RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 GRIN2BQ13224 1484 aa26.9■■□□□ 1.9
CMTM3-214ENST00000567572 TTBK1Q5TCY1 1321 aaPredicted RBP26.9■■□□□ 1.9
CMTM3-214ENST00000567572 ZNF608Q9ULD9 1512 aaPredicted RBP26.9■■□□□ 1.9
CMTM3-214ENST00000567572 ADAMTS12P58397 1594 aa26.9■■□□□ 1.9
CMTM3-214ENST00000567572 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.89■■□□□ 1.9
CMTM3-214ENST00000567572 EFCAB5A4FU69 1503 aa26.88■■□□□ 1.89
CMTM3-214ENST00000567572 APLP2Q06481 763 aa26.88■■□□□ 1.89
CMTM3-214ENST00000567572 FHAD1B1AJZ9 1412 aa26.88■■□□□ 1.89
CMTM3-214ENST00000567572 EIF4G3O43432 1585 aaKnown RBP26.83■■□□□ 1.89
CMTM3-214ENST00000567572 SAMD9Q5K651 1589 aa26.76■■□□□ 1.87
CMTM3-214ENST00000567572 MAP3K1Q13233 1512 aa26.73■■□□□ 1.87
CMTM3-214ENST00000567572 FHOD3Q2V2M9 1422 aa26.72■■□□□ 1.87
CMTM3-214ENST00000567572 SNAPC4Q5SXM2 1469 aa26.7■■□□□ 1.87
CMTM3-214ENST00000567572 PCF11O94913 1555 aaKnown RBP26.7■■□□□ 1.87
CMTM3-214ENST00000567572 TIAM1Q13009 1591 aa26.68■■□□□ 1.86
CMTM3-214ENST00000567572 KANK4Q5T7N3 995 aaPredicted RBP26.67■■□□□ 1.86
CMTM3-214ENST00000567572 P3H3Q8IVL6 736 aa26.65■■□□□ 1.86
CMTM3-214ENST00000567572 MAGI1Q96QZ7 1491 aaPredicted RBP26.65■■□□□ 1.86
CMTM3-214ENST00000567572 IQGAP2Q13576 1575 aa26.65■■□□□ 1.86
CMTM3-214ENST00000567572 FYCO1Q9BQS8 1478 aa26.64■■□□□ 1.86
CMTM3-214ENST00000567572 CFAP43Q8NDM7 1665 aa26.63■■□□□ 1.85
CMTM3-214ENST00000567572 FMN1Q68DA7 1419 aa26.61■■□□□ 1.85
CMTM3-214ENST00000567572 CASKIN1Q8WXD9 1431 aa26.61■■□□□ 1.85
CMTM3-214ENST00000567572 GRIN2AQ12879 1464 aa26.6■■□□□ 1.85
CMTM3-214ENST00000567572 SYNJ2O15056 1496 aa26.55■■□□□ 1.84
CMTM3-214ENST00000567572 LRRC9Q6ZRR7 1453 aa26.54■■□□□ 1.84
CMTM3-214ENST00000567572 UGGT2Q9NYU1 1516 aa26.53■■□□□ 1.84
CMTM3-214ENST00000567572 KIAA0586Q9BVV6 1533 aa26.53■■□□□ 1.84
CMTM3-214ENST00000567572 RRBP1Q9P2E9 1410 aaKnown RBP26.5■■□□□ 1.83
CMTM3-214ENST00000567572 CEP170Q5SW79 1584 aa26.44■■□□□ 1.82
CMTM3-214ENST00000567572 LRRIQ1Q96JM4 1722 aa26.42■■□□□ 1.82
CMTM3-214ENST00000567572 CHMP7Q8WUX9 453 aaPredicted RBP26.41■■□□□ 1.82
CMTM3-214ENST00000567572 CLSPNQ9HAW4 1339 aa26.4■■□□□ 1.82
CMTM3-214ENST00000567572 NUP160Q12769 1436 aa26.4■■□□□ 1.82
CMTM3-214ENST00000567572 HNRNPUL2Q1KMD3 747 aaKnown RBP26.39■■□□□ 1.82
CMTM3-214ENST00000567572 KIAA0556O60303 1618 aa26.39■■□□□ 1.82
CMTM3-214ENST00000567572 ATP1B4Q9UN42 357 aaPredicted RBP26.38■■□□□ 1.81
CMTM3-214ENST00000567572 DISP1Q96F81 1524 aa26.38■■□□□ 1.81
CMTM3-214ENST00000567572 DIEXFQ68CQ4 756 aaKnown RBP26.36■■□□□ 1.81
CMTM3-214ENST00000567572 CCNB3Q8WWL7 1395 aa26.36■■□□□ 1.81
CMTM3-214ENST00000567572 HECW1Q76N89 1606 aa26.33■■□□□ 1.81
CMTM3-214ENST00000567572 PHLDB1Q86UU1 1377 aa26.31■■□□□ 1.8
CMTM3-214ENST00000567572 ZNF316A6NFI3 1004 aaPredicted RBP26.31■■□□□ 1.8
CMTM3-214ENST00000567572 CCDC18Q5T9S5 1454 aa26.3■■□□□ 1.8
CMTM3-214ENST00000567572 FBLN2P98095 1184 aa26.28■■□□□ 1.8
CMTM3-214ENST00000567572 EHBP1L1Q8N3D4 1523 aa26.23■■□□□ 1.79
CMTM3-214ENST00000567572 MTUS2Q5JR59 1369 aa26.23■■□□□ 1.79
CMTM3-214ENST00000567572 EPRSP07814 1512 aaKnown RBP26.21■■□□□ 1.79
CMTM3-214ENST00000567572 MAGI3Q5TCQ9 1506 aa26.18■■□□□ 1.78
CMTM3-214ENST00000567572 CHD1O14646 1710 aa26.18■■□□□ 1.78
CMTM3-214ENST00000567572 SUPT6HQ7KZ85 1726 aaKnown RBP26.17■■□□□ 1.78
CMTM3-214ENST00000567572 RAPGEF6Q8TEU7 1601 aa26.16■■□□□ 1.78
CMTM3-214ENST00000567572 DHX57Q6P158 1386 aaKnown RBP26.16■■□□□ 1.78
CMTM3-214ENST00000567572 JPH4Q96JJ6 628 aa26.15■■□□□ 1.78
CMTM3-214ENST00000567572 CARMIL2Q6F5E8 1435 aa26.15■■□□□ 1.78
CMTM3-214ENST00000567572 CDK13Q14004 1512 aaKnown RBP26.14■■□□□ 1.77
CMTM3-214ENST00000567572 NCOA2Q15596 1464 aa26.14■■□□□ 1.77
CMTM3-214ENST00000567572 ARHGEF11O15085 1522 aa26.13■■□□□ 1.77
CMTM3-214ENST00000567572 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.13■■□□□ 1.77
CMTM3-214ENST00000567572 NUP153P49790 1475 aaKnown RBP26.12■■□□□ 1.77
CMTM3-214ENST00000567572 FGD6Q6ZV73 1430 aa26.1■■□□□ 1.77
CMTM3-214ENST00000567572 CENPBP07199 599 aaPredicted RBP26.08■■□□□ 1.77
CMTM3-214ENST00000567572 SCAF1Q9H7N4 1312 aaKnown RBP26.07■■□□□ 1.76
CMTM3-214ENST00000567572 ACIN1Q9UKV3 1341 aaKnown RBP26.07■■□□□ 1.76
CMTM3-214ENST00000567572 MYOM3Q5VTT5 1437 aa26.06■■□□□ 1.76
CMTM3-214ENST00000567572 FAM50AQ14320 339 aaKnown RBP26.03■■□□□ 1.76
CMTM3-214ENST00000567572 PLB1Q6P1J6 1458 aa26.02■■□□□ 1.76
CMTM3-214ENST00000567572 ITGAEP38570 1179 aa26.01■■□□□ 1.75
CMTM3-214ENST00000567572 SHROOM2Q13796 1616 aa26.01■■□□□ 1.75
CMTM3-214ENST00000567572 ABCA8O94911 1581 aa25.98■■□□□ 1.75
CMTM3-214ENST00000567572 PRG4Q92954 1404 aaPredicted RBP25.98■■□□□ 1.75
CMTM3-214ENST00000567572 ARID3CA6NKF2 412 aa25.94■■□□□ 1.74
CMTM3-214ENST00000567572 PTPN23Q9H3S7 1636 aa25.94■■□□□ 1.74
CMTM3-214ENST00000567572 TCOF1Q13428 1488 aaKnown RBP25.92■■□□□ 1.74
CMTM3-214ENST00000567572 SETD5Q9C0A6 1442 aa25.92■■□□□ 1.74
CMTM3-214ENST00000567572 RAB3GAP2Q9H2M9 1393 aa25.91■■□□□ 1.74
CMTM3-214ENST00000567572 CLASP1Q7Z460 1538 aa25.89■■□□□ 1.73
CMTM3-214ENST00000567572 NEUROD1Q13562 356 aa25.88■■□□□ 1.73
CMTM3-214ENST00000567572 MIA2Q96PC5 1412 aa25.88■■□□□ 1.73
CMTM3-214ENST00000567572 CDK11AQ9UQ88 783 aaPredicted RBP25.88■■□□□ 1.73
CMTM3-214ENST00000567572 TROQ12816 1431 aaPredicted RBP25.87■■□□□ 1.73
CMTM3-214ENST00000567572 ADCY10Q96PN6 1610 aa25.85■■□□□ 1.73
CMTM3-214ENST00000567572 PTPRGP23470 1445 aa25.84■■□□□ 1.73
CMTM3-214ENST00000567572 PTPRKQ15262 1439 aa25.83■■□□□ 1.73
CMTM3-214ENST00000567572 ATP10BO94823 1461 aa25.8■■□□□ 1.72
CMTM3-214ENST00000567572 ERCC6L2Q5T890 1561 aa25.78■■□□□ 1.72
CMTM3-214ENST00000567572 HFM1A2PYH4 1435 aa25.77■■□□□ 1.72
CMTM3-214ENST00000567572 MAPKBP1O60336 1514 aa25.77■■□□□ 1.72
CMTM3-214ENST00000567572 PELP1Q8IZL8 1130 aaKnown RBP25.77■■□□□ 1.72
CMTM3-214ENST00000567572 KIF14Q15058 1648 aa25.77■■□□□ 1.72
CMTM3-214ENST00000567572 ITSN2Q9NZM3 1697 aa25.73■■□□□ 1.71
CMTM3-214ENST00000567572 UACAQ9BZF9 1416 aa25.72■■□□□ 1.71
CMTM3-214ENST00000567572 MIER1Q8N108 512 aa25.72■■□□□ 1.71
CMTM3-214ENST00000567572 NAIPQ13075 1403 aa25.69■■□□□ 1.7
CMTM3-214ENST00000567572 AKNAQ7Z591 1439 aa25.68■■□□□ 1.7
CMTM3-214ENST00000567572 GPATCH8Q9UKJ3 1502 aaKnown RBP25.67■■□□□ 1.7
CMTM3-214ENST00000567572 ABCC2Q92887 1545 aa25.67■■□□□ 1.7
CMTM3-214ENST00000567572 DNMT1P26358 1616 aaKnown RBP25.66■■□□□ 1.7
CMTM3-214ENST00000567572 PLEKHD1A6NEE1 506 aa25.66■■□□□ 1.7
CMTM3-214ENST00000567572 GCC2Q8IWJ2 1684 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms