RNA–Protein interactions for RNA: ENST00000569829.1

RPAP1-212, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 597 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-212ENST00000569829 ERICH3Q5RHP9 1530 aa18.26■□□□□ 0.51
RPAP1-212ENST00000569829 ABCC10Q5T3U5 1492 aa18.23■□□□□ 0.51
RPAP1-212ENST00000569829 KDM4FA0A1W2PPD8 638 aa18.22■□□□□ 0.51
RPAP1-212ENST00000569829 RUSC2Q8N2Y8 1516 aa18.2■□□□□ 0.5
RPAP1-212ENST00000569829 DIP2BQ9P265 1576 aa18.19■□□□□ 0.5
RPAP1-212ENST00000569829 ADCY10Q96PN6 1610 aa18.19■□□□□ 0.5
RPAP1-212ENST00000569829 NPM1P06748 294 aaKnown RBP eCLIP18.17■□□□□ 0.5
RPAP1-212ENST00000569829 TSPOAP1O95153 1857 aa18.16■□□□□ 0.5
RPAP1-212ENST00000569829 MAPKBP1O60336 1514 aa18.14■□□□□ 0.49
RPAP1-212ENST00000569829 TTBK1Q5TCY1 1321 aaPredicted RBP18.13■□□□□ 0.49
RPAP1-212ENST00000569829 KDM6BO15054 1643 aa18.12■□□□□ 0.49
RPAP1-212ENST00000569829 ILDR1Q86SU0 546 aaPredicted RBP18.05■□□□□ 0.48
RPAP1-212ENST00000569829 IGF1RP08069 1367 aa18.04■□□□□ 0.48
RPAP1-212ENST00000569829 KIAA0586Q9BVV6 1533 aa18.03■□□□□ 0.48
RPAP1-212ENST00000569829 PTPRGP23470 1445 aa17.98■□□□□ 0.47
RPAP1-212ENST00000569829 PPRC1Q5VV67 1664 aaKnown RBP17.96■□□□□ 0.47
RPAP1-212ENST00000569829 COL17A1Q9UMD9 1497 aaPredicted RBP17.94■□□□□ 0.46
RPAP1-212ENST00000569829 ASXL2Q76L83 1435 aa17.93■□□□□ 0.46
RPAP1-212ENST00000569829 KIF27Q86VH2 1401 aa17.93■□□□□ 0.46
RPAP1-212ENST00000569829 ADGRL1O94910 1474 aa17.91■□□□□ 0.46
RPAP1-212ENST00000569829 ABCC2Q92887 1545 aa17.91■□□□□ 0.46
RPAP1-212ENST00000569829 CUL7Q14999 1698 aa17.9■□□□□ 0.46
RPAP1-212ENST00000569829 CARMIL1Q5VZK9 1371 aa17.9■□□□□ 0.46
RPAP1-212ENST00000569829 TNIKQ9UKE5 1360 aa17.9■□□□□ 0.46
RPAP1-212ENST00000569829 GLI2P10070 1586 aa17.85■□□□□ 0.45
RPAP1-212ENST00000569829 PLB1Q6P1J6 1458 aa17.84■□□□□ 0.45
RPAP1-212ENST00000569829 CARMIL2Q6F5E8 1435 aa17.83■□□□□ 0.45
RPAP1-212ENST00000569829 DISP1Q96F81 1524 aa17.82■□□□□ 0.44
RPAP1-212ENST00000569829 UACAQ9BZF9 1416 aa17.82■□□□□ 0.44
RPAP1-212ENST00000569829 EPRSP07814 1512 aaKnown RBP17.82■□□□□ 0.44
RPAP1-212ENST00000569829 IQGAP2Q13576 1575 aa17.81■□□□□ 0.44
RPAP1-212ENST00000569829 UHRF1BP1LA0JNW5 1464 aa17.8■□□□□ 0.44
RPAP1-212ENST00000569829 HECW2Q9P2P5 1572 aa17.79■□□□□ 0.44
RPAP1-212ENST00000569829 MAP3K4Q9Y6R4 1608 aa17.78■□□□□ 0.44
RPAP1-212ENST00000569829 KDM5BQ9UGL1 1544 aa17.76■□□□□ 0.43
RPAP1-212ENST00000569829 ZCCHC11Q5TAX3 1644 aaKnown RBP17.76■□□□□ 0.43
RPAP1-212ENST00000569829 KIAA0556O60303 1618 aa17.69■□□□□ 0.42
RPAP1-212ENST00000569829 UGGT2Q9NYU1 1516 aa17.68■□□□□ 0.42
RPAP1-212ENST00000569829 TEX14Q8IWB6 1497 aa17.68■□□□□ 0.42
RPAP1-212ENST00000569829 KCNH8Q96L42 1107 aa17.67■□□□□ 0.42
RPAP1-212ENST00000569829 WDR7Q9Y4E6 1490 aa17.65■□□□□ 0.42
RPAP1-212ENST00000569829 RAPGEF2Q9Y4G8 1499 aa17.65■□□□□ 0.42
RPAP1-212ENST00000569829 ARID3CA6NKF2 412 aa17.62■□□□□ 0.41
RPAP1-212ENST00000569829 CD109Q6YHK3 1445 aa17.62■□□□□ 0.41
RPAP1-212ENST00000569829 KIF21BO75037 1637 aa17.59■□□□□ 0.41
RPAP1-212ENST00000569829 MAGI3Q5TCQ9 1506 aa17.57■□□□□ 0.4
RPAP1-212ENST00000569829 ABCA8O94911 1581 aa17.56■□□□□ 0.4
RPAP1-212ENST00000569829 CFAP43Q8NDM7 1665 aa17.55■□□□□ 0.4
RPAP1-212ENST00000569829 P3H3Q8IVL6 736 aa17.52■□□□□ 0.4
RPAP1-212ENST00000569829 CTTNBP2Q8WZ74 1663 aa17.52■□□□□ 0.39
RPAP1-212ENST00000569829 RAPGEF3O95398 923 aa17.47■□□□□ 0.39
RPAP1-212ENST00000569829 FBXO41Q8TF61 875 aa17.47■□□□□ 0.39
RPAP1-212ENST00000569829 ATP10BO94823 1461 aa17.44■□□□□ 0.38
RPAP1-212ENST00000569829 PTPRMP28827 1452 aa17.44■□□□□ 0.38
RPAP1-212ENST00000569829 GOLGA3Q08378 1498 aa17.44■□□□□ 0.38
RPAP1-212ENST00000569829 ARAP3Q8WWN8 1544 aa17.44■□□□□ 0.38
RPAP1-212ENST00000569829 ADAMTSL3P82987 1691 aa17.42■□□□□ 0.38
RPAP1-212ENST00000569829 PRXQ9BXM0 1461 aa17.39■□□□□ 0.37
RPAP1-212ENST00000569829 PLPPR3Q6T4P5 718 aa17.37■□□□□ 0.37
RPAP1-212ENST00000569829 ABCA9Q8IUA7 1624 aa17.36■□□□□ 0.37
RPAP1-212ENST00000569829 MADDQ8WXG6 1647 aa17.36■□□□□ 0.37
RPAP1-212ENST00000569829 ARID4BQ4LE39 1312 aaPredicted RBP17.36■□□□□ 0.37
RPAP1-212ENST00000569829 FRMPD1Q5SYB0 1578 aa17.36■□□□□ 0.37
RPAP1-212ENST00000569829 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.34■□□□□ 0.37
RPAP1-212ENST00000569829 HSPA2P54652 639 aa17.34■□□□□ 0.37
RPAP1-212ENST00000569829 HNRNPUL2Q1KMD3 747 aaKnown RBP17.34■□□□□ 0.37
RPAP1-212ENST00000569829 BCORL1Q5H9F3 1711 aa17.34■□□□□ 0.37
RPAP1-212ENST00000569829 LMTK3Q96Q04 1460 aa17.33■□□□□ 0.37
RPAP1-212ENST00000569829 RANGAP1P46060 587 aaPredicted RBP17.33■□□□□ 0.36
RPAP1-212ENST00000569829 PCF11O94913 1555 aaKnown RBP17.31■□□□□ 0.36
RPAP1-212ENST00000569829 RIMS1Q86UR5 1692 aaKnown RBP17.29■□□□□ 0.36
RPAP1-212ENST00000569829 NEO1Q92859 1461 aa17.28■□□□□ 0.36
RPAP1-212ENST00000569829 RAPGEF6Q8TEU7 1601 aa17.28■□□□□ 0.36
RPAP1-212ENST00000569829 SIGLEC1Q9BZZ2 1709 aa17.27■□□□□ 0.35
RPAP1-212ENST00000569829 PHLDB1Q86UU1 1377 aa17.27■□□□□ 0.35
RPAP1-212ENST00000569829 SAMD9Q5K651 1589 aa17.26■□□□□ 0.35
RPAP1-212ENST00000569829 NUP153P49790 1475 aaKnown RBP17.25■□□□□ 0.35
RPAP1-212ENST00000569829 FHOD3Q2V2M9 1422 aa17.23■□□□□ 0.35
RPAP1-212ENST00000569829 MLECQ14165 292 aa17.23■□□□□ 0.35
RPAP1-212ENST00000569829 YEATS2Q9ULM3 1422 aa17.21■□□□□ 0.35
RPAP1-212ENST00000569829 ARHGEF40Q8TER5 1519 aa17.21■□□□□ 0.35
RPAP1-212ENST00000569829 RICTORQ6R327 1708 aa17.21■□□□□ 0.35
RPAP1-212ENST00000569829 DENND4BO75064 1496 aaPredicted RBP17.21■□□□□ 0.35
RPAP1-212ENST00000569829 FAM9AQ8IZU1 332 aaPredicted RBP17.21■□□□□ 0.35
RPAP1-212ENST00000569829 AKNAQ7Z591 1439 aa17.21■□□□□ 0.34
RPAP1-212ENST00000569829 CSRNP3Q8WYN3 585 aa17.19■□□□□ 0.34
RPAP1-212ENST00000569829 FANCAO15360 1455 aa17.17■□□□□ 0.34
RPAP1-212ENST00000569829 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.16■□□□□ 0.34
RPAP1-212ENST00000569829 TTC37Q6PGP7 1564 aa17.16■□□□□ 0.34
RPAP1-212ENST00000569829 PLEKHD1A6NEE1 506 aa17.16■□□□□ 0.34
RPAP1-212ENST00000569829 CERKQ8TCT0 537 aa17.16■□□□□ 0.34
RPAP1-212ENST00000569829 CEBPAP49715 358 aaPredicted RBP17.13■□□□□ 0.33
RPAP1-212ENST00000569829 ZFYVE16Q7Z3T8 1539 aa17.12■□□□□ 0.33
RPAP1-212ENST00000569829 HECW1Q76N89 1606 aa17.11■□□□□ 0.33
RPAP1-212ENST00000569829 ILDR2Q71H61 639 aa17.11■□□□□ 0.33
RPAP1-212ENST00000569829 CDK13Q14004 1512 aaKnown RBP17.11■□□□□ 0.33
RPAP1-212ENST00000569829 ZMYM4Q5VZL5 1548 aa17.1■□□□□ 0.33
RPAP1-212ENST00000569829 FER1L4A9Z1Z3 1794 aa17.09■□□□□ 0.33
RPAP1-212ENST00000569829 POGZQ7Z3K3 1410 aa17.08■□□□□ 0.32
RPAP1-212ENST00000569829 SCAPERQ9BY12 1400 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms