RNA–Protein interactions for RNA: ENST00000564529.1

SCAMP2-205, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-205ENST00000564529 KIF13AQ9H1H9 1805 aa25.85■■□□□ 1.73
SCAMP2-205ENST00000564529 FAM69CQ0P6D2 419 aa25.76■■□□□ 1.71
SCAMP2-205ENST00000564529 RUSC2Q8N2Y8 1516 aa25.73■■□□□ 1.71
SCAMP2-205ENST00000564529 ABCC10Q5T3U5 1492 aa25.72■■□□□ 1.71
SCAMP2-205ENST00000564529 NPM1P06748 294 aaKnown RBP eCLIP25.72■■□□□ 1.71
SCAMP2-205ENST00000564529 KIF27Q86VH2 1401 aa25.71■■□□□ 1.71
SCAMP2-205ENST00000564529 MAPKBP1O60336 1514 aa25.67■■□□□ 1.7
SCAMP2-205ENST00000564529 ADCY10Q96PN6 1610 aa25.64■■□□□ 1.7
SCAMP2-205ENST00000564529 IGF1RP08069 1367 aa25.64■■□□□ 1.69
SCAMP2-205ENST00000564529 DIP2BQ9P265 1576 aa25.63■■□□□ 1.69
SCAMP2-205ENST00000564529 KIAA0586Q9BVV6 1533 aa25.6■■□□□ 1.69
SCAMP2-205ENST00000564529 EEA1Q15075 1411 aa25.51■■□□□ 1.67
SCAMP2-205ENST00000564529 KDM4FA0A1W2PPD8 638 aa25.5■■□□□ 1.67
SCAMP2-205ENST00000564529 KDM6BO15054 1643 aa25.49■■□□□ 1.67
SCAMP2-205ENST00000564529 CUL7Q14999 1698 aa25.47■■□□□ 1.67
SCAMP2-205ENST00000564529 TSPOAP1O95153 1857 aa25.46■■□□□ 1.67
SCAMP2-205ENST00000564529 PTPRGP23470 1445 aa25.46■■□□□ 1.67
SCAMP2-205ENST00000564529 CARMIL1Q5VZK9 1371 aa25.44■■□□□ 1.66
SCAMP2-205ENST00000564529 TTBK1Q5TCY1 1321 aaPredicted RBP25.43■■□□□ 1.66
SCAMP2-205ENST00000564529 CSRNP3Q8WYN3 585 aa25.43■■□□□ 1.66
SCAMP2-205ENST00000564529 TNIKQ9UKE5 1360 aa25.37■■□□□ 1.65
SCAMP2-205ENST00000564529 PRXQ9BXM0 1461 aa25.36■■□□□ 1.65
SCAMP2-205ENST00000564529 ABCC2Q92887 1545 aa25.36■■□□□ 1.65
SCAMP2-205ENST00000564529 CARMIL2Q6F5E8 1435 aa25.35■■□□□ 1.65
SCAMP2-205ENST00000564529 ASXL2Q76L83 1435 aa25.32■■□□□ 1.64
SCAMP2-205ENST00000564529 RAPGEF2Q9Y4G8 1499 aa25.31■■□□□ 1.64
SCAMP2-205ENST00000564529 PLB1Q6P1J6 1458 aa25.29■■□□□ 1.64
SCAMP2-205ENST00000564529 IQGAP2Q13576 1575 aa25.27■■□□□ 1.64
SCAMP2-205ENST00000564529 GLI2P10070 1586 aa25.27■■□□□ 1.64
SCAMP2-205ENST00000564529 UHRF1BP1LA0JNW5 1464 aa25.26■■□□□ 1.63
SCAMP2-205ENST00000564529 FAM9AQ8IZU1 332 aaPredicted RBP25.25■■□□□ 1.63
SCAMP2-205ENST00000564529 PPRC1Q5VV67 1664 aaKnown RBP25.25■■□□□ 1.63
SCAMP2-205ENST00000564529 UACAQ9BZF9 1416 aa25.24■■□□□ 1.63
SCAMP2-205ENST00000564529 DISP1Q96F81 1524 aa25.22■■□□□ 1.63
SCAMP2-205ENST00000564529 COL17A1Q9UMD9 1497 aaPredicted RBP25.17■■□□□ 1.62
SCAMP2-205ENST00000564529 EPRSP07814 1512 aaKnown RBP25.16■■□□□ 1.62
SCAMP2-205ENST00000564529 KDM5BQ9UGL1 1544 aa25.16■■□□□ 1.62
SCAMP2-205ENST00000564529 ADGRL1O94910 1474 aa25.15■■□□□ 1.62
SCAMP2-205ENST00000564529 KIF21BO75037 1637 aa25.12■■□□□ 1.61
SCAMP2-205ENST00000564529 UGGT2Q9NYU1 1516 aa25.12■■□□□ 1.61
SCAMP2-205ENST00000564529 ILDR1Q86SU0 546 aaPredicted RBP25.11■■□□□ 1.61
SCAMP2-205ENST00000564529 MAP3K4Q9Y6R4 1608 aa25.1■■□□□ 1.61
SCAMP2-205ENST00000564529 ZCCHC11Q5TAX3 1644 aaKnown RBP25.08■■□□□ 1.6
SCAMP2-205ENST00000564529 TEX14Q8IWB6 1497 aa25.07■■□□□ 1.6
SCAMP2-205ENST00000564529 KIAA0556O60303 1618 aa25.05■■□□□ 1.6
SCAMP2-205ENST00000564529 GOLGA3Q08378 1498 aa25.01■■□□□ 1.59
SCAMP2-205ENST00000564529 WDR7Q9Y4E6 1490 aa25■■□□□ 1.59
SCAMP2-205ENST00000564529 HECW2Q9P2P5 1572 aa24.92■■□□□ 1.58
SCAMP2-205ENST00000564529 KCNH8Q96L42 1107 aa24.91■■□□□ 1.58
SCAMP2-205ENST00000564529 CTTNBP2Q8WZ74 1663 aa24.91■■□□□ 1.58
SCAMP2-205ENST00000564529 CD109Q6YHK3 1445 aa24.9■■□□□ 1.58
SCAMP2-205ENST00000564529 UBTFP17480 764 aaKnown RBP24.9■■□□□ 1.58
SCAMP2-205ENST00000564529 MAGI3Q5TCQ9 1506 aa24.88■■□□□ 1.57
SCAMP2-205ENST00000564529 ABCA8O94911 1581 aa24.86■■□□□ 1.57
SCAMP2-205ENST00000564529 CFAP43Q8NDM7 1665 aa24.84■■□□□ 1.57
SCAMP2-205ENST00000564529 EHMT2Q96KQ7 1210 aa24.8■■□□□ 1.56
SCAMP2-205ENST00000564529 LOC105371045A0A1W2PR82 267 aa24.77■■□□□ 1.56
SCAMP2-205ENST00000564529 ARID3CA6NKF2 412 aa24.73■■□□□ 1.55
SCAMP2-205ENST00000564529 SAMD9Q5K651 1589 aa24.71■■□□□ 1.55
SCAMP2-205ENST00000564529 ARAP3Q8WWN8 1544 aa24.7■■□□□ 1.54
SCAMP2-205ENST00000564529 P3H3Q8IVL6 736 aa24.69■■□□□ 1.54
SCAMP2-205ENST00000564529 ATP10BO94823 1461 aa24.68■■□□□ 1.54
SCAMP2-205ENST00000564529 EFCAB5A4FU69 1503 aa24.67■■□□□ 1.54
SCAMP2-205ENST00000564529 ARHGAP35Q9NRY4 1499 aa24.63■■□□□ 1.53
SCAMP2-205ENST00000564529 PHLDB1Q86UU1 1377 aa24.6■■□□□ 1.53
SCAMP2-205ENST00000564529 RAPGEF3O95398 923 aa24.6■■□□□ 1.53
SCAMP2-205ENST00000564529 RANGAP1P46060 587 aaPredicted RBP24.6■■□□□ 1.53
SCAMP2-205ENST00000564529 ABCA9Q8IUA7 1624 aa24.59■■□□□ 1.53
SCAMP2-205ENST00000564529 CLIP1P30622 1438 aa24.57■■□□□ 1.52
SCAMP2-205ENST00000564529 PTPRMP28827 1452 aa24.56■■□□□ 1.52
SCAMP2-205ENST00000564529 FHOD3Q2V2M9 1422 aa24.55■■□□□ 1.52
SCAMP2-205ENST00000564529 ADAMTSL3P82987 1691 aa24.54■■□□□ 1.52
SCAMP2-205ENST00000564529 CEP162Q5TB80 1403 aa24.53■■□□□ 1.52
SCAMP2-205ENST00000564529 NEO1Q92859 1461 aa24.52■■□□□ 1.52
SCAMP2-205ENST00000564529 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.51■■□□□ 1.51
SCAMP2-205ENST00000564529 HNRNPUL2Q1KMD3 747 aaKnown RBP24.51■■□□□ 1.51
SCAMP2-205ENST00000564529 FBXO41Q8TF61 875 aa24.51■■□□□ 1.51
SCAMP2-205ENST00000564529 RAPGEF6Q8TEU7 1601 aa24.5■■□□□ 1.51
SCAMP2-205ENST00000564529 FMN1Q68DA7 1419 aa24.48■■□□□ 1.51
SCAMP2-205ENST00000564529 FRMPD1Q5SYB0 1578 aa24.47■■□□□ 1.51
SCAMP2-205ENST00000564529 ARID4BQ4LE39 1312 aaPredicted RBP24.47■■□□□ 1.51
SCAMP2-205ENST00000564529 NUP153P49790 1475 aaKnown RBP24.45■■□□□ 1.5
SCAMP2-205ENST00000564529 BCORL1Q5H9F3 1711 aa24.44■■□□□ 1.5
SCAMP2-205ENST00000564529 MADDQ8WXG6 1647 aa24.41■■□□□ 1.5
SCAMP2-205ENST00000564529 PCF11O94913 1555 aaKnown RBP24.37■■□□□ 1.49
SCAMP2-205ENST00000564529 PLEKHD1A6NEE1 506 aa24.37■■□□□ 1.49
SCAMP2-205ENST00000564529 LMTK3Q96Q04 1460 aa24.37■■□□□ 1.49
SCAMP2-205ENST00000564529 DENND4BO75064 1496 aaPredicted RBP24.36■■□□□ 1.49
SCAMP2-205ENST00000564529 ARHGEF40Q8TER5 1519 aa24.35■■□□□ 1.49
SCAMP2-205ENST00000564529 AKNAQ7Z591 1439 aa24.35■■□□□ 1.49
SCAMP2-205ENST00000564529 CASKIN1Q8WXD9 1431 aa24.34■■□□□ 1.49
SCAMP2-205ENST00000564529 RICTORQ6R327 1708 aa24.31■■□□□ 1.48
SCAMP2-205ENST00000564529 FANCAO15360 1455 aa24.31■■□□□ 1.48
SCAMP2-205ENST00000564529 RIMS1Q86UR5 1692 aaKnown RBP24.3■■□□□ 1.48
SCAMP2-205ENST00000564529 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.29■■□□□ 1.48
SCAMP2-205ENST00000564529 HSPA2P54652 639 aa24.27■■□□□ 1.48
SCAMP2-205ENST00000564529 PLPPR3Q6T4P5 718 aa24.26■■□□□ 1.47
SCAMP2-205ENST00000564529 VPS8Q8N3P4 1428 aa24.26■■□□□ 1.47
SCAMP2-205ENST00000564529 YEATS2Q9ULM3 1422 aa24.25■■□□□ 1.47
SCAMP2-205ENST00000564529 FYCO1Q9BQS8 1478 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms