UBFD1-210ENST00000571064 CERKQ8TCT0 537 aa35.08■■■■□ 3.21
UBFD1-210ENST00000571064 MAGI2Q86UL8 1455 aa35.03■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms