RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 ABCC10Q5T3U5 1492 aa23.25■■□□□ 1.31
CCDC40-205ENST00000571028 TOP2BQ02880 1626 aa23.23■■□□□ 1.31
CCDC40-205ENST00000571028 BIVM-ERCC5R4GMW8 1640 aa23.22■■□□□ 1.31
CCDC40-205ENST00000571028 MAPKBP1O60336 1514 aa23.18■■□□□ 1.3
CCDC40-205ENST00000571028 DIP2BQ9P265 1576 aa23.14■■□□□ 1.3
CCDC40-205ENST00000571028 KDM6BO15054 1643 aa23.14■■□□□ 1.29
CCDC40-205ENST00000571028 RUSC2Q8N2Y8 1516 aa23.13■■□□□ 1.29
CCDC40-205ENST00000571028 KDM4FA0A1W2PPD8 638 aa23.1■■□□□ 1.29
CCDC40-205ENST00000571028 ADCY10Q96PN6 1610 aa23.08■■□□□ 1.28
CCDC40-205ENST00000571028 ILDR1Q86SU0 546 aaPredicted RBP23.01■■□□□ 1.27
CCDC40-205ENST00000571028 KIAA0586Q9BVV6 1533 aa22.98■■□□□ 1.27
CCDC40-205ENST00000571028 TSPOAP1O95153 1857 aa22.97■■□□□ 1.27
CCDC40-205ENST00000571028 TTBK1Q5TCY1 1321 aaPredicted RBP22.95■■□□□ 1.26
CCDC40-205ENST00000571028 PTPRGP23470 1445 aa22.92■■□□□ 1.26
CCDC40-205ENST00000571028 CARMIL2Q6F5E8 1435 aa22.85■■□□□ 1.25
CCDC40-205ENST00000571028 KIF27Q86VH2 1401 aa22.85■■□□□ 1.25
CCDC40-205ENST00000571028 IGF1RP08069 1367 aa22.85■■□□□ 1.25
CCDC40-205ENST00000571028 CUL7Q14999 1698 aa22.84■■□□□ 1.25
CCDC40-205ENST00000571028 ABCC2Q92887 1545 aa22.84■■□□□ 1.25
CCDC40-205ENST00000571028 ADGRL1O94910 1474 aa22.84■■□□□ 1.25
CCDC40-205ENST00000571028 PLB1Q6P1J6 1458 aa22.84■■□□□ 1.25
CCDC40-205ENST00000571028 ASXL2Q76L83 1435 aa22.82■■□□□ 1.24
CCDC40-205ENST00000571028 TNIKQ9UKE5 1360 aa22.82■■□□□ 1.24
CCDC40-205ENST00000571028 GLI2P10070 1586 aa22.77■■□□□ 1.24
CCDC40-205ENST00000571028 CARMIL1Q5VZK9 1371 aa22.73■■□□□ 1.23
CCDC40-205ENST00000571028 UACAQ9BZF9 1416 aa22.71■■□□□ 1.23
CCDC40-205ENST00000571028 UHRF1BP1LA0JNW5 1464 aa22.71■■□□□ 1.23
CCDC40-205ENST00000571028 TEX14Q8IWB6 1497 aa22.71■■□□□ 1.23
CCDC40-205ENST00000571028 PPRC1Q5VV67 1664 aaKnown RBP22.71■■□□□ 1.23
CCDC40-205ENST00000571028 IQGAP2Q13576 1575 aa22.68■■□□□ 1.22
CCDC40-205ENST00000571028 HECW2Q9P2P5 1572 aa22.68■■□□□ 1.22
CCDC40-205ENST00000571028 EPRSP07814 1512 aaKnown RBP22.66■■□□□ 1.22
CCDC40-205ENST00000571028 COL17A1Q9UMD9 1497 aaPredicted RBP22.65■■□□□ 1.22
CCDC40-205ENST00000571028 MAP3K4Q9Y6R4 1608 aa22.61■■□□□ 1.21
CCDC40-205ENST00000571028 KDM5BQ9UGL1 1544 aa22.61■■□□□ 1.21
CCDC40-205ENST00000571028 DISP1Q96F81 1524 aa22.58■■□□□ 1.21
CCDC40-205ENST00000571028 ZCCHC11Q5TAX3 1644 aaKnown RBP22.55■■□□□ 1.2
CCDC40-205ENST00000571028 WDR7Q9Y4E6 1490 aa22.53■■□□□ 1.2
CCDC40-205ENST00000571028 UGGT2Q9NYU1 1516 aa22.5■■□□□ 1.19
CCDC40-205ENST00000571028 KIAA0556O60303 1618 aa22.47■■□□□ 1.19
CCDC40-205ENST00000571028 CD109Q6YHK3 1445 aa22.46■■□□□ 1.19
CCDC40-205ENST00000571028 RAPGEF2Q9Y4G8 1499 aa22.46■■□□□ 1.19
CCDC40-205ENST00000571028 KCNH8Q96L42 1107 aa22.44■■□□□ 1.18
CCDC40-205ENST00000571028 FBXO41Q8TF61 875 aa22.42■■□□□ 1.18
CCDC40-205ENST00000571028 MAGI3Q5TCQ9 1506 aa22.41■■□□□ 1.18
CCDC40-205ENST00000571028 CFAP43Q8NDM7 1665 aa22.37■■□□□ 1.17
CCDC40-205ENST00000571028 GOLGA3Q08378 1498 aa22.34■■□□□ 1.17
CCDC40-205ENST00000571028 KIF21BO75037 1637 aa22.33■■□□□ 1.17
CCDC40-205ENST00000571028 CHIC1Q5VXU3 224 aa22.33■■□□□ 1.17
CCDC40-205ENST00000571028 FAM9AQ8IZU1 332 aaPredicted RBP22.31■■□□□ 1.16
CCDC40-205ENST00000571028 ABCA8O94911 1581 aa22.28■■□□□ 1.16
CCDC40-205ENST00000571028 ARAP3Q8WWN8 1544 aa22.26■■□□□ 1.15
CCDC40-205ENST00000571028 CTTNBP2Q8WZ74 1663 aa22.23■■□□□ 1.15
CCDC40-205ENST00000571028 PTPRMP28827 1452 aa22.23■■□□□ 1.15
CCDC40-205ENST00000571028 ARID3CA6NKF2 412 aa22.23■■□□□ 1.15
CCDC40-205ENST00000571028 ARID4BQ4LE39 1312 aaPredicted RBP22.2■■□□□ 1.14
CCDC40-205ENST00000571028 PHLDB1Q86UU1 1377 aa22.2■■□□□ 1.14
CCDC40-205ENST00000571028 RAPGEF3O95398 923 aa22.15■■□□□ 1.14
CCDC40-205ENST00000571028 ADAMTSL3P82987 1691 aa22.14■■□□□ 1.14
CCDC40-205ENST00000571028 PCF11O94913 1555 aaKnown RBP22.12■■□□□ 1.13
CCDC40-205ENST00000571028 ATP10BO94823 1461 aa22.11■■□□□ 1.13
CCDC40-205ENST00000571028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.11■■□□□ 1.13
CCDC40-205ENST00000571028 HNRNPUL2Q1KMD3 747 aaKnown RBP22.11■■□□□ 1.13
CCDC40-205ENST00000571028 P3H3Q8IVL6 736 aa22.1■■□□□ 1.13
CCDC40-205ENST00000571028 ABCA9Q8IUA7 1624 aa22.09■■□□□ 1.13
CCDC40-205ENST00000571028 NEO1Q92859 1461 aa22.09■■□□□ 1.13
CCDC40-205ENST00000571028 LMTK3Q96Q04 1460 aa22.07■■□□□ 1.12
CCDC40-205ENST00000571028 MADDQ8WXG6 1647 aa22.06■■□□□ 1.12
CCDC40-205ENST00000571028 BCORL1Q5H9F3 1711 aa22.06■■□□□ 1.12
CCDC40-205ENST00000571028 PRXQ9BXM0 1461 aa22.03■■□□□ 1.12
CCDC40-205ENST00000571028 PLPPR3Q6T4P5 718 aa22.02■■□□□ 1.12
CCDC40-205ENST00000571028 FRMPD1Q5SYB0 1578 aa21.99■■□□□ 1.11
CCDC40-205ENST00000571028 ARHGEF40Q8TER5 1519 aa21.98■■□□□ 1.11
CCDC40-205ENST00000571028 HSPA2P54652 639 aa21.98■■□□□ 1.11
CCDC40-205ENST00000571028 RIMS1Q86UR5 1692 aaKnown RBP21.98■■□□□ 1.11
CCDC40-205ENST00000571028 POGZQ7Z3K3 1410 aa21.97■■□□□ 1.11
CCDC40-205ENST00000571028 DENND4BO75064 1496 aaPredicted RBP21.96■■□□□ 1.11
CCDC40-205ENST00000571028 CSRNP3Q8WYN3 585 aa21.96■■□□□ 1.11
CCDC40-205ENST00000571028 RAPGEF6Q8TEU7 1601 aa21.95■■□□□ 1.1
CCDC40-205ENST00000571028 FANCAO15360 1455 aa21.94■■□□□ 1.1
CCDC40-205ENST00000571028 AKNAQ7Z591 1439 aa21.93■■□□□ 1.1
CCDC40-205ENST00000571028 CERKQ8TCT0 537 aa21.92■■□□□ 1.1
CCDC40-205ENST00000571028 EHMT2Q96KQ7 1210 aa21.91■■□□□ 1.1
CCDC40-205ENST00000571028 EEA1Q15075 1411 aa21.9■■□□□ 1.1
CCDC40-205ENST00000571028 PLEKHD1A6NEE1 506 aa21.9■■□□□ 1.1
CCDC40-205ENST00000571028 SAMD9Q5K651 1589 aa21.89■■□□□ 1.09
CCDC40-205ENST00000571028 CFAP74Q9C0B2 1584 aa21.88■■□□□ 1.09
CCDC40-205ENST00000571028 NUP153P49790 1475 aaKnown RBP21.88■■□□□ 1.09
CCDC40-205ENST00000571028 FHOD3Q2V2M9 1422 aa21.88■■□□□ 1.09
CCDC40-205ENST00000571028 MLECQ14165 292 aa21.87■■□□□ 1.09
CCDC40-205ENST00000571028 RANGAP1P46060 587 aaPredicted RBP21.86■■□□□ 1.09
CCDC40-205ENST00000571028 ZFYVE16Q7Z3T8 1539 aa21.85■■□□□ 1.09
CCDC40-205ENST00000571028 EFCAB5A4FU69 1503 aa21.85■■□□□ 1.09
CCDC40-205ENST00000571028 RICTORQ6R327 1708 aa21.84■■□□□ 1.09
CCDC40-205ENST00000571028 ZMYM4Q5VZL5 1548 aa21.81■■□□□ 1.08
CCDC40-205ENST00000571028 DISP3Q9P2K9 1392 aa21.81■■□□□ 1.08
CCDC40-205ENST00000571028 YEATS2Q9ULM3 1422 aa21.8■■□□□ 1.08
CCDC40-205ENST00000571028 MAGI2Q86UL8 1455 aa21.8■■□□□ 1.08
CCDC40-205ENST00000571028 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.77■■□□□ 1.08
CCDC40-205ENST00000571028 TTC37Q6PGP7 1564 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms