RNA–Protein interactions for RNA: ENST00000566514.5

TCF4-234, Transcript of transcription factor 4, humanhuman

TSL 3

Gene TCF4, Length 969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-234ENST00000566514 SHROOM4Q9ULL8 1493 aa12.93□□□□□ -0.34
TCF4-234ENST00000566514 SP7Q8TDD2 431 aaPredicted RBP12.9□□□□□ -0.34
TCF4-234ENST00000566514 ZBTB47Q9UFB7 747 aaPredicted RBP12.89□□□□□ -0.35
TCF4-234ENST00000566514 ZRANB1Q9UGI0 708 aa12.85□□□□□ -0.35
TCF4-234ENST00000566514 PAK3O75914 559 aaPredicted RBP12.84□□□□□ -0.35
TCF4-234ENST00000566514 KLHL34Q8N239 644 aa12.84□□□□□ -0.35
TCF4-234ENST00000566514 CC2D2AQ9P2K1 1620 aa12.82□□□□□ -0.36
TCF4-234ENST00000566514 EIF4G1Q04637 1599 aaKnown RBP12.81□□□□□ -0.36
TCF4-234ENST00000566514 TSPYL2Q9H2G4 693 aaPredicted RBP12.8□□□□□ -0.36
TCF4-234ENST00000566514 CECR2Q9BXF3 1484 aa12.78□□□□□ -0.36
TCF4-234ENST00000566514 RASEFQ8IZ41 740 aa12.76□□□□□ -0.37
TCF4-234ENST00000566514 IFNLR1Q8IU57 520 aaPredicted RBP12.75□□□□□ -0.37
TCF4-234ENST00000566514 NUBP1P53384 320 aa12.74□□□□□ -0.37
TCF4-234ENST00000566514 GABBR2O75899 941 aa12.72□□□□□ -0.37
TCF4-234ENST00000566514 ZNF579Q8NAF0 562 aaKnown RBP12.72□□□□□ -0.37
TCF4-234ENST00000566514 PHF12Q96QT6 1004 aa12.7□□□□□ -0.38
TCF4-234ENST00000566514 FAM212AQ96EL1 285 aa12.67□□□□□ -0.38
TCF4-234ENST00000566514 DCAF8Q5TAQ9 597 aa12.66□□□□□ -0.38
TCF4-234ENST00000566514 SPOCK2Q92563 424 aa12.65□□□□□ -0.38
TCF4-234ENST00000566514 CCDC61Q9Y6R9 512 aa12.65□□□□□ -0.38
TCF4-234ENST00000566514 CLCN6P51797 869 aa12.63□□□□□ -0.39
TCF4-234ENST00000566514 GALR2O43603 387 aaPredicted RBP12.57□□□□□ -0.4
TCF4-234ENST00000566514 GSE1Q14687 1217 aa12.56□□□□□ -0.4
TCF4-234ENST00000566514 KIF12Q96FN5 646 aa12.56□□□□□ -0.4
TCF4-234ENST00000566514 CIZ1Q9ULV3 898 aaPredicted RBP12.54□□□□□ -0.4
TCF4-234ENST00000566514 MAP3K13O43283 966 aa12.53□□□□□ -0.4
TCF4-234ENST00000566514 MS4A3Q96HJ5 214 aa12.53□□□□□ -0.4
TCF4-234ENST00000566514 PYGBP11216 843 aa12.51□□□□□ -0.41
TCF4-234ENST00000566514 DCBLD2Q96PD2 775 aa12.51□□□□□ -0.41
TCF4-234ENST00000566514 PCDHB13Q9Y5F0 798 aa12.47□□□□□ -0.41
TCF4-234ENST00000566514 POTEIP0CG38 1075 aa12.43□□□□□ -0.42
TCF4-234ENST00000566514 NCAPD3P42695 1498 aa12.42□□□□□ -0.42
TCF4-234ENST00000566514 SGIP1Q9BQI5 828 aa12.42□□□□□ -0.42
TCF4-234ENST00000566514 ATAD2BQ9ULI0 1458 aa12.4□□□□□ -0.42
TCF4-234ENST00000566514 IFNL1Q8IU54 200 aa12.4□□□□□ -0.42
TCF4-234ENST00000566514 SMARCA4P51532 1647 aa12.4□□□□□ -0.42
TCF4-234ENST00000566514 TRPC6Q9Y210 931 aa12.39□□□□□ -0.43
TCF4-234ENST00000566514 CHRM1P11229 460 aaPredicted RBP12.37□□□□□ -0.43
TCF4-234ENST00000566514 PCDHB8Q9UN66 801 aa12.36□□□□□ -0.43
TCF4-234ENST00000566514 SMARCA2P51531 1590 aa12.35□□□□□ -0.43
TCF4-234ENST00000566514 BAZ1AQ9NRL2 1556 aaPredicted RBP12.34□□□□□ -0.43
TCF4-234ENST00000566514 HMGXB3Q12766 1538 aa12.32□□□□□ -0.44
TCF4-234ENST00000566514 ATMINO43313 823 aaPredicted RBP12.32□□□□□ -0.44
TCF4-234ENST00000566514 TRIM41Q8WV44 630 aa12.32□□□□□ -0.44
TCF4-234ENST00000566514 BMP2KQ9NSY1 1161 aaPredicted RBP12.32□□□□□ -0.44
TCF4-234ENST00000566514 TIE1P35590 1138 aa12.31□□□□□ -0.44
TCF4-234ENST00000566514 ASTLQ6HA08 431 aaPredicted RBP12.31□□□□□ -0.44
TCF4-234ENST00000566514 ZNF467Q7Z7K2 595 aaPredicted RBP12.31□□□□□ -0.44
TCF4-234ENST00000566514 ATN1P54259 1190 aaPredicted RBP12.29□□□□□ -0.44
TCF4-234ENST00000566514 PELP1Q8IZL8 1130 aaKnown RBP12.29□□□□□ -0.44
TCF4-234ENST00000566514 MROH2BQ7Z745 1585 aa12.29□□□□□ -0.44
TCF4-234ENST00000566514 BAZ1BQ9UIG0 1483 aaKnown RBP12.27□□□□□ -0.44
TCF4-234ENST00000566514 PEG3Q9GZU2 1588 aa12.27□□□□□ -0.44
TCF4-234ENST00000566514 TTLL13PA6NNM8 815 aa12.27□□□□□ -0.45
TCF4-234ENST00000566514 TMEM106CQ9BVX2 250 aa12.27□□□□□ -0.45
TCF4-234ENST00000566514 NESP48681 1621 aa12.24□□□□□ -0.45
TCF4-234ENST00000566514 ERCC6Q03468 1493 aa12.23□□□□□ -0.45
TCF4-234ENST00000566514 ECM2O94769 699 aaPredicted RBP12.23□□□□□ -0.45
TCF4-234ENST00000566514 PKD2Q13563 968 aa12.22□□□□□ -0.45
TCF4-234ENST00000566514 PSEN1P49768 467 aa12.2□□□□□ -0.46
TCF4-234ENST00000566514 TRIM35Q9UPQ4 493 aa12.2□□□□□ -0.46
TCF4-234ENST00000566514 PDAP1Q13442 181 aaKnown RBP12.19□□□□□ -0.46
TCF4-234ENST00000566514 SLC39A7Q92504 469 aa12.19□□□□□ -0.46
TCF4-234ENST00000566514 CUX2O14529 1486 aa12.19□□□□□ -0.46
TCF4-234ENST00000566514 C7P10643 843 aa12.17□□□□□ -0.46
TCF4-234ENST00000566514 METRNQ9UJH8 293 aa12.17□□□□□ -0.46
TCF4-234ENST00000566514 RIOK3O14730 519 aaKnown RBP12.16□□□□□ -0.46
TCF4-234ENST00000566514 RNF25Q96BH1 459 aaPredicted RBP12.16□□□□□ -0.46
TCF4-234ENST00000566514 WIZO95785 1651 aa12.13□□□□□ -0.47
TCF4-234ENST00000566514 LHX8Q68G74 356 aa12.13□□□□□ -0.47
TCF4-234ENST00000566514 DNAJC5Q9H3Z4 198 aa12.12□□□□□ -0.47
TCF4-234ENST00000566514 LAMC3Q9Y6N6 1575 aa12.12□□□□□ -0.47
TCF4-234ENST00000566514 GOLGA2Q08379 1002 aa12.11□□□□□ -0.47
TCF4-234ENST00000566514 SEC24BO95487 1268 aa12.1□□□□□ -0.47
TCF4-234ENST00000566514 RGL2O15211 777 aa12.09□□□□□ -0.47
TCF4-234ENST00000566514 VGFO15240 615 aaPredicted RBP12.09□□□□□ -0.47
TCF4-234ENST00000566514 IER5LQ5T953 404 aa12.08□□□□□ -0.48
TCF4-234ENST00000566514 THOC2Q8NI27 1593 aaKnown RBP12.08□□□□□ -0.48
TCF4-234ENST00000566514 CABP2Q9NPB3 220 aa12.07□□□□□ -0.48
TCF4-234ENST00000566514 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.06□□□□□ -0.48
TCF4-234ENST00000566514 MKRN3Q13064 507 aaKnown RBP12.06□□□□□ -0.48
TCF4-234ENST00000566514 ZFP91Q96JP5 570 aaPredicted RBP12.06□□□□□ -0.48
TCF4-234ENST00000566514 TAOK2Q9UL54 1235 aa12.06□□□□□ -0.48
TCF4-234ENST00000566514 KIF21AQ7Z4S6 1674 aa12.06□□□□□ -0.48
TCF4-234ENST00000566514 CADPSQ9ULU8 1353 aa12.05□□□□□ -0.48
TCF4-234ENST00000566514 RSF1Q96T23 1441 aaPredicted RBP12.05□□□□□ -0.48
TCF4-234ENST00000566514 POTEFA5A3E0 1075 aa12.05□□□□□ -0.48
TCF4-234ENST00000566514 POTEB2H3BUK9 544 aa12.05□□□□□ -0.48
TCF4-234ENST00000566514 COLQQ9Y215 455 aaPredicted RBP12.05□□□□□ -0.48
TCF4-234ENST00000566514 PDS5BQ9NTI5 1447 aa12.04□□□□□ -0.48
TCF4-234ENST00000566514 PLCG2P16885 1265 aa12.02□□□□□ -0.49
TCF4-234ENST00000566514 IRX5P78411 483 aaPredicted RBP12□□□□□ -0.49
TCF4-234ENST00000566514 OCEL1Q9H607 264 aa11.98□□□□□ -0.49
TCF4-234ENST00000566514 TOP2AP11388 1531 aaKnown RBP11.97□□□□□ -0.49
TCF4-234ENST00000566514 EFCAB3Q8N7B9 438 aa11.97□□□□□ -0.49
TCF4-234ENST00000566514 BCL11BQ9C0K0 894 aaPredicted RBP11.97□□□□□ -0.49
TCF4-234ENST00000566514 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.97□□□□□ -0.49
TCF4-234ENST00000566514 STK24Q9Y6E0 443 aa11.97□□□□□ -0.49
TCF4-234ENST00000566514 STK25O00506 426 aa11.96□□□□□ -0.49
TCF4-234ENST00000566514 MRC2Q9UBG0 1479 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms