RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 CTTNBP2Q8WZ74 1663 aa30.56■■■□□ 2.48
CLN6-205ENST00000564846 SNAPC4Q5SXM2 1469 aa30.49■■■□□ 2.47
CLN6-205ENST00000564846 MAGI1Q96QZ7 1491 aaPredicted RBP30.47■■■□□ 2.47
CLN6-205ENST00000564846 EFCAB5A4FU69 1503 aa30.44■■■□□ 2.46
CLN6-205ENST00000564846 PPARGC1BQ86YN6 1023 aaKnown RBP30.43■■■□□ 2.46
CLN6-205ENST00000564846 APLP2Q06481 763 aa30.38■■■□□ 2.45
CLN6-205ENST00000564846 SYNJ2O15056 1496 aa30.35■■■□□ 2.45
CLN6-205ENST00000564846 GRIN2AQ12879 1464 aa30.34■■■□□ 2.45
CLN6-205ENST00000564846 IQGAP2Q13576 1575 aa30.29■■■□□ 2.44
CLN6-205ENST00000564846 SAMD9Q5K651 1589 aa30.28■■■□□ 2.44
CLN6-205ENST00000564846 CHMP7Q8WUX9 453 aaPredicted RBP30.28■■■□□ 2.44
CLN6-205ENST00000564846 FHOD3Q2V2M9 1422 aa30.25■■■□□ 2.43
CLN6-205ENST00000564846 P3H3Q8IVL6 736 aa30.25■■■□□ 2.43
CLN6-205ENST00000564846 KIAA0586Q9BVV6 1533 aa30.24■■■□□ 2.43
CLN6-205ENST00000564846 TTBK1Q5TCY1 1321 aaPredicted RBP30.18■■■□□ 2.42
CLN6-205ENST00000564846 FMN1Q68DA7 1419 aa30.18■■■□□ 2.42
CLN6-205ENST00000564846 UGGT2Q9NYU1 1516 aa30.16■■■□□ 2.42
CLN6-205ENST00000564846 FBLN2P98095 1184 aa30.15■■■□□ 2.42
CLN6-205ENST00000564846 MAP3K1Q13233 1512 aa30.14■■■□□ 2.42
CLN6-205ENST00000564846 NUP160Q12769 1436 aa30.13■■■□□ 2.41
CLN6-205ENST00000564846 CEP170Q5SW79 1584 aa30.12■■■□□ 2.41
CLN6-205ENST00000564846 CASKIN1Q8WXD9 1431 aa30.11■■■□□ 2.41
CLN6-205ENST00000564846 FYCO1Q9BQS8 1478 aa30.11■■■□□ 2.41
CLN6-205ENST00000564846 PCF11O94913 1555 aaKnown RBP30.1■■■□□ 2.41
CLN6-205ENST00000564846 TIAM1Q13009 1591 aa30.05■■■□□ 2.4
CLN6-205ENST00000564846 KANK4Q5T7N3 995 aaPredicted RBP30.04■■■□□ 2.4
CLN6-205ENST00000564846 DISP1Q96F81 1524 aa29.99■■■□□ 2.39
CLN6-205ENST00000564846 KIAA0556O60303 1618 aa29.97■■■□□ 2.39
CLN6-205ENST00000564846 CFAP43Q8NDM7 1665 aa29.96■■■□□ 2.39
CLN6-205ENST00000564846 ATP1B4Q9UN42 357 aaPredicted RBP29.95■■■□□ 2.39
CLN6-205ENST00000564846 LRRC9Q6ZRR7 1453 aa29.93■■■□□ 2.38
CLN6-205ENST00000564846 CHD1O14646 1710 aa29.92■■■□□ 2.38
CLN6-205ENST00000564846 JPH4Q96JJ6 628 aa29.91■■■□□ 2.38
CLN6-205ENST00000564846 CARMIL2Q6F5E8 1435 aa29.87■■■□□ 2.37
CLN6-205ENST00000564846 HECW1Q76N89 1606 aa29.83■■■□□ 2.37
CLN6-205ENST00000564846 CCDC18Q5T9S5 1454 aa29.8■■■□□ 2.36
CLN6-205ENST00000564846 HRCP23327 699 aa29.77■■■□□ 2.36
CLN6-205ENST00000564846 LRRIQ1Q96JM4 1722 aa29.76■■■□□ 2.35
CLN6-205ENST00000564846 RRBP1Q9P2E9 1410 aaKnown RBP29.76■■■□□ 2.35
CLN6-205ENST00000564846 EPRSP07814 1512 aaKnown RBP29.71■■■□□ 2.35
CLN6-205ENST00000564846 MTUS2Q5JR59 1369 aa29.71■■■□□ 2.35
CLN6-205ENST00000564846 PRG4Q92954 1404 aaPredicted RBP29.69■■■□□ 2.34
CLN6-205ENST00000564846 RAPGEF6Q8TEU7 1601 aa29.68■■■□□ 2.34
CLN6-205ENST00000564846 SHROOM2Q13796 1616 aa29.68■■■□□ 2.34
CLN6-205ENST00000564846 CCNB3Q8WWL7 1395 aa29.67■■■□□ 2.34
CLN6-205ENST00000564846 EHBP1L1Q8N3D4 1523 aa29.66■■■□□ 2.34
CLN6-205ENST00000564846 PHLDB1Q86UU1 1377 aa29.64■■■□□ 2.34
CLN6-205ENST00000564846 NUP153P49790 1475 aaKnown RBP29.63■■■□□ 2.33
CLN6-205ENST00000564846 CLASP1Q7Z460 1538 aa29.63■■■□□ 2.33
CLN6-205ENST00000564846 CDK13Q14004 1512 aaKnown RBP29.59■■■□□ 2.33
CLN6-205ENST00000564846 HNRNPUL2Q1KMD3 747 aaKnown RBP29.59■■■□□ 2.33
CLN6-205ENST00000564846 PLB1Q6P1J6 1458 aa29.59■■■□□ 2.33
CLN6-205ENST00000564846 MAGI3Q5TCQ9 1506 aa29.56■■■□□ 2.32
CLN6-205ENST00000564846 SUPT6HQ7KZ85 1726 aaKnown RBP29.55■■■□□ 2.32
CLN6-205ENST00000564846 PTPRGP23470 1445 aa29.54■■■□□ 2.32
CLN6-205ENST00000564846 ABCA8O94911 1581 aa29.54■■■□□ 2.32
CLN6-205ENST00000564846 NCOA2Q15596 1464 aa29.53■■■□□ 2.32
CLN6-205ENST00000564846 CDK11AQ9UQ88 783 aaPredicted RBP29.51■■■□□ 2.31
CLN6-205ENST00000564846 ARID3CA6NKF2 412 aa29.49■■■□□ 2.31
CLN6-205ENST00000564846 ARHGEF11O15085 1522 aa29.49■■■□□ 2.31
CLN6-205ENST00000564846 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.47■■■□□ 2.31
CLN6-205ENST00000564846 ZEB1P37275 1124 aaPredicted RBP29.47■■■□□ 2.31
CLN6-205ENST00000564846 FGD6Q6ZV73 1430 aa29.45■■■□□ 2.3
CLN6-205ENST00000564846 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.44■■■□□ 2.3
CLN6-205ENST00000564846 MYOM3Q5VTT5 1437 aa29.44■■■□□ 2.3
CLN6-205ENST00000564846 ERCC6L2Q5T890 1561 aa29.42■■■□□ 2.3
CLN6-205ENST00000564846 FAM50AQ14320 339 aaKnown RBP29.39■■■□□ 2.29
CLN6-205ENST00000564846 CCER1Q8TC90 406 aaPredicted RBP29.39■■■□□ 2.29
CLN6-205ENST00000564846 UACAQ9BZF9 1416 aa29.38■■■□□ 2.29
CLN6-205ENST00000564846 TROQ12816 1431 aaPredicted RBP29.37■■■□□ 2.29
CLN6-205ENST00000564846 ATP10BO94823 1461 aa29.36■■■□□ 2.29
CLN6-205ENST00000564846 OSCARQ8IYS5 282 aa29.35■■■□□ 2.29
CLN6-205ENST00000564846 ITGAEP38570 1179 aa29.31■■■□□ 2.28
CLN6-205ENST00000564846 MIA2Q96PC5 1412 aa29.3■■■□□ 2.28
CLN6-205ENST00000564846 PLEKHD1A6NEE1 506 aa29.29■■■□□ 2.28
CLN6-205ENST00000564846 ABCC2Q92887 1545 aa29.27■■■□□ 2.28
CLN6-205ENST00000564846 ADCY10Q96PN6 1610 aa29.26■■■□□ 2.27
CLN6-205ENST00000564846 PTPN23Q9H3S7 1636 aa29.26■■■□□ 2.27
CLN6-205ENST00000564846 TCOF1Q13428 1488 aaKnown RBP29.25■■■□□ 2.27
CLN6-205ENST00000564846 UHRF1BP1LA0JNW5 1464 aa29.23■■■□□ 2.27
CLN6-205ENST00000564846 KIF14Q15058 1648 aa29.16■■■□□ 2.26
CLN6-205ENST00000564846 SETD5Q9C0A6 1442 aa29.14■■■□□ 2.26
CLN6-205ENST00000564846 ITSN2Q9NZM3 1697 aa29.12■■■□□ 2.25
CLN6-205ENST00000564846 GPATCH8Q9UKJ3 1502 aaKnown RBP29.11■■■□□ 2.25
CLN6-205ENST00000564846 KDM5BQ9UGL1 1544 aa29.09■■■□□ 2.25
CLN6-205ENST00000564846 ABCC10Q5T3U5 1492 aa29.09■■■□□ 2.25
CLN6-205ENST00000564846 RAB3GAP2Q9H2M9 1393 aa29.09■■■□□ 2.25
CLN6-205ENST00000564846 PTPRKQ15262 1439 aa29.08■■■□□ 2.25
CLN6-205ENST00000564846 CFDP1Q9UEE9 299 aaPredicted RBP29.06■■■□□ 2.24
CLN6-205ENST00000564846 ZCCHC11Q5TAX3 1644 aaKnown RBP29.04■■■□□ 2.24
CLN6-205ENST00000564846 DHX57Q6P158 1386 aaKnown RBP29.03■■■□□ 2.24
CLN6-205ENST00000564846 HFM1A2PYH4 1435 aa29.01■■■□□ 2.23
CLN6-205ENST00000564846 CLSPNQ9HAW4 1339 aa29.01■■■□□ 2.23
CLN6-205ENST00000564846 CAMSAP2Q08AD1 1489 aa28.98■■■□□ 2.23
CLN6-205ENST00000564846 CDC42BPAQ5VT25 1732 aa28.98■■■□□ 2.23
CLN6-205ENST00000564846 ZNF644Q9H582 1327 aaPredicted RBP28.97■■■□□ 2.23
CLN6-205ENST00000564846 DNMT1P26358 1616 aaKnown RBP28.96■■■□□ 2.23
CLN6-205ENST00000564846 AKNAQ7Z591 1439 aa28.95■■■□□ 2.23
CLN6-205ENST00000564846 DAPK1P53355 1430 aa28.95■■■□□ 2.22
CLN6-205ENST00000564846 NAIPQ13075 1403 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms