RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 EIF4G1Q04637 1599 aaKnown RBP8.85□□□□□ -0.99
LINC01043-201ENST00000565936 SCAF1Q9H7N4 1312 aaKnown RBP8.85□□□□□ -0.99
LINC01043-201ENST00000565936 TNIKQ9UKE5 1360 aa8.84□□□□□ -0.99
LINC01043-201ENST00000565936 SOGA1O94964 1423 aa8.83□□□□□ -1
LINC01043-201ENST00000565936 KANK1Q14678 1352 aa8.83□□□□□ -1
LINC01043-201ENST00000565936 CEP162Q5TB80 1403 aa8.82□□□□□ -1
LINC01043-201ENST00000565936 KDM2AQ9Y2K7 1162 aa8.82□□□□□ -1
LINC01043-201ENST00000565936 CDCA8Q53HL2 280 aa8.82□□□□□ -1
LINC01043-201ENST00000565936 CCNB3Q8WWL7 1395 aa8.82□□□□□ -1
LINC01043-201ENST00000565936 NPM2Q86SE8 214 aaKnown RBP8.82□□□□□ -1
LINC01043-201ENST00000565936 CADPSQ9ULU8 1353 aa8.82□□□□□ -1
LINC01043-201ENST00000565936 RRP7BPQ9NSQ0 103 aa8.81□□□□□ -1
LINC01043-201ENST00000565936 HAP1P54257 671 aaPredicted RBP8.81□□□□□ -1
LINC01043-201ENST00000565936 ABCC8Q09428 1581 aa8.8□□□□□ -1
LINC01043-201ENST00000565936 CCDC88BA6NC98 1476 aa8.8□□□□□ -1
LINC01043-201ENST00000565936 MROH2BQ7Z745 1585 aa8.79□□□□□ -1
LINC01043-201ENST00000565936 TOP2AP11388 1531 aaKnown RBP8.79□□□□□ -1
LINC01043-201ENST00000565936 WDR43Q15061 677 aaKnown RBP eCLIP8.79□□□□□ -1
LINC01043-201ENST00000565936 TMC1Q8TDI8 760 aa8.76□□□□□ -1.01
LINC01043-201ENST00000565936 RTL5Q5HYW3 569 aaPredicted RBP8.76□□□□□ -1.01
LINC01043-201ENST00000565936 EIF4G2P78344 907 aaKnown RBP eCLIP8.75□□□□□ -1.01
LINC01043-201ENST00000565936 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.75□□□□□ -1.01
LINC01043-201ENST00000565936 ATAD2BQ9ULI0 1458 aa8.75□□□□□ -1.01
LINC01043-201ENST00000565936 CFAP53Q96M91 514 aa8.73□□□□□ -1.01
LINC01043-201ENST00000565936 FMN1Q68DA7 1419 aa8.73□□□□□ -1.01
LINC01043-201ENST00000565936 A0A0G2JS52 829 aa8.73□□□□□ -1.01
LINC01043-201ENST00000565936 EFCAB2Q5VUJ9 269 aa8.73□□□□□ -1.01
LINC01043-201ENST00000565936 POGKQ9P215 609 aa8.73□□□□□ -1.01
LINC01043-201ENST00000565936 ZBTB7CA1YPR0 619 aa8.72□□□□□ -1.01
LINC01043-201ENST00000565936 TDRD9Q8NDG6 1382 aaKnown RBP8.72□□□□□ -1.01
LINC01043-201ENST00000565936 RGL3Q3MIN7 710 aa8.72□□□□□ -1.01
LINC01043-201ENST00000565936 SMARCA4P51532 1647 aa8.72□□□□□ -1.01
LINC01043-201ENST00000565936 BCL11AQ9H165 835 aa8.72□□□□□ -1.01
LINC01043-201ENST00000565936 FANCD2Q9BXW9 1451 aa8.69□□□□□ -1.02
LINC01043-201ENST00000565936 OSCARQ8IYS5 282 aa8.69□□□□□ -1.02
LINC01043-201ENST00000565936 DDX10Q13206 875 aaKnown RBP8.68□□□□□ -1.02
LINC01043-201ENST00000565936 RSPH4AQ5TD94 716 aa8.68□□□□□ -1.02
LINC01043-201ENST00000565936 MLECQ14165 292 aa8.68□□□□□ -1.02
LINC01043-201ENST00000565936 WIZO95785 1651 aa8.68□□□□□ -1.02
LINC01043-201ENST00000565936 KNSTRNQ9Y448 316 aa8.67□□□□□ -1.02
LINC01043-201ENST00000565936 FAM9BQ8IZU0 186 aa8.67□□□□□ -1.02
LINC01043-201ENST00000565936 ARHGAP35Q9NRY4 1499 aa8.67□□□□□ -1.02
LINC01043-201ENST00000565936 MYH16Q9H6N6 1097 aa8.67□□□□□ -1.02
LINC01043-201ENST00000565936 RAPGEF2Q9Y4G8 1499 aa8.67□□□□□ -1.02
LINC01043-201ENST00000565936 UPF2Q9HAU5 1272 aaKnown RBP8.67□□□□□ -1.02
LINC01043-201ENST00000565936 CARD11Q9BXL7 1154 aa8.66□□□□□ -1.02
LINC01043-201ENST00000565936 HNRNPUQ00839 825 aaKnown RBP eCLIP8.65□□□□□ -1.02
LINC01043-201ENST00000565936 JPH4Q96JJ6 628 aa8.65□□□□□ -1.02
LINC01043-201ENST00000565936 NUDCQ9Y266 331 aa8.65□□□□□ -1.02
LINC01043-201ENST00000565936 PNNQ9H307 717 aaKnown RBP8.65□□□□□ -1.02
LINC01043-201ENST00000565936 MRS2Q9HD23 443 aa8.65□□□□□ -1.03
LINC01043-201ENST00000565936 GGT6Q6P531 493 aa8.64□□□□□ -1.03
LINC01043-201ENST00000565936 LMOD2Q6P5Q4 547 aa8.64□□□□□ -1.03
LINC01043-201ENST00000565936 SENP3Q9H4L4 574 aaPredicted RBP8.64□□□□□ -1.03
LINC01043-201ENST00000565936 PLEKHG5O94827 1062 aa8.64□□□□□ -1.03
LINC01043-201ENST00000565936 ANKRD30AQ9BXX3 1397 aa8.63□□□□□ -1.03
LINC01043-201ENST00000565936 CCDC18Q5T9S5 1454 aa8.62□□□□□ -1.03
LINC01043-201ENST00000565936 EID1Q9Y6B2 187 aa8.62□□□□□ -1.03
LINC01043-201ENST00000565936 VPS8Q8N3P4 1428 aa8.61□□□□□ -1.03
LINC01043-201ENST00000565936 ANP32AP39687 249 aaKnown RBP8.61□□□□□ -1.03
LINC01043-201ENST00000565936 NCAPD3P42695 1498 aa8.61□□□□□ -1.03
LINC01043-201ENST00000565936 MAPK8IP3Q9UPT6 1336 aa8.6□□□□□ -1.03
LINC01043-201ENST00000565936 TMF1P82094 1093 aa8.6□□□□□ -1.03
LINC01043-201ENST00000565936 TIMELESSQ9UNS1 1208 aa8.6□□□□□ -1.03
LINC01043-201ENST00000565936 HSP90AA1P07900 732 aaKnown RBP8.6□□□□□ -1.03
LINC01043-201ENST00000565936 SALL2Q9Y467 1007 aaPredicted RBP8.6□□□□□ -1.03
LINC01043-201ENST00000565936 PTPRGP23470 1445 aa8.6□□□□□ -1.03
LINC01043-201ENST00000565936 SPAG9O60271 1321 aaKnown RBP8.59□□□□□ -1.03
LINC01043-201ENST00000565936 PPM1GO15355 546 aaPredicted RBP8.59□□□□□ -1.03
LINC01043-201ENST00000565936 EIF5BO60841 1220 aaKnown RBP8.58□□□□□ -1.04
LINC01043-201ENST00000565936 SRPK2P78362 688 aaKnown RBP8.57□□□□□ -1.04
LINC01043-201ENST00000565936 CYB5RLQ6IPT4 315 aa8.57□□□□□ -1.04
LINC01043-201ENST00000565936 DCAF11Q8TEB1 546 aa8.57□□□□□ -1.04
LINC01043-201ENST00000565936 CHMP4BQ9H444 224 aaKnown RBP8.56□□□□□ -1.04
LINC01043-201ENST00000565936 GAPVD1Q14C86 1478 aa8.56□□□□□ -1.04
LINC01043-201ENST00000565936 NPHP1O15259 732 aa8.56□□□□□ -1.04
LINC01043-201ENST00000565936 HDGFL2Q7Z4V5 671 aaPredicted RBP8.56□□□□□ -1.04
LINC01043-201ENST00000565936 ARXQ96QS3 562 aa8.56□□□□□ -1.04
LINC01043-201ENST00000565936 KIF3BO15066 747 aa8.56□□□□□ -1.04
LINC01043-201ENST00000565936 SETD5Q9C0A6 1442 aa8.55□□□□□ -1.04
LINC01043-201ENST00000565936 WASHC2CQ9Y4E1 1318 aa8.55□□□□□ -1.04
LINC01043-201ENST00000565936 GTF3C3Q9Y5Q9 886 aa8.54□□□□□ -1.04
LINC01043-201ENST00000565936 EIF3AQ14152 1382 aaKnown RBP8.54□□□□□ -1.04
LINC01043-201ENST00000565936 PKD2Q13563 968 aa8.54□□□□□ -1.04
LINC01043-201ENST00000565936 NUP155O75694 1391 aa8.53□□□□□ -1.04
LINC01043-201ENST00000565936 CCDC136Q96JN2 1154 aa8.53□□□□□ -1.04
LINC01043-201ENST00000565936 MS4A1P11836 297 aa8.53□□□□□ -1.04
LINC01043-201ENST00000565936 AEBP2Q6ZN18 517 aaPredicted RBP8.53□□□□□ -1.04
LINC01043-201ENST00000565936 ANP32BQ92688 251 aaKnown RBP8.52□□□□□ -1.05
LINC01043-201ENST00000565936 FGD5Q6ZNL6 1462 aa8.52□□□□□ -1.05
LINC01043-201ENST00000565936 CHMP4AQ9BY43 222 aa8.52□□□□□ -1.05
LINC01043-201ENST00000565936 FHOD3Q2V2M9 1422 aa8.52□□□□□ -1.05
LINC01043-201ENST00000565936 HNRNPMP52272 730 aaKnown RBP eCLIP8.51□□□□□ -1.05
LINC01043-201ENST00000565936 MRC2Q9UBG0 1479 aa8.51□□□□□ -1.05
LINC01043-201ENST00000565936 UACAQ9BZF9 1416 aa8.51□□□□□ -1.05
LINC01043-201ENST00000565936 FKBP8Q14318 412 aa8.5□□□□□ -1.05
LINC01043-201ENST00000565936 HIRIP3Q9BW71 556 aaPredicted RBP8.5□□□□□ -1.05
LINC01043-201ENST00000565936 STK26Q9P289 416 aa8.5□□□□□ -1.05
LINC01043-201ENST00000565936 FTSJ3Q8IY81 847 aaKnown RBP8.49□□□□□ -1.05
LINC01043-201ENST00000565936 GRIN2BQ13224 1484 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms