RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 PCGF6Q9BYE7 350 aa35.36■■■■□ 3.25
VCPKMT-205ENST00000569518 SNAPC4Q5SXM2 1469 aa35.21■■■■□ 3.23
VCPKMT-205ENST00000569518 PPARGC1BQ86YN6 1023 aaKnown RBP35.2■■■■□ 3.23
VCPKMT-205ENST00000569518 EFCAB5A4FU69 1503 aa35.18■■■■□ 3.22
VCPKMT-205ENST00000569518 MAGI1Q96QZ7 1491 aaPredicted RBP35.17■■■■□ 3.22
VCPKMT-205ENST00000569518 SAMD9Q5K651 1589 aa35.06■■■■□ 3.2
VCPKMT-205ENST00000569518 GRIN2AQ12879 1464 aa35.05■■■■□ 3.2
VCPKMT-205ENST00000569518 SYNJ2O15056 1496 aa35.03■■■■□ 3.2
VCPKMT-205ENST00000569518 IQGAP2Q13576 1575 aa35.01■■■■□ 3.2
VCPKMT-205ENST00000569518 FHOD3Q2V2M9 1422 aa34.97■■■■□ 3.19
VCPKMT-205ENST00000569518 APLP2Q06481 763 aa34.95■■■■□ 3.18
VCPKMT-205ENST00000569518 KIAA0586Q9BVV6 1533 aa34.9■■■■□ 3.18
VCPKMT-205ENST00000569518 TTBK1Q5TCY1 1321 aaPredicted RBP34.88■■■■□ 3.17
VCPKMT-205ENST00000569518 PCF11O94913 1555 aaKnown RBP34.88■■■■□ 3.17
VCPKMT-205ENST00000569518 P3H3Q8IVL6 736 aa34.88■■■■□ 3.17
VCPKMT-205ENST00000569518 UGGT2Q9NYU1 1516 aa34.87■■■■□ 3.17
VCPKMT-205ENST00000569518 CEP170Q5SW79 1584 aa34.85■■■■□ 3.17
VCPKMT-205ENST00000569518 MAP3K1Q13233 1512 aa34.85■■■■□ 3.17
VCPKMT-205ENST00000569518 CHMP7Q8WUX9 453 aaPredicted RBP34.83■■■■□ 3.17
VCPKMT-205ENST00000569518 FMN1Q68DA7 1419 aa34.82■■■■□ 3.16
VCPKMT-205ENST00000569518 NUP160Q12769 1436 aa34.81■■■■□ 3.16
VCPKMT-205ENST00000569518 FYCO1Q9BQS8 1478 aa34.8■■■■□ 3.16
VCPKMT-205ENST00000569518 CASKIN1Q8WXD9 1431 aa34.79■■■■□ 3.16
VCPKMT-205ENST00000569518 TIAM1Q13009 1591 aa34.78■■■■□ 3.16
VCPKMT-205ENST00000569518 CFAP43Q8NDM7 1665 aa34.74■■■■□ 3.15
VCPKMT-205ENST00000569518 KANK4Q5T7N3 995 aaPredicted RBP34.73■■■■□ 3.15
VCPKMT-205ENST00000569518 FBLN2P98095 1184 aa34.69■■■■□ 3.14
VCPKMT-205ENST00000569518 DISP1Q96F81 1524 aa34.67■■■■□ 3.14
VCPKMT-205ENST00000569518 KIAA0556O60303 1618 aa34.67■■■■□ 3.14
VCPKMT-205ENST00000569518 CHD1O14646 1710 aa34.64■■■■□ 3.14
VCPKMT-205ENST00000569518 LRRC9Q6ZRR7 1453 aa34.6■■■■□ 3.13
VCPKMT-205ENST00000569518 LRRIQ1Q96JM4 1722 aa34.57■■■■□ 3.12
VCPKMT-205ENST00000569518 HECW1Q76N89 1606 aa34.48■■■■□ 3.11
VCPKMT-205ENST00000569518 HRCP23327 699 aa34.48■■■■□ 3.11
VCPKMT-205ENST00000569518 ATP1B4Q9UN42 357 aaPredicted RBP34.48■■■■□ 3.11
VCPKMT-205ENST00000569518 JPH4Q96JJ6 628 aa34.45■■■■□ 3.11
VCPKMT-205ENST00000569518 RRBP1Q9P2E9 1410 aaKnown RBP34.43■■■■□ 3.1
VCPKMT-205ENST00000569518 CARMIL2Q6F5E8 1435 aa34.41■■■■□ 3.1
VCPKMT-205ENST00000569518 CCDC18Q5T9S5 1454 aa34.4■■■■□ 3.1
VCPKMT-205ENST00000569518 SHROOM2Q13796 1616 aa34.35■■■■□ 3.09
VCPKMT-205ENST00000569518 EPRSP07814 1512 aaKnown RBP34.34■■■■□ 3.09
VCPKMT-205ENST00000569518 RAPGEF6Q8TEU7 1601 aa34.33■■■■□ 3.09
VCPKMT-205ENST00000569518 PHLDB1Q86UU1 1377 aa34.29■■■■□ 3.08
VCPKMT-205ENST00000569518 EHBP1L1Q8N3D4 1523 aa34.28■■■■□ 3.08
VCPKMT-205ENST00000569518 NUP153P49790 1475 aaKnown RBP34.27■■■■□ 3.08
VCPKMT-205ENST00000569518 CCNB3Q8WWL7 1395 aa34.26■■■■□ 3.08
VCPKMT-205ENST00000569518 MAGI3Q5TCQ9 1506 aa34.26■■■■□ 3.07
VCPKMT-205ENST00000569518 CLASP1Q7Z460 1538 aa34.26■■■■□ 3.07
VCPKMT-205ENST00000569518 MTUS2Q5JR59 1369 aa34.26■■■■□ 3.07
VCPKMT-205ENST00000569518 PRG4Q92954 1404 aaPredicted RBP34.25■■■■□ 3.07
VCPKMT-205ENST00000569518 CDK13Q14004 1512 aaKnown RBP34.24■■■■□ 3.07
VCPKMT-205ENST00000569518 PLB1Q6P1J6 1458 aa34.19■■■■□ 3.06
VCPKMT-205ENST00000569518 SUPT6HQ7KZ85 1726 aaKnown RBP34.18■■■■□ 3.06
VCPKMT-205ENST00000569518 HNRNPUL2Q1KMD3 747 aaKnown RBP34.17■■■■□ 3.06
VCPKMT-205ENST00000569518 ABCA8O94911 1581 aa34.17■■■■□ 3.06
VCPKMT-205ENST00000569518 ARHGEF11O15085 1522 aa34.15■■■■□ 3.06
VCPKMT-205ENST00000569518 NCOA2Q15596 1464 aa34.14■■■■□ 3.06
VCPKMT-205ENST00000569518 ERCC6L2Q5T890 1561 aa34.06■■■■□ 3.04
VCPKMT-205ENST00000569518 PTPRGP23470 1445 aa34.04■■■■□ 3.04
VCPKMT-205ENST00000569518 FGD6Q6ZV73 1430 aa34.04■■■■□ 3.04
VCPKMT-205ENST00000569518 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.03■■■■□ 3.04
VCPKMT-205ENST00000569518 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.02■■■■□ 3.04
VCPKMT-205ENST00000569518 ARID3CA6NKF2 412 aa34.02■■■■□ 3.04
VCPKMT-205ENST00000569518 MYOM3Q5VTT5 1437 aa34.02■■■■□ 3.04
VCPKMT-205ENST00000569518 ZEB1P37275 1124 aaPredicted RBP33.97■■■■□ 3.03
VCPKMT-205ENST00000569518 CDK11AQ9UQ88 783 aaPredicted RBP33.92■■■■□ 3.02
VCPKMT-205ENST00000569518 TROQ12816 1431 aaPredicted RBP33.91■■■■□ 3.02
VCPKMT-205ENST00000569518 CCER1Q8TC90 406 aaPredicted RBP33.9■■■■□ 3.02
VCPKMT-205ENST00000569518 ATP10BO94823 1461 aa33.9■■■■□ 3.02
VCPKMT-205ENST00000569518 FAM50AQ14320 339 aaKnown RBP33.89■■■■□ 3.02
VCPKMT-205ENST00000569518 ADCY10Q96PN6 1610 aa33.88■■■■□ 3.01
VCPKMT-205ENST00000569518 UACAQ9BZF9 1416 aa33.88■■■■□ 3.01
VCPKMT-205ENST00000569518 PTPN23Q9H3S7 1636 aa33.85■■■■□ 3.01
VCPKMT-205ENST00000569518 TCOF1Q13428 1488 aaKnown RBP33.83■■■■□ 3.01
VCPKMT-205ENST00000569518 ITGAEP38570 1179 aa33.81■■■■□ 3
VCPKMT-205ENST00000569518 ABCC2Q92887 1545 aa33.81■■■■□ 3
VCPKMT-205ENST00000569518 MIA2Q96PC5 1412 aa33.81■■■■□ 3
VCPKMT-205ENST00000569518 KIF14Q15058 1648 aa33.78■■■■□ 3
VCPKMT-205ENST00000569518 UHRF1BP1LA0JNW5 1464 aa33.73■■■□□ 2.99
VCPKMT-205ENST00000569518 OSCARQ8IYS5 282 aa33.72■■■□□ 2.99
VCPKMT-205ENST00000569518 ITSN2Q9NZM3 1697 aa33.69■■■□□ 2.98
VCPKMT-205ENST00000569518 PLEKHD1A6NEE1 506 aa33.69■■■□□ 2.98
VCPKMT-205ENST00000569518 PTPRKQ15262 1439 aa33.67■■■□□ 2.98
VCPKMT-205ENST00000569518 SETD5Q9C0A6 1442 aa33.65■■■□□ 2.98
VCPKMT-205ENST00000569518 ABCC10Q5T3U5 1492 aa33.65■■■□□ 2.98
VCPKMT-205ENST00000569518 GPATCH8Q9UKJ3 1502 aaKnown RBP33.64■■■□□ 2.98
VCPKMT-205ENST00000569518 RAB3GAP2Q9H2M9 1393 aa33.63■■■□□ 2.97
VCPKMT-205ENST00000569518 KDM5BQ9UGL1 1544 aa33.6■■■□□ 2.97
VCPKMT-205ENST00000569518 DHX57Q6P158 1386 aaKnown RBP33.6■■■□□ 2.97
VCPKMT-205ENST00000569518 ZCCHC11Q5TAX3 1644 aaKnown RBP33.59■■■□□ 2.97
VCPKMT-205ENST00000569518 CDC42BPAQ5VT25 1732 aa33.58■■■□□ 2.97
VCPKMT-205ENST00000569518 HFM1A2PYH4 1435 aa33.54■■■□□ 2.96
VCPKMT-205ENST00000569518 DNMT1P26358 1616 aaKnown RBP33.53■■■□□ 2.96
VCPKMT-205ENST00000569518 CAMSAP2Q08AD1 1489 aa33.5■■■□□ 2.95
VCPKMT-205ENST00000569518 CLSPNQ9HAW4 1339 aa33.48■■■□□ 2.95
VCPKMT-205ENST00000569518 CFDP1Q9UEE9 299 aaPredicted RBP33.47■■■□□ 2.95
VCPKMT-205ENST00000569518 AKNAQ7Z591 1439 aa33.47■■■□□ 2.95
VCPKMT-205ENST00000569518 ZNF644Q9H582 1327 aaPredicted RBP33.47■■■□□ 2.95
VCPKMT-205ENST00000569518 DAPK1P53355 1430 aa33.45■■■□□ 2.95
VCPKMT-205ENST00000569518 NAIPQ13075 1403 aa33.45■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms