RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 MAPKBP1O60336 1514 aa19.19■□□□□ 0.66
CTDNEP1-202ENST00000570380 ERICH3Q5RHP9 1530 aa19.19■□□□□ 0.66
CTDNEP1-202ENST00000570380 JPH4Q96JJ6 628 aa19.18■□□□□ 0.66
CTDNEP1-202ENST00000570380 KDM6BO15054 1643 aa19.18■□□□□ 0.66
CTDNEP1-202ENST00000570380 BIVM-ERCC5R4GMW8 1640 aa19.18■□□□□ 0.66
CTDNEP1-202ENST00000570380 TSPOAP1O95153 1857 aa19.17■□□□□ 0.66
CTDNEP1-202ENST00000570380 TOP2BQ02880 1626 aa19.15■□□□□ 0.66
CTDNEP1-202ENST00000570380 NPM1P06748 294 aaKnown RBP eCLIP19.14■□□□□ 0.65
CTDNEP1-202ENST00000570380 ADCY10Q96PN6 1610 aa19.14■□□□□ 0.65
CTDNEP1-202ENST00000570380 RUSC2Q8N2Y8 1516 aa19.11■□□□□ 0.65
CTDNEP1-202ENST00000570380 PPRC1Q5VV67 1664 aaKnown RBP18.95■□□□□ 0.62
CTDNEP1-202ENST00000570380 ADGRL1O94910 1474 aa18.93■□□□□ 0.62
CTDNEP1-202ENST00000570380 KIAA0586Q9BVV6 1533 aa18.93■□□□□ 0.62
CTDNEP1-202ENST00000570380 SUPT5HO00267 1087 aaKnown RBP18.88■□□□□ 0.61
CTDNEP1-202ENST00000570380 GLI2P10070 1586 aa18.87■□□□□ 0.61
CTDNEP1-202ENST00000570380 HECW2Q9P2P5 1572 aa18.87■□□□□ 0.61
CTDNEP1-202ENST00000570380 PTPRGP23470 1445 aa18.85■□□□□ 0.61
CTDNEP1-202ENST00000570380 CUL7Q14999 1698 aa18.84■□□□□ 0.61
CTDNEP1-202ENST00000570380 ABCC2Q92887 1545 aa18.84■□□□□ 0.61
CTDNEP1-202ENST00000570380 COL17A1Q9UMD9 1497 aaPredicted RBP18.83■□□□□ 0.6
CTDNEP1-202ENST00000570380 ASXL2Q76L83 1435 aa18.83■□□□□ 0.6
CTDNEP1-202ENST00000570380 TTBK1Q5TCY1 1321 aaPredicted RBP18.81■□□□□ 0.6
CTDNEP1-202ENST00000570380 PLB1Q6P1J6 1458 aa18.81■□□□□ 0.6
CTDNEP1-202ENST00000570380 IGF1RP08069 1367 aa18.81■□□□□ 0.6
CTDNEP1-202ENST00000570380 TNIKQ9UKE5 1360 aa18.77■□□□□ 0.6
CTDNEP1-202ENST00000570380 MAP3K4Q9Y6R4 1608 aa18.77■□□□□ 0.6
CTDNEP1-202ENST00000570380 UHRF1BP1LA0JNW5 1464 aa18.74■□□□□ 0.59
CTDNEP1-202ENST00000570380 CARMIL2Q6F5E8 1435 aa18.74■□□□□ 0.59
CTDNEP1-202ENST00000570380 EPRSP07814 1512 aaKnown RBP18.72■□□□□ 0.59
CTDNEP1-202ENST00000570380 KIF27Q86VH2 1401 aa18.72■□□□□ 0.59
CTDNEP1-202ENST00000570380 UACAQ9BZF9 1416 aa18.69■□□□□ 0.58
CTDNEP1-202ENST00000570380 TEX14Q8IWB6 1497 aa18.69■□□□□ 0.58
CTDNEP1-202ENST00000570380 IQGAP2Q13576 1575 aa18.68■□□□□ 0.58
CTDNEP1-202ENST00000570380 KDM5BQ9UGL1 1544 aa18.67■□□□□ 0.58
CTDNEP1-202ENST00000570380 ZCCHC11Q5TAX3 1644 aaKnown RBP18.67■□□□□ 0.58
CTDNEP1-202ENST00000570380 CARMIL1Q5VZK9 1371 aa18.66■□□□□ 0.58
CTDNEP1-202ENST00000570380 DISP1Q96F81 1524 aa18.64■□□□□ 0.58
CTDNEP1-202ENST00000570380 FBXO41Q8TF61 875 aa18.6■□□□□ 0.57
CTDNEP1-202ENST00000570380 KIF21BO75037 1637 aa18.56■□□□□ 0.56
CTDNEP1-202ENST00000570380 UGGT2Q9NYU1 1516 aa18.54■□□□□ 0.56
CTDNEP1-202ENST00000570380 WDR7Q9Y4E6 1490 aa18.54■□□□□ 0.56
CTDNEP1-202ENST00000570380 CFAP43Q8NDM7 1665 aa18.54■□□□□ 0.56
CTDNEP1-202ENST00000570380 KIAA0556O60303 1618 aa18.52■□□□□ 0.56
CTDNEP1-202ENST00000570380 MAGI3Q5TCQ9 1506 aa18.52■□□□□ 0.56
CTDNEP1-202ENST00000570380 CD109Q6YHK3 1445 aa18.5■□□□□ 0.55
CTDNEP1-202ENST00000570380 KCNH8Q96L42 1107 aa18.45■□□□□ 0.54
CTDNEP1-202ENST00000570380 ADAMTSL3P82987 1691 aa18.43■□□□□ 0.54
CTDNEP1-202ENST00000570380 RAPGEF2Q9Y4G8 1499 aa18.42■□□□□ 0.54
CTDNEP1-202ENST00000570380 PTPRMP28827 1452 aa18.4■□□□□ 0.54
CTDNEP1-202ENST00000570380 ABCA8O94911 1581 aa18.4■□□□□ 0.54
CTDNEP1-202ENST00000570380 ARAP3Q8WWN8 1544 aa18.39■□□□□ 0.54
CTDNEP1-202ENST00000570380 CTTNBP2Q8WZ74 1663 aa18.38■□□□□ 0.53
CTDNEP1-202ENST00000570380 PCF11O94913 1555 aaKnown RBP18.34■□□□□ 0.53
CTDNEP1-202ENST00000570380 BCORL1Q5H9F3 1711 aa18.33■□□□□ 0.52
CTDNEP1-202ENST00000570380 GOLGA3Q08378 1498 aa18.31■□□□□ 0.52
CTDNEP1-202ENST00000570380 LMTK3Q96Q04 1460 aa18.31■□□□□ 0.52
CTDNEP1-202ENST00000570380 MADDQ8WXG6 1647 aa18.31■□□□□ 0.52
CTDNEP1-202ENST00000570380 ABCA9Q8IUA7 1624 aa18.28■□□□□ 0.52
CTDNEP1-202ENST00000570380 RAPGEF3O95398 923 aa18.27■□□□□ 0.52
CTDNEP1-202ENST00000570380 PHLDB1Q86UU1 1377 aa18.26■□□□□ 0.51
CTDNEP1-202ENST00000570380 RIMS1Q86UR5 1692 aaKnown RBP18.25■□□□□ 0.51
CTDNEP1-202ENST00000570380 ARID3CA6NKF2 412 aa18.24■□□□□ 0.51
CTDNEP1-202ENST00000570380 ATP10BO94823 1461 aa18.24■□□□□ 0.51
CTDNEP1-202ENST00000570380 FRMPD1Q5SYB0 1578 aa18.24■□□□□ 0.51
CTDNEP1-202ENST00000570380 ARID4BQ4LE39 1312 aaPredicted RBP18.21■□□□□ 0.51
CTDNEP1-202ENST00000570380 NEO1Q92859 1461 aa18.2■□□□□ 0.5
CTDNEP1-202ENST00000570380 HSPA2P54652 639 aa18.19■□□□□ 0.5
CTDNEP1-202ENST00000570380 CERKQ8TCT0 537 aa18.16■□□□□ 0.5
CTDNEP1-202ENST00000570380 ARHGEF40Q8TER5 1519 aa18.15■□□□□ 0.5
CTDNEP1-202ENST00000570380 RICTORQ6R327 1708 aa18.15■□□□□ 0.5
CTDNEP1-202ENST00000570380 P3H3Q8IVL6 736 aa18.13■□□□□ 0.49
CTDNEP1-202ENST00000570380 ILDR2Q71H61 639 aa18.12■□□□□ 0.49
CTDNEP1-202ENST00000570380 SIGLEC1Q9BZZ2 1709 aa18.12■□□□□ 0.49
CTDNEP1-202ENST00000570380 PLPPR3Q6T4P5 718 aa18.11■□□□□ 0.49
CTDNEP1-202ENST00000570380 RAPGEF6Q8TEU7 1601 aa18.1■□□□□ 0.49
CTDNEP1-202ENST00000570380 PRXQ9BXM0 1461 aa18.1■□□□□ 0.49
CTDNEP1-202ENST00000570380 FAM9AQ8IZU1 332 aaPredicted RBP18.1■□□□□ 0.49
CTDNEP1-202ENST00000570380 DISP3Q9P2K9 1392 aa18.07■□□□□ 0.48
CTDNEP1-202ENST00000570380 SOCS7O14512 581 aa18.07■□□□□ 0.48
CTDNEP1-202ENST00000570380 DENND4BO75064 1496 aaPredicted RBP18.07■□□□□ 0.48
CTDNEP1-202ENST00000570380 FER1L4A9Z1Z3 1794 aa18.06■□□□□ 0.48
CTDNEP1-202ENST00000570380 SAMD9Q5K651 1589 aa18.05■□□□□ 0.48
CTDNEP1-202ENST00000570380 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.05■□□□□ 0.48
CTDNEP1-202ENST00000570380 HNRNPUL2Q1KMD3 747 aaKnown RBP18.05■□□□□ 0.48
CTDNEP1-202ENST00000570380 FANCAO15360 1455 aa18.05■□□□□ 0.48
CTDNEP1-202ENST00000570380 FHOD3Q2V2M9 1422 aa18.04■□□□□ 0.48
CTDNEP1-202ENST00000570380 POGZQ7Z3K3 1410 aa18.04■□□□□ 0.48
CTDNEP1-202ENST00000570380 AKNAQ7Z591 1439 aa18.04■□□□□ 0.48
CTDNEP1-202ENST00000570380 ZMYM4Q5VZL5 1548 aa18.03■□□□□ 0.48
CTDNEP1-202ENST00000570380 TTC37Q6PGP7 1564 aa18.02■□□□□ 0.48
CTDNEP1-202ENST00000570380 CFAP74Q9C0B2 1584 aa18.02■□□□□ 0.48
CTDNEP1-202ENST00000570380 NUP153P49790 1475 aaKnown RBP18.01■□□□□ 0.47
CTDNEP1-202ENST00000570380 YEATS2Q9ULM3 1422 aa18.01■□□□□ 0.47
CTDNEP1-202ENST00000570380 ZFYVE16Q7Z3T8 1539 aa18.01■□□□□ 0.47
CTDNEP1-202ENST00000570380 PREX1Q8TCU6 1659 aa17.99■□□□□ 0.47
CTDNEP1-202ENST00000570380 STRCQ7RTU9 1775 aa17.99■□□□□ 0.47
CTDNEP1-202ENST00000570380 EFCAB5A4FU69 1503 aa17.99■□□□□ 0.47
CTDNEP1-202ENST00000570380 MLECQ14165 292 aa17.98■□□□□ 0.47
CTDNEP1-202ENST00000570380 HECW1Q76N89 1606 aa17.97■□□□□ 0.47
CTDNEP1-202ENST00000570380 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms