RNA–Protein interactions for RNA: ENST00000570692.1

TVP23A-203, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 4

Gene TVP23A, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-203ENST00000570692 KDM4FA0A1W2PPD8 638 aa27.8■■■□□ 2.04
TVP23A-203ENST00000570692 NPM1P06748 294 aaKnown RBP eCLIP27.8■■■□□ 2.04
TVP23A-203ENST00000570692 BIVM-ERCC5R4GMW8 1640 aa27.8■■■□□ 2.04
TVP23A-203ENST00000570692 DIP2BQ9P265 1576 aa27.74■■■□□ 2.03
TVP23A-203ENST00000570692 MAPKBP1O60336 1514 aa27.74■■■□□ 2.03
TVP23A-203ENST00000570692 SUPT5HO00267 1087 aaKnown RBP27.7■■■□□ 2.02
TVP23A-203ENST00000570692 RUSC2Q8N2Y8 1516 aa27.7■■■□□ 2.02
TVP23A-203ENST00000570692 ADCY10Q96PN6 1610 aa27.69■■■□□ 2.02
TVP23A-203ENST00000570692 KDM6BO15054 1643 aa27.68■■■□□ 2.02
TVP23A-203ENST00000570692 ILDR1Q86SU0 546 aaPredicted RBP27.66■■■□□ 2.02
TVP23A-203ENST00000570692 TSPOAP1O95153 1857 aa27.57■■■□□ 2
TVP23A-203ENST00000570692 KIAA0586Q9BVV6 1533 aa27.5■■□□□ 1.99
TVP23A-203ENST00000570692 TTBK1Q5TCY1 1321 aaPredicted RBP27.43■■□□□ 1.98
TVP23A-203ENST00000570692 PTPRGP23470 1445 aa27.41■■□□□ 1.98
TVP23A-203ENST00000570692 IGF1RP08069 1367 aa27.4■■□□□ 1.98
TVP23A-203ENST00000570692 ADGRL1O94910 1474 aa27.37■■□□□ 1.97
TVP23A-203ENST00000570692 ASXL2Q76L83 1435 aa27.33■■□□□ 1.96
TVP23A-203ENST00000570692 ABCC2Q92887 1545 aa27.32■■□□□ 1.96
TVP23A-203ENST00000570692 PPRC1Q5VV67 1664 aaKnown RBP27.31■■□□□ 1.96
TVP23A-203ENST00000570692 CUL7Q14999 1698 aa27.28■■□□□ 1.96
TVP23A-203ENST00000570692 GLI2P10070 1586 aa27.28■■□□□ 1.96
TVP23A-203ENST00000570692 PLB1Q6P1J6 1458 aa27.28■■□□□ 1.96
TVP23A-203ENST00000570692 TNIKQ9UKE5 1360 aa27.28■■□□□ 1.96
TVP23A-203ENST00000570692 KIF27Q86VH2 1401 aa27.27■■□□□ 1.96
TVP23A-203ENST00000570692 COL17A1Q9UMD9 1497 aaPredicted RBP27.26■■□□□ 1.95
TVP23A-203ENST00000570692 CARMIL2Q6F5E8 1435 aa27.24■■□□□ 1.95
TVP23A-203ENST00000570692 HECW2Q9P2P5 1572 aa27.2■■□□□ 1.94
TVP23A-203ENST00000570692 UHRF1BP1LA0JNW5 1464 aa27.19■■□□□ 1.94
TVP23A-203ENST00000570692 CARMIL1Q5VZK9 1371 aa27.18■■□□□ 1.94
TVP23A-203ENST00000570692 UACAQ9BZF9 1416 aa27.16■■□□□ 1.94
TVP23A-203ENST00000570692 EPRSP07814 1512 aaKnown RBP27.15■■□□□ 1.94
TVP23A-203ENST00000570692 IQGAP2Q13576 1575 aa27.11■■□□□ 1.93
TVP23A-203ENST00000570692 MAP3K4Q9Y6R4 1608 aa27.11■■□□□ 1.93
TVP23A-203ENST00000570692 DISP1Q96F81 1524 aa27.09■■□□□ 1.93
TVP23A-203ENST00000570692 KDM5BQ9UGL1 1544 aa27.08■■□□□ 1.93
TVP23A-203ENST00000570692 TEX14Q8IWB6 1497 aa27.07■■□□□ 1.92
TVP23A-203ENST00000570692 ZCCHC11Q5TAX3 1644 aaKnown RBP27.01■■□□□ 1.92
TVP23A-203ENST00000570692 UGGT2Q9NYU1 1516 aa26.93■■□□□ 1.9
TVP23A-203ENST00000570692 WDR7Q9Y4E6 1490 aa26.93■■□□□ 1.9
TVP23A-203ENST00000570692 KIAA0556O60303 1618 aa26.89■■□□□ 1.9
TVP23A-203ENST00000570692 CD109Q6YHK3 1445 aa26.85■■□□□ 1.89
TVP23A-203ENST00000570692 KCNH8Q96L42 1107 aa26.85■■□□□ 1.89
TVP23A-203ENST00000570692 FBXO41Q8TF61 875 aa26.84■■□□□ 1.89
TVP23A-203ENST00000570692 RAPGEF2Q9Y4G8 1499 aa26.83■■□□□ 1.89
TVP23A-203ENST00000570692 MAGI3Q5TCQ9 1506 aa26.83■■□□□ 1.89
TVP23A-203ENST00000570692 KIF21BO75037 1637 aa26.78■■□□□ 1.88
TVP23A-203ENST00000570692 CFAP43Q8NDM7 1665 aa26.76■■□□□ 1.87
TVP23A-203ENST00000570692 ABCA8O94911 1581 aa26.7■■□□□ 1.86
TVP23A-203ENST00000570692 ARAP3Q8WWN8 1544 aa26.65■■□□□ 1.86
TVP23A-203ENST00000570692 PTPRMP28827 1452 aa26.64■■□□□ 1.86
TVP23A-203ENST00000570692 GOLGA3Q08378 1498 aa26.63■■□□□ 1.85
TVP23A-203ENST00000570692 ARID3CA6NKF2 412 aa26.61■■□□□ 1.85
TVP23A-203ENST00000570692 ADAMTSL3P82987 1691 aa26.58■■□□□ 1.85
TVP23A-203ENST00000570692 CTTNBP2Q8WZ74 1663 aa26.58■■□□□ 1.85
TVP23A-203ENST00000570692 RAPGEF3O95398 923 aa26.55■■□□□ 1.84
TVP23A-203ENST00000570692 ATP10BO94823 1461 aa26.51■■□□□ 1.83
TVP23A-203ENST00000570692 PHLDB1Q86UU1 1377 aa26.48■■□□□ 1.83
TVP23A-203ENST00000570692 PCF11O94913 1555 aaKnown RBP26.48■■□□□ 1.83
TVP23A-203ENST00000570692 ARID4BQ4LE39 1312 aaPredicted RBP26.47■■□□□ 1.83
TVP23A-203ENST00000570692 P3H3Q8IVL6 736 aa26.47■■□□□ 1.83
TVP23A-203ENST00000570692 LMTK3Q96Q04 1460 aa26.47■■□□□ 1.83
TVP23A-203ENST00000570692 ABCA9Q8IUA7 1624 aa26.46■■□□□ 1.83
TVP23A-203ENST00000570692 MADDQ8WXG6 1647 aa26.46■■□□□ 1.83
TVP23A-203ENST00000570692 BCORL1Q5H9F3 1711 aa26.44■■□□□ 1.82
TVP23A-203ENST00000570692 NEO1Q92859 1461 aa26.41■■□□□ 1.82
TVP23A-203ENST00000570692 FRMPD1Q5SYB0 1578 aa26.4■■□□□ 1.82
TVP23A-203ENST00000570692 PRXQ9BXM0 1461 aa26.39■■□□□ 1.82
TVP23A-203ENST00000570692 FAM9AQ8IZU1 332 aaPredicted RBP26.39■■□□□ 1.82
TVP23A-203ENST00000570692 HSPA2P54652 639 aa26.37■■□□□ 1.81
TVP23A-203ENST00000570692 PLPPR3Q6T4P5 718 aa26.33■■□□□ 1.81
TVP23A-203ENST00000570692 RIMS1Q86UR5 1692 aaKnown RBP26.32■■□□□ 1.8
TVP23A-203ENST00000570692 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.32■■□□□ 1.8
TVP23A-203ENST00000570692 HNRNPUL2Q1KMD3 747 aaKnown RBP26.32■■□□□ 1.8
TVP23A-203ENST00000570692 ARHGEF40Q8TER5 1519 aa26.28■■□□□ 1.8
TVP23A-203ENST00000570692 CERKQ8TCT0 537 aa26.26■■□□□ 1.79
TVP23A-203ENST00000570692 RAPGEF6Q8TEU7 1601 aa26.25■■□□□ 1.79
TVP23A-203ENST00000570692 DENND4BO75064 1496 aaPredicted RBP26.24■■□□□ 1.79
TVP23A-203ENST00000570692 SAMD9Q5K651 1589 aa26.21■■□□□ 1.79
TVP23A-203ENST00000570692 NUP153P49790 1475 aaKnown RBP26.2■■□□□ 1.78
TVP23A-203ENST00000570692 AKNAQ7Z591 1439 aa26.2■■□□□ 1.78
TVP23A-203ENST00000570692 RICTORQ6R327 1708 aa26.19■■□□□ 1.78
TVP23A-203ENST00000570692 FHOD3Q2V2M9 1422 aa26.19■■□□□ 1.78
TVP23A-203ENST00000570692 POGZQ7Z3K3 1410 aa26.16■■□□□ 1.78
TVP23A-203ENST00000570692 MLECQ14165 292 aa26.16■■□□□ 1.78
TVP23A-203ENST00000570692 FANCAO15360 1455 aa26.16■■□□□ 1.78
TVP23A-203ENST00000570692 YEATS2Q9ULM3 1422 aa26.15■■□□□ 1.78
TVP23A-203ENST00000570692 SIGLEC1Q9BZZ2 1709 aa26.15■■□□□ 1.78
TVP23A-203ENST00000570692 PLEKHD1A6NEE1 506 aa26.13■■□□□ 1.77
TVP23A-203ENST00000570692 RANGAP1P46060 587 aaPredicted RBP26.12■■□□□ 1.77
TVP23A-203ENST00000570692 ILDR2Q71H61 639 aa26.12■■□□□ 1.77
TVP23A-203ENST00000570692 ZFYVE16Q7Z3T8 1539 aa26.11■■□□□ 1.77
TVP23A-203ENST00000570692 ZMYM4Q5VZL5 1548 aa26.1■■□□□ 1.77
TVP23A-203ENST00000570692 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.09■■□□□ 1.77
TVP23A-203ENST00000570692 DISP3Q9P2K9 1392 aa26.08■■□□□ 1.77
TVP23A-203ENST00000570692 EFCAB5A4FU69 1503 aa26.07■■□□□ 1.76
TVP23A-203ENST00000570692 CFAP74Q9C0B2 1584 aa26.07■■□□□ 1.76
TVP23A-203ENST00000570692 TTC37Q6PGP7 1564 aa26.05■■□□□ 1.76
TVP23A-203ENST00000570692 CSRNP3Q8WYN3 585 aa26.04■■□□□ 1.76
TVP23A-203ENST00000570692 MAGI2Q86UL8 1455 aa26.04■■□□□ 1.76
TVP23A-203ENST00000570692 HECW1Q76N89 1606 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms