RNA–Protein interactions for RNA: ENST00000566087.5

NSMCE1-211, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-211ENST00000566087 JPH4Q96JJ6 628 aa18.41■□□□□ 0.54
NSMCE1-211ENST00000566087 RUSC2Q8N2Y8 1516 aa18.37■□□□□ 0.53
NSMCE1-211ENST00000566087 FAM69CQ0P6D2 419 aa18.35■□□□□ 0.53
NSMCE1-211ENST00000566087 ABCC10Q5T3U5 1492 aa18.32■□□□□ 0.52
NSMCE1-211ENST00000566087 SENP3Q9H4L4 574 aaPredicted RBP18.31■□□□□ 0.52
NSMCE1-211ENST00000566087 ADCY10Q96PN6 1610 aa18.31■□□□□ 0.52
NSMCE1-211ENST00000566087 NPM1P06748 294 aaKnown RBP eCLIP18.3■□□□□ 0.52
NSMCE1-211ENST00000566087 DIP2BQ9P265 1576 aa18.29■□□□□ 0.52
NSMCE1-211ENST00000566087 MAPKBP1O60336 1514 aa18.28■□□□□ 0.52
NSMCE1-211ENST00000566087 TSPOAP1O95153 1857 aa18.24■□□□□ 0.51
NSMCE1-211ENST00000566087 PHF23Q9BUL5 403 aaPredicted RBP18.23■□□□□ 0.51
NSMCE1-211ENST00000566087 KDM6BO15054 1643 aa18.21■□□□□ 0.51
NSMCE1-211ENST00000566087 KIAA0586Q9BVV6 1533 aa18.2■□□□□ 0.5
NSMCE1-211ENST00000566087 TTBK1Q5TCY1 1321 aaPredicted RBP18.19■□□□□ 0.5
NSMCE1-211ENST00000566087 IGF1RP08069 1367 aa18.18■□□□□ 0.5
NSMCE1-211ENST00000566087 KDM4FA0A1W2PPD8 638 aa18.18■□□□□ 0.5
NSMCE1-211ENST00000566087 CUL7Q14999 1698 aa18.15■□□□□ 0.5
NSMCE1-211ENST00000566087 KIF27Q86VH2 1401 aa18.14■□□□□ 0.49
NSMCE1-211ENST00000566087 PTPRGP23470 1445 aa18.11■□□□□ 0.49
NSMCE1-211ENST00000566087 CARMIL1Q5VZK9 1371 aa18.05■□□□□ 0.48
NSMCE1-211ENST00000566087 TNIKQ9UKE5 1360 aa18.04■□□□□ 0.48
NSMCE1-211ENST00000566087 ABCC2Q92887 1545 aa18.04■□□□□ 0.48
NSMCE1-211ENST00000566087 PPRC1Q5VV67 1664 aaKnown RBP18.04■□□□□ 0.48
NSMCE1-211ENST00000566087 ASXL2Q76L83 1435 aa18.04■□□□□ 0.48
NSMCE1-211ENST00000566087 CARMIL2Q6F5E8 1435 aa18.03■□□□□ 0.48
NSMCE1-211ENST00000566087 IQGAP2Q13576 1575 aa18.01■□□□□ 0.47
NSMCE1-211ENST00000566087 PLB1Q6P1J6 1458 aa17.99■□□□□ 0.47
NSMCE1-211ENST00000566087 GLI2P10070 1586 aa17.99■□□□□ 0.47
NSMCE1-211ENST00000566087 ADGRL1O94910 1474 aa17.96■□□□□ 0.47
NSMCE1-211ENST00000566087 DISP1Q96F81 1524 aa17.96■□□□□ 0.47
NSMCE1-211ENST00000566087 UACAQ9BZF9 1416 aa17.96■□□□□ 0.47
NSMCE1-211ENST00000566087 UHRF1BP1LA0JNW5 1464 aa17.95■□□□□ 0.46
NSMCE1-211ENST00000566087 COL17A1Q9UMD9 1497 aaPredicted RBP17.95■□□□□ 0.46
NSMCE1-211ENST00000566087 ILDR1Q86SU0 546 aaPredicted RBP17.94■□□□□ 0.46
NSMCE1-211ENST00000566087 EPRSP07814 1512 aaKnown RBP17.92■□□□□ 0.46
NSMCE1-211ENST00000566087 ZCCHC11Q5TAX3 1644 aaKnown RBP17.91■□□□□ 0.46
NSMCE1-211ENST00000566087 MAP3K4Q9Y6R4 1608 aa17.91■□□□□ 0.46
NSMCE1-211ENST00000566087 KDM5BQ9UGL1 1544 aa17.89■□□□□ 0.45
NSMCE1-211ENST00000566087 UGGT2Q9NYU1 1516 aa17.87■□□□□ 0.45
NSMCE1-211ENST00000566087 KIAA0556O60303 1618 aa17.87■□□□□ 0.45
NSMCE1-211ENST00000566087 RAPGEF2Q9Y4G8 1499 aa17.85■□□□□ 0.45
NSMCE1-211ENST00000566087 TEX14Q8IWB6 1497 aa17.84■□□□□ 0.45
NSMCE1-211ENST00000566087 HECW2Q9P2P5 1572 aa17.82■□□□□ 0.44
NSMCE1-211ENST00000566087 WDR7Q9Y4E6 1490 aa17.8■□□□□ 0.44
NSMCE1-211ENST00000566087 KCNH8Q96L42 1107 aa17.76■□□□□ 0.43
NSMCE1-211ENST00000566087 CTTNBP2Q8WZ74 1663 aa17.76■□□□□ 0.43
NSMCE1-211ENST00000566087 EEA1Q15075 1411 aa17.74■□□□□ 0.43
NSMCE1-211ENST00000566087 CSRNP3Q8WYN3 585 aa17.74■□□□□ 0.43
NSMCE1-211ENST00000566087 CD109Q6YHK3 1445 aa17.72■□□□□ 0.43
NSMCE1-211ENST00000566087 CFAP43Q8NDM7 1665 aa17.71■□□□□ 0.43
NSMCE1-211ENST00000566087 ABCA8O94911 1581 aa17.71■□□□□ 0.43
NSMCE1-211ENST00000566087 MAGI3Q5TCQ9 1506 aa17.7■□□□□ 0.42
NSMCE1-211ENST00000566087 FAM9AQ8IZU1 332 aaPredicted RBP17.69■□□□□ 0.42
NSMCE1-211ENST00000566087 KIF21BO75037 1637 aa17.69■□□□□ 0.42
NSMCE1-211ENST00000566087 ARID3CA6NKF2 412 aa17.68■□□□□ 0.42
NSMCE1-211ENST00000566087 GOLGA3Q08378 1498 aa17.68■□□□□ 0.42
NSMCE1-211ENST00000566087 PRXQ9BXM0 1461 aa17.63■□□□□ 0.41
NSMCE1-211ENST00000566087 P3H3Q8IVL6 736 aa17.62■□□□□ 0.41
NSMCE1-211ENST00000566087 ARAP3Q8WWN8 1544 aa17.57■□□□□ 0.4
NSMCE1-211ENST00000566087 ATP10BO94823 1461 aa17.57■□□□□ 0.4
NSMCE1-211ENST00000566087 RAPGEF3O95398 923 aa17.53■□□□□ 0.4
NSMCE1-211ENST00000566087 ABCA9Q8IUA7 1624 aa17.53■□□□□ 0.4
NSMCE1-211ENST00000566087 ADAMTSL3P82987 1691 aa17.52■□□□□ 0.39
NSMCE1-211ENST00000566087 PTPRMP28827 1452 aa17.5■□□□□ 0.39
NSMCE1-211ENST00000566087 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.48■□□□□ 0.39
NSMCE1-211ENST00000566087 HNRNPUL2Q1KMD3 747 aaKnown RBP17.48■□□□□ 0.39
NSMCE1-211ENST00000566087 RAPGEF6Q8TEU7 1601 aa17.47■□□□□ 0.39
NSMCE1-211ENST00000566087 SAMD9Q5K651 1589 aa17.47■□□□□ 0.39
NSMCE1-211ENST00000566087 FRMPD1Q5SYB0 1578 aa17.46■□□□□ 0.39
NSMCE1-211ENST00000566087 UBTFP17480 764 aaKnown RBP17.46■□□□□ 0.39
NSMCE1-211ENST00000566087 FBXO41Q8TF61 875 aa17.46■□□□□ 0.39
NSMCE1-211ENST00000566087 BCORL1Q5H9F3 1711 aa17.45■□□□□ 0.38
NSMCE1-211ENST00000566087 RANGAP1P46060 587 aaPredicted RBP17.45■□□□□ 0.38
NSMCE1-211ENST00000566087 MADDQ8WXG6 1647 aa17.45■□□□□ 0.38
NSMCE1-211ENST00000566087 ARID4BQ4LE39 1312 aaPredicted RBP17.45■□□□□ 0.38
NSMCE1-211ENST00000566087 PHLDB1Q86UU1 1377 aa17.44■□□□□ 0.38
NSMCE1-211ENST00000566087 NEO1Q92859 1461 aa17.44■□□□□ 0.38
NSMCE1-211ENST00000566087 NUP153P49790 1475 aaKnown RBP17.41■□□□□ 0.38
NSMCE1-211ENST00000566087 RIMS1Q86UR5 1692 aaKnown RBP17.39■□□□□ 0.37
NSMCE1-211ENST00000566087 PLPPR3Q6T4P5 718 aa17.39■□□□□ 0.37
NSMCE1-211ENST00000566087 PCF11O94913 1555 aaKnown RBP17.39■□□□□ 0.37
NSMCE1-211ENST00000566087 FHOD3Q2V2M9 1422 aa17.38■□□□□ 0.37
NSMCE1-211ENST00000566087 LMTK3Q96Q04 1460 aa17.37■□□□□ 0.37
NSMCE1-211ENST00000566087 ARHGEF40Q8TER5 1519 aa17.37■□□□□ 0.37
NSMCE1-211ENST00000566087 RICTORQ6R327 1708 aa17.36■□□□□ 0.37
NSMCE1-211ENST00000566087 DENND4BO75064 1496 aaPredicted RBP17.34■□□□□ 0.37
NSMCE1-211ENST00000566087 AKNAQ7Z591 1439 aa17.33■□□□□ 0.36
NSMCE1-211ENST00000566087 HSPA2P54652 639 aa17.33■□□□□ 0.36
NSMCE1-211ENST00000566087 SIGLEC1Q9BZZ2 1709 aa17.33■□□□□ 0.36
NSMCE1-211ENST00000566087 PLEKHD1A6NEE1 506 aa17.32■□□□□ 0.36
NSMCE1-211ENST00000566087 EHMT2Q96KQ7 1210 aa17.32■□□□□ 0.36
NSMCE1-211ENST00000566087 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.31■□□□□ 0.36
NSMCE1-211ENST00000566087 FANCAO15360 1455 aa17.31■□□□□ 0.36
NSMCE1-211ENST00000566087 TTC37Q6PGP7 1564 aa17.31■□□□□ 0.36
NSMCE1-211ENST00000566087 YEATS2Q9ULM3 1422 aa17.29■□□□□ 0.36
NSMCE1-211ENST00000566087 CFAP74Q9C0B2 1584 aa17.28■□□□□ 0.36
NSMCE1-211ENST00000566087 EFCAB5A4FU69 1503 aa17.28■□□□□ 0.36
NSMCE1-211ENST00000566087 MLECQ14165 292 aa17.27■□□□□ 0.36
NSMCE1-211ENST00000566087 ZFYVE16Q7Z3T8 1539 aa17.26■□□□□ 0.35
NSMCE1-211ENST00000566087 ZMYM4Q5VZL5 1548 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms