RNA–Protein interactions for RNA: ENST00000569374.1

CCDC113-205, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-205ENST00000569374 SPRYD3Q8NCJ5 442 aa15.27■□□□□ 0.04
CCDC113-205ENST00000569374 CC2D2AQ9P2K1 1620 aa15.24■□□□□ 0.03
CCDC113-205ENST00000569374 SHROOM4Q9ULL8 1493 aa15.22■□□□□ 0.03
CCDC113-205ENST00000569374 EIF4G1Q04637 1599 aaKnown RBP15.21■□□□□ 0.03
CCDC113-205ENST00000569374 CHGAP10645 457 aaKnown RBP15.2■□□□□ 0.02
CCDC113-205ENST00000569374 GSE1Q14687 1217 aa15.2■□□□□ 0.02
CCDC113-205ENST00000569374 SPDYE1Q8NFV5 336 aaPredicted RBP15.14■□□□□ 0.01
CCDC113-205ENST00000569374 RBM42Q9BTD8 480 aaKnown RBP15.14■□□□□ 0.01
CCDC113-205ENST00000569374 TAOK2Q9UL54 1235 aa15.14■□□□□ 0.01
CCDC113-205ENST00000569374 KDM2AQ9Y2K7 1162 aa15.11■□□□□ 0.01
CCDC113-205ENST00000569374 CECR2Q9BXF3 1484 aa15.08■□□□□ 0
CCDC113-205ENST00000569374 HS6ST3Q8IZP7 471 aa15.07■□□□□ 0
CCDC113-205ENST00000569374 AKT1S1Q96B36 256 aa15.07■□□□□ 0
CCDC113-205ENST00000569374 NUBP1P53384 320 aa15.02■□□□□ -0
CCDC113-205ENST00000569374 DCAF8Q5TAQ9 597 aa15.02■□□□□ -0
CCDC113-205ENST00000569374 TSHZ2Q9NRE2 1034 aa15.01□□□□□ -0.01
CCDC113-205ENST00000569374 FAM212AQ96EL1 285 aa15□□□□□ -0.01
CCDC113-205ENST00000569374 PRR29P0C7W0 189 aa14.99□□□□□ -0.01
CCDC113-205ENST00000569374 DNAJC5Q9H3Z4 198 aa14.99□□□□□ -0.01
CCDC113-205ENST00000569374 CLEC11AQ9Y240 323 aa14.98□□□□□ -0.01
CCDC113-205ENST00000569374 RIOK3O14730 519 aaKnown RBP14.97□□□□□ -0.01
CCDC113-205ENST00000569374 RNF25Q96BH1 459 aaPredicted RBP14.93□□□□□ -0.02
CCDC113-205ENST00000569374 CREBZFQ9NS37 354 aa14.89□□□□□ -0.03
CCDC113-205ENST00000569374 VGFO15240 615 aaPredicted RBP14.87□□□□□ -0.03
CCDC113-205ENST00000569374 PRKCSHP14314 528 aaPredicted RBP14.87□□□□□ -0.03
CCDC113-205ENST00000569374 CHRM1P11229 460 aaPredicted RBP14.86□□□□□ -0.03
CCDC113-205ENST00000569374 REM2Q8IYK8 340 aaPredicted RBP14.86□□□□□ -0.03
CCDC113-205ENST00000569374 STK25O00506 426 aa14.83□□□□□ -0.04
CCDC113-205ENST00000569374 MNX1P50219 401 aaPredicted RBP14.82□□□□□ -0.04
CCDC113-205ENST00000569374 NBR1Q14596 966 aa14.82□□□□□ -0.04
CCDC113-205ENST00000569374 TPRNQ4KMQ1 711 aa14.82□□□□□ -0.04
CCDC113-205ENST00000569374 RYDENQ9NUL5 291 aaKnown RBP14.81□□□□□ -0.04
CCDC113-205ENST00000569374 SMARCA4P51532 1647 aa14.81□□□□□ -0.04
CCDC113-205ENST00000569374 SGIP1Q9BQI5 828 aa14.77□□□□□ -0.05
CCDC113-205ENST00000569374 NKX1-1Q15270 411 aaPredicted RBP14.75□□□□□ -0.05
CCDC113-205ENST00000569374 RASEFQ8IZ41 740 aa14.75□□□□□ -0.05
CCDC113-205ENST00000569374 GTPBP6O43824 516 aaPredicted RBP14.73□□□□□ -0.05
CCDC113-205ENST00000569374 STK24Q9Y6E0 443 aa14.69□□□□□ -0.06
CCDC113-205ENST00000569374 ATAD2BQ9ULI0 1458 aa14.69□□□□□ -0.06
CCDC113-205ENST00000569374 BCL11BQ9C0K0 894 aaPredicted RBP14.68□□□□□ -0.06
CCDC113-205ENST00000569374 MROH2BQ7Z745 1585 aa14.66□□□□□ -0.06
CCDC113-205ENST00000569374 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.66□□□□□ -0.06
CCDC113-205ENST00000569374 PITPNM1O00562 1244 aa14.66□□□□□ -0.06
CCDC113-205ENST00000569374 PYGBP11216 843 aa14.66□□□□□ -0.06
CCDC113-205ENST00000569374 ZFP91Q96JP5 570 aaPredicted RBP14.66□□□□□ -0.06
CCDC113-205ENST00000569374 BAZ1AQ9NRL2 1556 aaPredicted RBP14.64□□□□□ -0.07
CCDC113-205ENST00000569374 NCAPD3P42695 1498 aa14.63□□□□□ -0.07
CCDC113-205ENST00000569374 HMGXB3Q12766 1538 aa14.62□□□□□ -0.07
CCDC113-205ENST00000569374 SMARCA2P51531 1590 aa14.6□□□□□ -0.07
CCDC113-205ENST00000569374 ZNF467Q7Z7K2 595 aaPredicted RBP14.59□□□□□ -0.07
CCDC113-205ENST00000569374 PEG3Q9GZU2 1588 aa14.59□□□□□ -0.07
CCDC113-205ENST00000569374 NESP48681 1621 aa14.57□□□□□ -0.08
CCDC113-205ENST00000569374 WIZO95785 1651 aa14.55□□□□□ -0.08
CCDC113-205ENST00000569374 BAZ1BQ9UIG0 1483 aaKnown RBP14.54□□□□□ -0.08
CCDC113-205ENST00000569374 TSPYL2Q9H2G4 693 aaPredicted RBP14.5□□□□□ -0.09
CCDC113-205ENST00000569374 P3H3Q8IVL6 736 aa14.49□□□□□ -0.09
CCDC113-205ENST00000569374 PDAP1Q13442 181 aaKnown RBP14.48□□□□□ -0.09
CCDC113-205ENST00000569374 FARP1Q9Y4F1 1045 aaPredicted RBP14.46□□□□□ -0.09
CCDC113-205ENST00000569374 KIF21AQ7Z4S6 1674 aa14.46□□□□□ -0.1
CCDC113-205ENST00000569374 CHADLQ6NUI6 762 aa14.44□□□□□ -0.1
CCDC113-205ENST00000569374 WDR70Q9NW82 654 aa14.42□□□□□ -0.1
CCDC113-205ENST00000569374 ERCC6Q03468 1493 aa14.42□□□□□ -0.1
CCDC113-205ENST00000569374 THOC2Q8NI27 1593 aaKnown RBP14.42□□□□□ -0.1
CCDC113-205ENST00000569374 PAK3O75914 559 aaPredicted RBP14.38□□□□□ -0.11
CCDC113-205ENST00000569374 ZNF579Q8NAF0 562 aaKnown RBP14.38□□□□□ -0.11
CCDC113-205ENST00000569374 LAMC3Q9Y6N6 1575 aa14.34□□□□□ -0.11
CCDC113-205ENST00000569374 PRKAR2AP13861 404 aaKnown RBP14.34□□□□□ -0.11
CCDC113-205ENST00000569374 PSEN1P49768 467 aa14.34□□□□□ -0.11
CCDC113-205ENST00000569374 PCDHB8Q9UN66 801 aa14.33□□□□□ -0.12
CCDC113-205ENST00000569374 PCDHB13Q9Y5F0 798 aa14.33□□□□□ -0.12
CCDC113-205ENST00000569374 CCDC61Q9Y6R9 512 aa14.33□□□□□ -0.12
CCDC113-205ENST00000569374 RSF1Q96T23 1441 aaPredicted RBP14.32□□□□□ -0.12
CCDC113-205ENST00000569374 CUX2O14529 1486 aa14.31□□□□□ -0.12
CCDC113-205ENST00000569374 TOP2AP11388 1531 aaKnown RBP14.26□□□□□ -0.13
CCDC113-205ENST00000569374 MFRPQ9BY79 579 aa14.25□□□□□ -0.13
CCDC113-205ENST00000569374 TULP1O00294 542 aaPredicted RBP14.23□□□□□ -0.13
CCDC113-205ENST00000569374 FXR2P51116 673 aaKnown RBP eCLIP14.23□□□□□ -0.13
CCDC113-205ENST00000569374 NLRP6P59044 892 aa14.22□□□□□ -0.13
CCDC113-205ENST00000569374 SOX12O15370 315 aa14.21□□□□□ -0.13
CCDC113-205ENST00000569374 CADPS2Q86UW7 1296 aa14.21□□□□□ -0.13
CCDC113-205ENST00000569374 KCNV2Q8TDN2 545 aa14.21□□□□□ -0.13
CCDC113-205ENST00000569374 PRDM2Q13029 1718 aa14.18□□□□□ -0.14
CCDC113-205ENST00000569374 CADPSQ9ULU8 1353 aa14.18□□□□□ -0.14
CCDC113-205ENST00000569374 IFNL1Q8IU54 200 aa14.17□□□□□ -0.14
CCDC113-205ENST00000569374 WDR62O43379 1518 aa14.15□□□□□ -0.14
CCDC113-205ENST00000569374 MAP3K13O43283 966 aa14.14□□□□□ -0.15
CCDC113-205ENST00000569374 EFCAB3Q8N7B9 438 aa14.14□□□□□ -0.15
CCDC113-205ENST00000569374 KIF12Q96FN5 646 aa14.14□□□□□ -0.15
CCDC113-205ENST00000569374 CABP2Q9NPB3 220 aa14.14□□□□□ -0.15
CCDC113-205ENST00000569374 MRC2Q9UBG0 1479 aa14.13□□□□□ -0.15
CCDC113-205ENST00000569374 PDS5BQ9NTI5 1447 aa14.13□□□□□ -0.15
CCDC113-205ENST00000569374 ARHGEF1Q92888 912 aaKnown RBP14.12□□□□□ -0.15
CCDC113-205ENST00000569374 CFTRP13569 1480 aa14.11□□□□□ -0.15
CCDC113-205ENST00000569374 FANCD2Q9BXW9 1451 aa14.11□□□□□ -0.15
CCDC113-205ENST00000569374 LMOD2Q6P5Q4 547 aa14.1□□□□□ -0.15
CCDC113-205ENST00000569374 FBXO22Q8NEZ5 403 aa14.1□□□□□ -0.15
CCDC113-205ENST00000569374 E2F4Q16254 413 aa14.09□□□□□ -0.15
CCDC113-205ENST00000569374 CEP164Q9UPV0 1460 aa14.09□□□□□ -0.15
CCDC113-205ENST00000569374 CHRDL2Q6WN34 429 aa14.08□□□□□ -0.16
CCDC113-205ENST00000569374 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms