RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 KIF13AQ9H1H9 1805 aa27.84■■■□□ 2.05
HERPUD1-215ENST00000568676 NPM1P06748 294 aaKnown RBP eCLIP27.83■■■□□ 2.05
HERPUD1-215ENST00000568676 MAPKBP1O60336 1514 aa27.79■■■□□ 2.04
HERPUD1-215ENST00000568676 KIAA0586Q9BVV6 1533 aa27.79■■■□□ 2.04
HERPUD1-215ENST00000568676 ABCC10Q5T3U5 1492 aa27.77■■■□□ 2.04
HERPUD1-215ENST00000568676 KIF27Q86VH2 1401 aa27.77■■■□□ 2.04
HERPUD1-215ENST00000568676 CUL7Q14999 1698 aa27.76■■■□□ 2.03
HERPUD1-215ENST00000568676 IGF1RP08069 1367 aa27.74■■■□□ 2.03
HERPUD1-215ENST00000568676 FAM69CQ0P6D2 419 aa27.72■■■□□ 2.03
HERPUD1-215ENST00000568676 ADCY10Q96PN6 1610 aa27.69■■■□□ 2.02
HERPUD1-215ENST00000568676 DIP2BQ9P265 1576 aa27.66■■■□□ 2.02
HERPUD1-215ENST00000568676 CARMIL1Q5VZK9 1371 aa27.57■■■□□ 2
HERPUD1-215ENST00000568676 PTPRGP23470 1445 aa27.56■■■□□ 2
HERPUD1-215ENST00000568676 CARMIL2Q6F5E8 1435 aa27.56■■■□□ 2
HERPUD1-215ENST00000568676 TNIKQ9UKE5 1360 aa27.5■■□□□ 1.99
HERPUD1-215ENST00000568676 KDM6BO15054 1643 aa27.5■■□□□ 1.99
HERPUD1-215ENST00000568676 ABCC2Q92887 1545 aa27.46■■□□□ 1.99
HERPUD1-215ENST00000568676 IQGAP2Q13576 1575 aa27.45■■□□□ 1.99
HERPUD1-215ENST00000568676 UHRF1BP1LA0JNW5 1464 aa27.41■■□□□ 1.98
HERPUD1-215ENST00000568676 PLB1Q6P1J6 1458 aa27.41■■□□□ 1.98
HERPUD1-215ENST00000568676 TSPOAP1O95153 1857 aa27.38■■□□□ 1.97
HERPUD1-215ENST00000568676 GLI2P10070 1586 aa27.36■■□□□ 1.97
HERPUD1-215ENST00000568676 ASXL2Q76L83 1435 aa27.35■■□□□ 1.97
HERPUD1-215ENST00000568676 UACAQ9BZF9 1416 aa27.34■■□□□ 1.97
HERPUD1-215ENST00000568676 TTBK1Q5TCY1 1321 aaPredicted RBP27.34■■□□□ 1.97
HERPUD1-215ENST00000568676 DISP1Q96F81 1524 aa27.31■■□□□ 1.96
HERPUD1-215ENST00000568676 RAPGEF2Q9Y4G8 1499 aa27.31■■□□□ 1.96
HERPUD1-215ENST00000568676 UGGT2Q9NYU1 1516 aa27.29■■□□□ 1.96
HERPUD1-215ENST00000568676 KDM4FA0A1W2PPD8 638 aa27.27■■□□□ 1.96
HERPUD1-215ENST00000568676 KDM5BQ9UGL1 1544 aa27.26■■□□□ 1.96
HERPUD1-215ENST00000568676 PPRC1Q5VV67 1664 aaKnown RBP27.22■■□□□ 1.95
HERPUD1-215ENST00000568676 EPRSP07814 1512 aaKnown RBP27.2■■□□□ 1.94
HERPUD1-215ENST00000568676 KIAA0556O60303 1618 aa27.19■■□□□ 1.94
HERPUD1-215ENST00000568676 TEX14Q8IWB6 1497 aa27.18■■□□□ 1.94
HERPUD1-215ENST00000568676 MAP3K4Q9Y6R4 1608 aa27.16■■□□□ 1.94
HERPUD1-215ENST00000568676 ZCCHC11Q5TAX3 1644 aaKnown RBP27.14■■□□□ 1.94
HERPUD1-215ENST00000568676 GOLGA3Q08378 1498 aa27.1■■□□□ 1.93
HERPUD1-215ENST00000568676 WDR7Q9Y4E6 1490 aa27.07■■□□□ 1.92
HERPUD1-215ENST00000568676 CTTNBP2Q8WZ74 1663 aa27.06■■□□□ 1.92
HERPUD1-215ENST00000568676 COL17A1Q9UMD9 1497 aaPredicted RBP27.05■■□□□ 1.92
HERPUD1-215ENST00000568676 ADGRL1O94910 1474 aa27.04■■□□□ 1.92
HERPUD1-215ENST00000568676 ABCA8O94911 1581 aa26.97■■□□□ 1.91
HERPUD1-215ENST00000568676 PRXQ9BXM0 1461 aa26.96■■□□□ 1.91
HERPUD1-215ENST00000568676 MAGI3Q5TCQ9 1506 aa26.95■■□□□ 1.91
HERPUD1-215ENST00000568676 FAM9AQ8IZU1 332 aaPredicted RBP26.94■■□□□ 1.9
HERPUD1-215ENST00000568676 CFAP43Q8NDM7 1665 aa26.94■■□□□ 1.9
HERPUD1-215ENST00000568676 CD109Q6YHK3 1445 aa26.93■■□□□ 1.9
HERPUD1-215ENST00000568676 KCNH8Q96L42 1107 aa26.85■■□□□ 1.89
HERPUD1-215ENST00000568676 ARAP3Q8WWN8 1544 aa26.75■■□□□ 1.87
HERPUD1-215ENST00000568676 PHLDB1Q86UU1 1377 aa26.75■■□□□ 1.87
HERPUD1-215ENST00000568676 HECW2Q9P2P5 1572 aa26.73■■□□□ 1.87
HERPUD1-215ENST00000568676 ATP10BO94823 1461 aa26.73■■□□□ 1.87
HERPUD1-215ENST00000568676 ILDR1Q86SU0 546 aaPredicted RBP26.69■■□□□ 1.86
HERPUD1-215ENST00000568676 SAMD9Q5K651 1589 aa26.68■■□□□ 1.86
HERPUD1-215ENST00000568676 ABCA9Q8IUA7 1624 aa26.68■■□□□ 1.86
HERPUD1-215ENST00000568676 CSRNP3Q8WYN3 585 aa26.67■■□□□ 1.86
HERPUD1-215ENST00000568676 P3H3Q8IVL6 736 aa26.66■■□□□ 1.86
HERPUD1-215ENST00000568676 RAPGEF6Q8TEU7 1601 aa26.63■■□□□ 1.85
HERPUD1-215ENST00000568676 NEO1Q92859 1461 aa26.62■■□□□ 1.85
HERPUD1-215ENST00000568676 KIF21BO75037 1637 aa26.61■■□□□ 1.85
HERPUD1-215ENST00000568676 ARID3CA6NKF2 412 aa26.61■■□□□ 1.85
HERPUD1-215ENST00000568676 EEA1Q15075 1411 aa26.61■■□□□ 1.85
HERPUD1-215ENST00000568676 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.54■■□□□ 1.84
HERPUD1-215ENST00000568676 HNRNPUL2Q1KMD3 747 aaKnown RBP26.54■■□□□ 1.84
HERPUD1-215ENST00000568676 NUP153P49790 1475 aaKnown RBP26.52■■□□□ 1.84
HERPUD1-215ENST00000568676 RAPGEF3O95398 923 aa26.49■■□□□ 1.83
HERPUD1-215ENST00000568676 ADAMTSL3P82987 1691 aa26.47■■□□□ 1.83
HERPUD1-215ENST00000568676 PTPRMP28827 1452 aa26.45■■□□□ 1.82
HERPUD1-215ENST00000568676 PLEKHD1A6NEE1 506 aa26.45■■□□□ 1.82
HERPUD1-215ENST00000568676 FHOD3Q2V2M9 1422 aa26.43■■□□□ 1.82
HERPUD1-215ENST00000568676 EFCAB5A4FU69 1503 aa26.43■■□□□ 1.82
HERPUD1-215ENST00000568676 FRMPD1Q5SYB0 1578 aa26.42■■□□□ 1.82
HERPUD1-215ENST00000568676 CFAP74Q9C0B2 1584 aa26.41■■□□□ 1.82
HERPUD1-215ENST00000568676 DENND4BO75064 1496 aaPredicted RBP26.39■■□□□ 1.82
HERPUD1-215ENST00000568676 BCORL1Q5H9F3 1711 aa26.39■■□□□ 1.81
HERPUD1-215ENST00000568676 ARID4BQ4LE39 1312 aaPredicted RBP26.37■■□□□ 1.81
HERPUD1-215ENST00000568676 ARHGEF40Q8TER5 1519 aa26.36■■□□□ 1.81
HERPUD1-215ENST00000568676 AKNAQ7Z591 1439 aa26.36■■□□□ 1.81
HERPUD1-215ENST00000568676 FANCAO15360 1455 aa26.36■■□□□ 1.81
HERPUD1-215ENST00000568676 RANGAP1P46060 587 aaPredicted RBP26.35■■□□□ 1.81
HERPUD1-215ENST00000568676 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.33■■□□□ 1.816e-6■■■■□ 21.5
HERPUD1-215ENST00000568676 RICTORQ6R327 1708 aa26.32■■□□□ 1.8
HERPUD1-215ENST00000568676 MADDQ8WXG6 1647 aa26.31■■□□□ 1.8
HERPUD1-215ENST00000568676 ZMYM4Q5VZL5 1548 aa26.29■■□□□ 1.8
HERPUD1-215ENST00000568676 POGZQ7Z3K3 1410 aa26.29■■□□□ 1.8
HERPUD1-215ENST00000568676 MAGI2Q86UL8 1455 aa26.28■■□□□ 1.8
HERPUD1-215ENST00000568676 FBXO41Q8TF61 875 aa26.27■■□□□ 1.8
HERPUD1-215ENST00000568676 PCF11O94913 1555 aaKnown RBP26.27■■□□□ 1.8
HERPUD1-215ENST00000568676 TTC37Q6PGP7 1564 aa26.25■■□□□ 1.79
HERPUD1-215ENST00000568676 ZFYVE16Q7Z3T8 1539 aa26.23■■□□□ 1.79
HERPUD1-215ENST00000568676 LMTK3Q96Q04 1460 aa26.22■■□□□ 1.79
HERPUD1-215ENST00000568676 PLCH2O75038 1416 aa26.21■■□□□ 1.79
HERPUD1-215ENST00000568676 FMN1Q68DA7 1419 aa26.21■■□□□ 1.79
HERPUD1-215ENST00000568676 RIMS1Q86UR5 1692 aaKnown RBP26.19■■□□□ 1.78
HERPUD1-215ENST00000568676 CDK13Q14004 1512 aaKnown RBP26.18■■□□□ 1.78
HERPUD1-215ENST00000568676 CDK11AQ9UQ88 783 aaPredicted RBP26.16■■□□□ 1.78
HERPUD1-215ENST00000568676 HECW1Q76N89 1606 aa26.15■■□□□ 1.78
HERPUD1-215ENST00000568676 SCAPERQ9BY12 1400 aa26.14■■□□□ 1.78
HERPUD1-215ENST00000568676 YEATS2Q9ULM3 1422 aa26.14■■□□□ 1.78
HERPUD1-215ENST00000568676 UBTFP17480 764 aaKnown RBP26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms