RNA–Protein interactions for RNA: ENST00000569357.4

TCF4-243, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-243ENST00000569357 FAM69CQ0P6D2 419 aa16.84■□□□□ 0.29
TCF4-243ENST00000569357 CEP170Q5SW79 1584 aa16.82■□□□□ 0.28
TCF4-243ENST00000569357 GRIN2AQ12879 1464 aa16.81■□□□□ 0.28
TCF4-243ENST00000569357 KIF13AQ9H1H9 1805 aa16.8■□□□□ 0.28
TCF4-243ENST00000569357 NPM1P06748 294 aaKnown RBP eCLIP16.78■□□□□ 0.28
TCF4-243ENST00000569357 NUP160Q12769 1436 aa16.75■□□□□ 0.27
TCF4-243ENST00000569357 ABCA10Q8WWZ4 1543 aa16.75■□□□□ 0.27
TCF4-243ENST00000569357 ABCA5Q8WWZ7 1642 aa16.74■□□□□ 0.27
TCF4-243ENST00000569357 PRG4Q92954 1404 aaPredicted RBP16.72■□□□□ 0.27
TCF4-243ENST00000569357 ABCC10Q5T3U5 1492 aa16.71■□□□□ 0.27
TCF4-243ENST00000569357 ADAMTS12P58397 1594 aa16.68■□□□□ 0.26
TCF4-243ENST00000569357 SHROOM2Q13796 1616 aa16.68■□□□□ 0.26
TCF4-243ENST00000569357 JPH4Q96JJ6 628 aa16.68■□□□□ 0.26
TCF4-243ENST00000569357 KDM6BO15054 1643 aa16.67■□□□□ 0.26
TCF4-243ENST00000569357 FHAD1B1AJZ9 1412 aa16.66■□□□□ 0.26
TCF4-243ENST00000569357 DCAF8L1A6NGE4 600 aa16.63■□□□□ 0.25
TCF4-243ENST00000569357 WRNQ14191 1432 aaPredicted RBP eCLIP16.62■□□□□ 0.25
TCF4-243ENST00000569357 DIP2BQ9P265 1576 aa16.62■□□□□ 0.25
TCF4-243ENST00000569357 MAPKBP1O60336 1514 aa16.6■□□□□ 0.25
TCF4-243ENST00000569357 TSPOAP1O95153 1857 aa16.57■□□□□ 0.24
TCF4-243ENST00000569357 ADGRL1O94910 1474 aa16.53■□□□□ 0.24
TCF4-243ENST00000569357 TTBK1Q5TCY1 1321 aaPredicted RBP16.52■□□□□ 0.24
TCF4-243ENST00000569357 ADCY10Q96PN6 1610 aa16.52■□□□□ 0.23
TCF4-243ENST00000569357 ERICH3Q5RHP9 1530 aa16.51■□□□□ 0.23
TCF4-243ENST00000569357 RNF39Q9H2S5 420 aa16.47■□□□□ 0.23
TCF4-243ENST00000569357 HECW2Q9P2P5 1572 aa16.47■□□□□ 0.23
TCF4-243ENST00000569357 RUSC2Q8N2Y8 1516 aa16.45■□□□□ 0.22
TCF4-243ENST00000569357 TOP2BQ02880 1626 aa16.41■□□□□ 0.22
TCF4-243ENST00000569357 PTPRGP23470 1445 aa16.39■□□□□ 0.21
TCF4-243ENST00000569357 BIVM-ERCC5R4GMW8 1640 aa16.39■□□□□ 0.21
TCF4-243ENST00000569357 HOXD11P31277 338 aaPredicted RBP16.38■□□□□ 0.21
TCF4-243ENST00000569357 FBXO41Q8TF61 875 aa16.38■□□□□ 0.21
TCF4-243ENST00000569357 ASXL2Q76L83 1435 aa16.36■□□□□ 0.21
TCF4-243ENST00000569357 KIAA0586Q9BVV6 1533 aa16.35■□□□□ 0.21
TCF4-243ENST00000569357 COL17A1Q9UMD9 1497 aaPredicted RBP16.35■□□□□ 0.21
TCF4-243ENST00000569357 SUPT5HO00267 1087 aaKnown RBP16.34■□□□□ 0.21
TCF4-243ENST00000569357 PPP4R3CPQ6ZMV5 832 aa16.33■□□□□ 0.2
TCF4-243ENST00000569357 PLB1Q6P1J6 1458 aa16.33■□□□□ 0.2
TCF4-243ENST00000569357 ABCC2Q92887 1545 aa16.32■□□□□ 0.2
TCF4-243ENST00000569357 PPRC1Q5VV67 1664 aaKnown RBP16.3■□□□□ 0.2
TCF4-243ENST00000569357 GLI2P10070 1586 aa16.29■□□□□ 0.2
TCF4-243ENST00000569357 TNIKQ9UKE5 1360 aa16.27■□□□□ 0.2
TCF4-243ENST00000569357 CARMIL2Q6F5E8 1435 aa16.27■□□□□ 0.19
TCF4-243ENST00000569357 TEX14Q8IWB6 1497 aa16.25■□□□□ 0.19
TCF4-243ENST00000569357 CUL7Q14999 1698 aa16.23■□□□□ 0.19
TCF4-243ENST00000569357 EPRSP07814 1512 aaKnown RBP16.23■□□□□ 0.19
TCF4-243ENST00000569357 IGF1RP08069 1367 aa16.23■□□□□ 0.19
TCF4-243ENST00000569357 UACAQ9BZF9 1416 aa16.2■□□□□ 0.18
TCF4-243ENST00000569357 UHRF1BP1LA0JNW5 1464 aa16.18■□□□□ 0.18
TCF4-243ENST00000569357 MAP3K4Q9Y6R4 1608 aa16.18■□□□□ 0.18
TCF4-243ENST00000569357 KIF27Q86VH2 1401 aa16.17■□□□□ 0.18
TCF4-243ENST00000569357 LMTK3Q96Q04 1460 aa16.15■□□□□ 0.18
TCF4-243ENST00000569357 CARMIL1Q5VZK9 1371 aa16.13■□□□□ 0.17
TCF4-243ENST00000569357 C1QBPQ07021 282 aaKnown RBP16.13■□□□□ 0.17
TCF4-243ENST00000569357 KCNH8Q96L42 1107 aa16.13■□□□□ 0.17
TCF4-243ENST00000569357 KDM5BQ9UGL1 1544 aa16.13■□□□□ 0.17
TCF4-243ENST00000569357 CNKSR2Q8WXI2 1034 aa16.1■□□□□ 0.17
TCF4-243ENST00000569357 RNF216Q9NWF9 866 aaPredicted RBP16.1■□□□□ 0.17
TCF4-243ENST00000569357 IQGAP2Q13576 1575 aa16.09■□□□□ 0.17
TCF4-243ENST00000569357 CD109Q6YHK3 1445 aa16.09■□□□□ 0.17
TCF4-243ENST00000569357 ZCCHC11Q5TAX3 1644 aaKnown RBP16.08■□□□□ 0.17
TCF4-243ENST00000569357 WDR7Q9Y4E6 1490 aa16.08■□□□□ 0.16
TCF4-243ENST00000569357 DISP1Q96F81 1524 aa16.07■□□□□ 0.16
TCF4-243ENST00000569357 KIF21BO75037 1637 aa16.07■□□□□ 0.16
TCF4-243ENST00000569357 PTPRMP28827 1452 aa16.03■□□□□ 0.16
TCF4-243ENST00000569357 MAGI3Q5TCQ9 1506 aa16.02■□□□□ 0.15
TCF4-243ENST00000569357 ARID4BQ4LE39 1312 aaPredicted RBP16■□□□□ 0.15
TCF4-243ENST00000569357 DISP3Q9P2K9 1392 aa16■□□□□ 0.15
TCF4-243ENST00000569357 ILDR2Q71H61 639 aa15.99■□□□□ 0.15
TCF4-243ENST00000569357 SOCS7O14512 581 aa15.97■□□□□ 0.15
TCF4-243ENST00000569357 HSPA2P54652 639 aa15.97■□□□□ 0.15
TCF4-243ENST00000569357 CFAP43Q8NDM7 1665 aa15.96■□□□□ 0.15
TCF4-243ENST00000569357 PCF11O94913 1555 aaKnown RBP15.96■□□□□ 0.14
TCF4-243ENST00000569357 UGGT2Q9NYU1 1516 aa15.95■□□□□ 0.14
TCF4-243ENST00000569357 KIAA0556O60303 1618 aa15.95■□□□□ 0.14
TCF4-243ENST00000569357 ARID3CA6NKF2 412 aa15.95■□□□□ 0.14
TCF4-243ENST00000569357 CERKQ8TCT0 537 aa15.95■□□□□ 0.14
TCF4-243ENST00000569357 RAPGEF3O95398 923 aa15.93■□□□□ 0.14
TCF4-243ENST00000569357 ADAMTSL3P82987 1691 aa15.92■□□□□ 0.14
TCF4-243ENST00000569357 ARAP3Q8WWN8 1544 aa15.91■□□□□ 0.14
TCF4-243ENST00000569357 RAPGEF2Q9Y4G8 1499 aa15.89■□□□□ 0.13
TCF4-243ENST00000569357 MADDQ8WXG6 1647 aa15.88■□□□□ 0.13
TCF4-243ENST00000569357 FAM9AQ8IZU1 332 aaPredicted RBP15.84■□□□□ 0.13
TCF4-243ENST00000569357 BCORL1Q5H9F3 1711 aa15.84■□□□□ 0.13
TCF4-243ENST00000569357 PHLDB1Q86UU1 1377 aa15.84■□□□□ 0.13
TCF4-243ENST00000569357 ABCA8O94911 1581 aa15.83■□□□□ 0.12
TCF4-243ENST00000569357 GOLGA3Q08378 1498 aa15.82■□□□□ 0.12
TCF4-243ENST00000569357 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.81■□□□□ 0.12
TCF4-243ENST00000569357 HNRNPUL2Q1KMD3 747 aaKnown RBP15.81■□□□□ 0.12
TCF4-243ENST00000569357 RIMS1Q86UR5 1692 aaKnown RBP15.8■□□□□ 0.12
TCF4-243ENST00000569357 P3H3Q8IVL6 736 aa15.79■□□□□ 0.12
TCF4-243ENST00000569357 MLECQ14165 292 aa15.78■□□□□ 0.12
TCF4-243ENST00000569357 ATP10BO94823 1461 aa15.76■□□□□ 0.11
TCF4-243ENST00000569357 NEO1Q92859 1461 aa15.76■□□□□ 0.11
TCF4-243ENST00000569357 ABCA9Q8IUA7 1624 aa15.73■□□□□ 0.11
TCF4-243ENST00000569357 POGZQ7Z3K3 1410 aa15.73■□□□□ 0.11
TCF4-243ENST00000569357 FRMPD1Q5SYB0 1578 aa15.71■□□□□ 0.11
TCF4-243ENST00000569357 SPATA31D1Q6ZQQ2 1576 aa15.71■□□□□ 0.11
TCF4-243ENST00000569357 CTTNBP2Q8WZ74 1663 aa15.7■□□□□ 0.1
TCF4-243ENST00000569357 DENND4BO75064 1496 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms