RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 PLEKHG5O94827 1062 aa11.42□□□□□ -0.58
CDH13-211ENST00000568770 CHRDL2Q6WN34 429 aa11.42□□□□□ -0.58
CDH13-211ENST00000568770 FXR2P51116 673 aaKnown RBP eCLIP11.4□□□□□ -0.58
CDH13-211ENST00000568770 NCAPD3P42695 1498 aa11.39□□□□□ -0.59
CDH13-211ENST00000568770 PKD2Q13563 968 aa11.39□□□□□ -0.59
CDH13-211ENST00000568770 ZBTB47Q9UFB7 747 aaPredicted RBP11.37□□□□□ -0.59
CDH13-211ENST00000568770 NUBP1P53384 320 aa11.36□□□□□ -0.59
CDH13-211ENST00000568770 PRKAR2AP13861 404 aaKnown RBP11.35□□□□□ -0.59
CDH13-211ENST00000568770 PIP4P2Q8N4L2 257 aa11.35□□□□□ -0.59
CDH13-211ENST00000568770 NESP48681 1621 aa11.34□□□□□ -0.59
CDH13-211ENST00000568770 ATAD2BQ9ULI0 1458 aa11.33□□□□□ -0.6
CDH13-211ENST00000568770 HMGXB3Q12766 1538 aa11.3□□□□□ -0.6
CDH13-211ENST00000568770 SMARCA4P51532 1647 aa11.3□□□□□ -0.6
CDH13-211ENST00000568770 SMARCA2P51531 1590 aa11.29□□□□□ -0.6
CDH13-211ENST00000568770 THOC2Q8NI27 1593 aaKnown RBP11.29□□□□□ -0.6
CDH13-211ENST00000568770 FARP1Q9Y4F1 1045 aaPredicted RBP11.29□□□□□ -0.6
CDH13-211ENST00000568770 RASEFQ8IZ41 740 aa11.28□□□□□ -0.6
CDH13-211ENST00000568770 CIZ1Q9ULV3 898 aaPredicted RBP11.28□□□□□ -0.6
CDH13-211ENST00000568770 KIF21AQ7Z4S6 1674 aa11.25□□□□□ -0.61
CDH13-211ENST00000568770 DCAF8Q5TAQ9 597 aa11.23□□□□□ -0.61
CDH13-211ENST00000568770 ECM2O94769 699 aaPredicted RBP11.22□□□□□ -0.61
CDH13-211ENST00000568770 NPM1P06748 294 aaKnown RBP eCLIP11.22□□□□□ -0.61
CDH13-211ENST00000568770 BAZ1BQ9UIG0 1483 aaKnown RBP11.22□□□□□ -0.61
CDH13-211ENST00000568770 LAMC3Q9Y6N6 1575 aa11.22□□□□□ -0.61
CDH13-211ENST00000568770 TRIM41Q8WV44 630 aa11.19□□□□□ -0.62
CDH13-211ENST00000568770 PEG3Q9GZU2 1588 aa11.18□□□□□ -0.62
CDH13-211ENST00000568770 BAZ1AQ9NRL2 1556 aaPredicted RBP11.18□□□□□ -0.62
CDH13-211ENST00000568770 RGL2O15211 777 aa11.17□□□□□ -0.62
CDH13-211ENST00000568770 GSE1Q14687 1217 aa11.17□□□□□ -0.62
CDH13-211ENST00000568770 FAM212AQ96EL1 285 aa11.16□□□□□ -0.62
CDH13-211ENST00000568770 TSPYL2Q9H2G4 693 aaPredicted RBP11.15□□□□□ -0.62
CDH13-211ENST00000568770 PDS5BQ9NTI5 1447 aa11.12□□□□□ -0.63
CDH13-211ENST00000568770 RNF25Q96BH1 459 aaPredicted RBP11.1□□□□□ -0.63
CDH13-211ENST00000568770 PYGBP11216 843 aa11.09□□□□□ -0.63
CDH13-211ENST00000568770 MROH2BQ7Z745 1585 aa11.08□□□□□ -0.64
CDH13-211ENST00000568770 MRC2Q9UBG0 1479 aa11.06□□□□□ -0.64
CDH13-211ENST00000568770 WDR62O43379 1518 aa11.05□□□□□ -0.64
CDH13-211ENST00000568770 CCDC61Q9Y6R9 512 aa11.05□□□□□ -0.64
CDH13-211ENST00000568770 CHRM1P11229 460 aaPredicted RBP11.04□□□□□ -0.64
CDH13-211ENST00000568770 CADPSQ9ULU8 1353 aa11.03□□□□□ -0.64
CDH13-211ENST00000568770 CD44P16070 742 aaKnown RBP11.01□□□□□ -0.65
CDH13-211ENST00000568770 WIZO95785 1651 aa10.99□□□□□ -0.65
CDH13-211ENST00000568770 C19orf67A6NJJ6 358 aa10.99□□□□□ -0.65
CDH13-211ENST00000568770 ZRANB1Q9UGI0 708 aa10.99□□□□□ -0.65
CDH13-211ENST00000568770 CEP164Q9UPV0 1460 aa10.96□□□□□ -0.65
CDH13-211ENST00000568770 RIOK3O14730 519 aaKnown RBP10.96□□□□□ -0.65
CDH13-211ENST00000568770 PAK3O75914 559 aaPredicted RBP10.96□□□□□ -0.65
CDH13-211ENST00000568770 EVX2Q03828 476 aa10.96□□□□□ -0.65
CDH13-211ENST00000568770 PHF12Q96QT6 1004 aa10.95□□□□□ -0.66
CDH13-211ENST00000568770 KIF12Q96FN5 646 aa10.94□□□□□ -0.66
CDH13-211ENST00000568770 MAP3K13O43283 966 aa10.93□□□□□ -0.66
CDH13-211ENST00000568770 CHGAP10645 457 aaKnown RBP10.93□□□□□ -0.66
CDH13-211ENST00000568770 PCDHB8Q9UN66 801 aa10.93□□□□□ -0.66
CDH13-211ENST00000568770 PCDHB13Q9Y5F0 798 aa10.93□□□□□ -0.66
CDH13-211ENST00000568770 FANCD2Q9BXW9 1451 aa10.93□□□□□ -0.66
CDH13-211ENST00000568770 HAX1O00165 279 aa10.9□□□□□ -0.66
CDH13-211ENST00000568770 RIMBP3CA6NJZ7 1639 aa10.89□□□□□ -0.67
CDH13-211ENST00000568770 RIMBP3BA6NNM3 1639 aa10.89□□□□□ -0.67
CDH13-211ENST00000568770 RIMBP3Q9UFD9 1639 aa10.89□□□□□ -0.67
CDH13-211ENST00000568770 VGFO15240 615 aaPredicted RBP10.88□□□□□ -0.67
CDH13-211ENST00000568770 POTEHQ6S545 545 aa10.88□□□□□ -0.67
CDH13-211ENST00000568770 IFNL1Q8IU54 200 aa10.88□□□□□ -0.67
CDH13-211ENST00000568770 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.87□□□□□ -0.67
CDH13-211ENST00000568770 ZNF579Q8NAF0 562 aaKnown RBP10.87□□□□□ -0.67
CDH13-211ENST00000568770 ZFP91Q96JP5 570 aaPredicted RBP10.87□□□□□ -0.67
CDH13-211ENST00000568770 PRDM2Q13029 1718 aa10.87□□□□□ -0.67
CDH13-211ENST00000568770 URB2Q14146 1524 aaKnown RBP10.86□□□□□ -0.67
CDH13-211ENST00000568770 CFTRP13569 1480 aa10.86□□□□□ -0.67
CDH13-211ENST00000568770 ZNF467Q7Z7K2 595 aaPredicted RBP10.85□□□□□ -0.67
CDH13-211ENST00000568770 HS6ST3Q8IZP7 471 aa10.85□□□□□ -0.67
CDH13-211ENST00000568770 BBXQ8WY36 941 aaPredicted RBP10.84□□□□□ -0.67
CDH13-211ENST00000568770 SGIP1Q9BQI5 828 aa10.84□□□□□ -0.67
CDH13-211ENST00000568770 STK25O00506 426 aa10.82□□□□□ -0.68
CDH13-211ENST00000568770 MS4A3Q96HJ5 214 aa10.81□□□□□ -0.68
CDH13-211ENST00000568770 TRPC6Q9Y210 931 aa10.81□□□□□ -0.68
CDH13-211ENST00000568770 PLCB2Q00722 1185 aa10.8□□□□□ -0.68
CDH13-211ENST00000568770 NKX1-1Q15270 411 aaPredicted RBP10.8□□□□□ -0.68
CDH13-211ENST00000568770 BCL11BQ9C0K0 894 aaPredicted RBP10.8□□□□□ -0.68
CDH13-211ENST00000568770 TAOK2Q9UL54 1235 aa10.8□□□□□ -0.68
CDH13-211ENST00000568770 ARHGEF11O15085 1522 aa10.79□□□□□ -0.68
CDH13-211ENST00000568770 PSEN1P49768 467 aa10.79□□□□□ -0.68
CDH13-211ENST00000568770 PDAP1Q13442 181 aaKnown RBP10.79□□□□□ -0.68
CDH13-211ENST00000568770 STK24Q9Y6E0 443 aa10.79□□□□□ -0.68
CDH13-211ENST00000568770 TOP2AP11388 1531 aaKnown RBP10.78□□□□□ -0.68
CDH13-211ENST00000568770 ZNF608Q9ULD9 1512 aaPredicted RBP10.77□□□□□ -0.69
CDH13-211ENST00000568770 CHD1O14646 1710 aa10.75□□□□□ -0.69
CDH13-211ENST00000568770 GALR2O43603 387 aaPredicted RBP10.75□□□□□ -0.69
CDH13-211ENST00000568770 SLC24A1O60721 1099 aa10.75□□□□□ -0.69
CDH13-211ENST00000568770 PAXIP1Q6ZW49 1069 aaPredicted RBP10.75□□□□□ -0.69
CDH13-211ENST00000568770 RSF1Q96T23 1441 aaPredicted RBP10.74□□□□□ -0.69
CDH13-211ENST00000568770 IFT140Q96RY7 1462 aa10.74□□□□□ -0.69
CDH13-211ENST00000568770 EIF4G3O43432 1585 aaKnown RBP10.73□□□□□ -0.69
CDH13-211ENST00000568770 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.73□□□□□ -0.69
CDH13-211ENST00000568770 CFAP44Q96MT7 982 aa10.72□□□□□ -0.69
CDH13-211ENST00000568770 CYB5RLQ6IPT4 315 aa10.71□□□□□ -0.69
CDH13-211ENST00000568770 TOPBP1Q92547 1522 aa10.69□□□□□ -0.7
CDH13-211ENST00000568770 SPRYD3Q8NCJ5 442 aa10.69□□□□□ -0.7
CDH13-211ENST00000568770 GTPBP6O43824 516 aaPredicted RBP10.68□□□□□ -0.7
CDH13-211ENST00000568770 TMEM106CQ9BVX2 250 aa10.67□□□□□ -0.7
CDH13-211ENST00000568770 CABP2Q9NPB3 220 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms