RNA–Protein interactions for RNA: ENST00000566651.1

GGA2-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 3

Gene GGA2, Length 332 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-207ENST00000566651 KIF13AQ9H1H9 1805 aa12.78□□□□□ -0.36
GGA2-207ENST00000566651 KIF21BO75037 1637 aa12.78□□□□□ -0.36
GGA2-207ENST00000566651 PRXQ9BXM0 1461 aa12.78□□□□□ -0.36
GGA2-207ENST00000566651 UBTFP17480 764 aaKnown RBP12.77□□□□□ -0.37
GGA2-207ENST00000566651 CARMIL1Q5VZK9 1371 aa12.77□□□□□ -0.37
GGA2-207ENST00000566651 ERICH3Q5RHP9 1530 aa12.76□□□□□ -0.37
GGA2-207ENST00000566651 RAPGEF2Q9Y4G8 1499 aa12.75□□□□□ -0.37
GGA2-207ENST00000566651 CEP170Q5SW79 1584 aa12.74□□□□□ -0.37
GGA2-207ENST00000566651 ILDR1Q86SU0 546 aaPredicted RBP12.74□□□□□ -0.37
GGA2-207ENST00000566651 CUL7Q14999 1698 aa12.73□□□□□ -0.37
GGA2-207ENST00000566651 TNIKQ9UKE5 1360 aa12.71□□□□□ -0.37
GGA2-207ENST00000566651 GRIN2AQ12879 1464 aa12.71□□□□□ -0.38
GGA2-207ENST00000566651 FHAD1B1AJZ9 1412 aa12.7□□□□□ -0.38
GGA2-207ENST00000566651 SHROOM2Q13796 1616 aa12.7□□□□□ -0.38
GGA2-207ENST00000566651 NUP160Q12769 1436 aa12.67□□□□□ -0.38
GGA2-207ENST00000566651 ADAMTS12P58397 1594 aa12.67□□□□□ -0.38
GGA2-207ENST00000566651 KDM4FA0A1W2PPD8 638 aa12.65□□□□□ -0.38
GGA2-207ENST00000566651 ABCC10Q5T3U5 1492 aa12.63□□□□□ -0.39
GGA2-207ENST00000566651 CEP162Q5TB80 1403 aa12.62□□□□□ -0.39
GGA2-207ENST00000566651 KDM6BO15054 1643 aa12.62□□□□□ -0.39
GGA2-207ENST00000566651 DIP2BQ9P265 1576 aa12.62□□□□□ -0.39
GGA2-207ENST00000566651 RANGAP1P46060 587 aaPredicted RBP12.62□□□□□ -0.39
GGA2-207ENST00000566651 FAM69CQ0P6D2 419 aa12.6□□□□□ -0.39
GGA2-207ENST00000566651 MAPKBP1O60336 1514 aa12.59□□□□□ -0.39
GGA2-207ENST00000566651 CLIP1P30622 1438 aa12.58□□□□□ -0.4
GGA2-207ENST00000566651 PRG4Q92954 1404 aaPredicted RBP12.58□□□□□ -0.4
GGA2-207ENST00000566651 ADCY10Q96PN6 1610 aa12.54□□□□□ -0.4
GGA2-207ENST00000566651 TSPOAP1O95153 1857 aa12.53□□□□□ -0.4
GGA2-207ENST00000566651 CTTNBP2Q8WZ74 1663 aa12.51□□□□□ -0.41
GGA2-207ENST00000566651 KIAA0586Q9BVV6 1533 aa12.51□□□□□ -0.41
GGA2-207ENST00000566651 NPM1P06748 294 aaKnown RBP eCLIP12.5□□□□□ -0.41
GGA2-207ENST00000566651 IQGAP2Q13576 1575 aa12.48□□□□□ -0.41
GGA2-207ENST00000566651 ADGRL1O94910 1474 aa12.48□□□□□ -0.41
GGA2-207ENST00000566651 ARHGAP35Q9NRY4 1499 aa12.48□□□□□ -0.41
GGA2-207ENST00000566651 JPH4Q96JJ6 628 aa12.48□□□□□ -0.41
GGA2-207ENST00000566651 HECW2Q9P2P5 1572 aa12.47□□□□□ -0.41
GGA2-207ENST00000566651 P3H3Q8IVL6 736 aa12.47□□□□□ -0.41
GGA2-207ENST00000566651 EFCAB5A4FU69 1503 aa12.47□□□□□ -0.41
GGA2-207ENST00000566651 VPS8Q8N3P4 1428 aa12.44□□□□□ -0.42
GGA2-207ENST00000566651 UGGT2Q9NYU1 1516 aa12.43□□□□□ -0.42
GGA2-207ENST00000566651 FHOD3Q2V2M9 1422 aa12.43□□□□□ -0.42
GGA2-207ENST00000566651 PPRC1Q5VV67 1664 aaKnown RBP12.42□□□□□ -0.42
GGA2-207ENST00000566651 SAMD9Q5K651 1589 aa12.41□□□□□ -0.42
GGA2-207ENST00000566651 CARMIL2Q6F5E8 1435 aa12.39□□□□□ -0.43
GGA2-207ENST00000566651 FMN1Q68DA7 1419 aa12.37□□□□□ -0.43
GGA2-207ENST00000566651 APLP2Q06481 763 aa12.37□□□□□ -0.43
GGA2-207ENST00000566651 DISP1Q96F81 1524 aa12.37□□□□□ -0.43
GGA2-207ENST00000566651 KIAA0556O60303 1618 aa12.36□□□□□ -0.43
GGA2-207ENST00000566651 TTBK1Q5TCY1 1321 aaPredicted RBP12.36□□□□□ -0.43
GGA2-207ENST00000566651 GLI2P10070 1586 aa12.35□□□□□ -0.43
GGA2-207ENST00000566651 ATP1B4Q9UN42 357 aaPredicted RBP12.35□□□□□ -0.43
GGA2-207ENST00000566651 COL17A1Q9UMD9 1497 aaPredicted RBP12.34□□□□□ -0.43
GGA2-207ENST00000566651 ABCC2Q92887 1545 aa12.33□□□□□ -0.44
GGA2-207ENST00000566651 ASXL2Q76L83 1435 aa12.33□□□□□ -0.44
GGA2-207ENST00000566651 CASKIN1Q8WXD9 1431 aa12.31□□□□□ -0.44
GGA2-207ENST00000566651 PPARGC1BQ86YN6 1023 aaKnown RBP12.31□□□□□ -0.44
GGA2-207ENST00000566651 PLB1Q6P1J6 1458 aa12.31□□□□□ -0.44
GGA2-207ENST00000566651 FYCO1Q9BQS8 1478 aa12.3□□□□□ -0.44
GGA2-207ENST00000566651 PCF11O94913 1555 aaKnown RBP12.3□□□□□ -0.44
GGA2-207ENST00000566651 MAP3K4Q9Y6R4 1608 aa12.29□□□□□ -0.44
GGA2-207ENST00000566651 PTPRGP23470 1445 aa12.29□□□□□ -0.44
GGA2-207ENST00000566651 FBXO41Q8TF61 875 aa12.29□□□□□ -0.44
GGA2-207ENST00000566651 TEX14Q8IWB6 1497 aa12.26□□□□□ -0.45
GGA2-207ENST00000566651 EPRSP07814 1512 aaKnown RBP12.26□□□□□ -0.45
GGA2-207ENST00000566651 UHRF1BP1LA0JNW5 1464 aa12.24□□□□□ -0.45
GGA2-207ENST00000566651 HECW1Q76N89 1606 aa12.24□□□□□ -0.45
GGA2-207ENST00000566651 MAP3K1Q13233 1512 aa12.23□□□□□ -0.45
GGA2-207ENST00000566651 TIAM1Q13009 1591 aa12.22□□□□□ -0.45
GGA2-207ENST00000566651 ARID3CA6NKF2 412 aa12.22□□□□□ -0.45
GGA2-207ENST00000566651 RAPGEF6Q8TEU7 1601 aa12.22□□□□□ -0.45
GGA2-207ENST00000566651 CCDC18Q5T9S5 1454 aa12.21□□□□□ -0.45
GGA2-207ENST00000566651 KANK4Q5T7N3 995 aaPredicted RBP12.21□□□□□ -0.45
GGA2-207ENST00000566651 UACAQ9BZF9 1416 aa12.2□□□□□ -0.46
GGA2-207ENST00000566651 ZCCHC11Q5TAX3 1644 aaKnown RBP12.2□□□□□ -0.46
GGA2-207ENST00000566651 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.2□□□□□ -0.46
GGA2-207ENST00000566651 HNRNPUL2Q1KMD3 747 aaKnown RBP12.2□□□□□ -0.46
GGA2-207ENST00000566651 KDM5BQ9UGL1 1544 aa12.2□□□□□ -0.46
GGA2-207ENST00000566651 ABCA8O94911 1581 aa12.19□□□□□ -0.46
GGA2-207ENST00000566651 NUP153P49790 1475 aaKnown RBP12.19□□□□□ -0.46
GGA2-207ENST00000566651 LRRC9Q6ZRR7 1453 aa12.18□□□□□ -0.46
GGA2-207ENST00000566651 CFAP43Q8NDM7 1665 aa12.18□□□□□ -0.46
GGA2-207ENST00000566651 MTUS2Q5JR59 1369 aa12.18□□□□□ -0.46
GGA2-207ENST00000566651 TRIM26Q12899 539 aaPredicted RBP12.17□□□□□ -0.46
GGA2-207ENST00000566651 CDK13Q14004 1512 aaKnown RBP12.16□□□□□ -0.46
GGA2-207ENST00000566651 CDK11AQ9UQ88 783 aaPredicted RBP12.16□□□□□ -0.46
GGA2-207ENST00000566651 LMTK3Q96Q04 1460 aa12.14□□□□□ -0.47
GGA2-207ENST00000566651 WDR7Q9Y4E6 1490 aa12.14□□□□□ -0.47
GGA2-207ENST00000566651 EHBP1L1Q8N3D4 1523 aa12.12□□□□□ -0.47
GGA2-207ENST00000566651 LRRIQ1Q96JM4 1722 aa12.12□□□□□ -0.47
GGA2-207ENST00000566651 PCGF6Q9BYE7 350 aa12.12□□□□□ -0.47
GGA2-207ENST00000566651 ATP10BO94823 1461 aa12.12□□□□□ -0.47
GGA2-207ENST00000566651 MAGI3Q5TCQ9 1506 aa12.11□□□□□ -0.47
GGA2-207ENST00000566651 PLEKHD1A6NEE1 506 aa12.11□□□□□ -0.47
GGA2-207ENST00000566651 PTPRMP28827 1452 aa12.1□□□□□ -0.47
GGA2-207ENST00000566651 CD109Q6YHK3 1445 aa12.09□□□□□ -0.47
GGA2-207ENST00000566651 ADAMTSL3P82987 1691 aa12.09□□□□□ -0.47
GGA2-207ENST00000566651 TROQ12816 1431 aaPredicted RBP12.08□□□□□ -0.48
GGA2-207ENST00000566651 NCOA2Q15596 1464 aa12.07□□□□□ -0.48
GGA2-207ENST00000566651 PHLDB1Q86UU1 1377 aa12.06□□□□□ -0.48
GGA2-207ENST00000566651 SUPT6HQ7KZ85 1726 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms