RNA–Protein interactions for RNA: ENST00000563995.1

SLX1A-204, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 3

Gene SLX1A, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-204ENST00000563995 PRG4Q92954 1404 aaPredicted RBP33.26■■■□□ 2.91
SLX1A-204ENST00000563995 JPH4Q96JJ6 628 aa33.16■■■□□ 2.9
SLX1A-204ENST00000563995 KDM4FA0A1W2PPD8 638 aa33.13■■■□□ 2.89
SLX1A-204ENST00000563995 ADCY10Q96PN6 1610 aa33.04■■■□□ 2.88
SLX1A-204ENST00000563995 MAPKBP1O60336 1514 aa33.03■■■□□ 2.88
SLX1A-204ENST00000563995 CUL7Q14999 1698 aa33.03■■■□□ 2.88
SLX1A-204ENST00000563995 FAM69CQ0P6D2 419 aa33■■■□□ 2.87
SLX1A-204ENST00000563995 ABCC10Q5T3U5 1492 aa32.99■■■□□ 2.87
SLX1A-204ENST00000563995 KIF27Q86VH2 1401 aa32.98■■■□□ 2.87
SLX1A-204ENST00000563995 DIP2BQ9P265 1576 aa32.98■■■□□ 2.87
SLX1A-204ENST00000563995 KIAA0586Q9BVV6 1533 aa32.97■■■□□ 2.87
SLX1A-204ENST00000563995 IGF1RP08069 1367 aa32.95■■■□□ 2.86
SLX1A-204ENST00000563995 CHIC1Q5VXU3 224 aa32.9■■■□□ 2.86
SLX1A-204ENST00000563995 KDM6BO15054 1643 aa32.88■■■□□ 2.85
SLX1A-204ENST00000563995 NPM1P06748 294 aaKnown RBP eCLIP32.84■■■□□ 2.85
SLX1A-204ENST00000563995 TSPOAP1O95153 1857 aa32.78■■■□□ 2.84
SLX1A-204ENST00000563995 CARMIL1Q5VZK9 1371 aa32.71■■■□□ 2.83
SLX1A-204ENST00000563995 IQGAP2Q13576 1575 aa32.67■■■□□ 2.82
SLX1A-204ENST00000563995 PTPRGP23470 1445 aa32.67■■■□□ 2.82
SLX1A-204ENST00000563995 ABCC2Q92887 1545 aa32.61■■■□□ 2.81
SLX1A-204ENST00000563995 TNIKQ9UKE5 1360 aa32.61■■■□□ 2.81
SLX1A-204ENST00000563995 CARMIL2Q6F5E8 1435 aa32.6■■■□□ 2.81
SLX1A-204ENST00000563995 PPRC1Q5VV67 1664 aaKnown RBP32.58■■■□□ 2.81
SLX1A-204ENST00000563995 ADGRL1O94910 1474 aa32.57■■■□□ 2.8
SLX1A-204ENST00000563995 EEA1Q15075 1411 aa32.56■■■□□ 2.8
SLX1A-204ENST00000563995 UHRF1BP1LA0JNW5 1464 aa32.54■■■□□ 2.8
SLX1A-204ENST00000563995 GLI2P10070 1586 aa32.53■■■□□ 2.8
SLX1A-204ENST00000563995 DISP1Q96F81 1524 aa32.53■■■□□ 2.8
SLX1A-204ENST00000563995 HECW2Q9P2P5 1572 aa32.53■■■□□ 2.8
SLX1A-204ENST00000563995 ASXL2Q76L83 1435 aa32.51■■■□□ 2.79
SLX1A-204ENST00000563995 TTBK1Q5TCY1 1321 aaPredicted RBP32.49■■■□□ 2.79
SLX1A-204ENST00000563995 PLB1Q6P1J6 1458 aa32.48■■■□□ 2.79
SLX1A-204ENST00000563995 RAPGEF2Q9Y4G8 1499 aa32.47■■■□□ 2.79
SLX1A-204ENST00000563995 UACAQ9BZF9 1416 aa32.45■■■□□ 2.79
SLX1A-204ENST00000563995 UGGT2Q9NYU1 1516 aa32.45■■■□□ 2.78
SLX1A-204ENST00000563995 CSRNP3Q8WYN3 585 aa32.44■■■□□ 2.78
SLX1A-204ENST00000563995 PRXQ9BXM0 1461 aa32.43■■■□□ 2.78
SLX1A-204ENST00000563995 KIAA0556O60303 1618 aa32.4■■■□□ 2.78
SLX1A-204ENST00000563995 KDM5BQ9UGL1 1544 aa32.4■■■□□ 2.78
SLX1A-204ENST00000563995 ZCCHC11Q5TAX3 1644 aaKnown RBP32.39■■■□□ 2.78
SLX1A-204ENST00000563995 MAP3K4Q9Y6R4 1608 aa32.39■■■□□ 2.78
SLX1A-204ENST00000563995 FAM9AQ8IZU1 332 aaPredicted RBP32.38■■■□□ 2.77
SLX1A-204ENST00000563995 EPRSP07814 1512 aaKnown RBP32.34■■■□□ 2.77
SLX1A-204ENST00000563995 CTTNBP2Q8WZ74 1663 aa32.34■■■□□ 2.77
SLX1A-204ENST00000563995 FBXO41Q8TF61 875 aa32.3■■■□□ 2.76
SLX1A-204ENST00000563995 COL17A1Q9UMD9 1497 aaPredicted RBP32.25■■■□□ 2.75
SLX1A-204ENST00000563995 KIF21BO75037 1637 aa32.21■■■□□ 2.75
SLX1A-204ENST00000563995 TEX14Q8IWB6 1497 aa32.2■■■□□ 2.75
SLX1A-204ENST00000563995 WDR7Q9Y4E6 1490 aa32.16■■■□□ 2.74
SLX1A-204ENST00000563995 ABCA8O94911 1581 aa32.12■■■□□ 2.73
SLX1A-204ENST00000563995 GOLGA3Q08378 1498 aa32.1■■■□□ 2.73
SLX1A-204ENST00000563995 CFAP43Q8NDM7 1665 aa32.09■■■□□ 2.73
SLX1A-204ENST00000563995 MAGI3Q5TCQ9 1506 aa32■■■□□ 2.71
SLX1A-204ENST00000563995 CD109Q6YHK3 1445 aa31.94■■■□□ 2.7
SLX1A-204ENST00000563995 EHMT2Q96KQ7 1210 aa31.92■■■□□ 2.7
SLX1A-204ENST00000563995 UBTFP17480 764 aaKnown RBP31.87■■■□□ 2.69
SLX1A-204ENST00000563995 KCNH8Q96L42 1107 aa31.84■■■□□ 2.69
SLX1A-204ENST00000563995 LMTK3Q96Q04 1460 aa31.83■■■□□ 2.69
SLX1A-204ENST00000563995 SAMD9Q5K651 1589 aa31.81■■■□□ 2.68
SLX1A-204ENST00000563995 ABCA9Q8IUA7 1624 aa31.78■■■□□ 2.68
SLX1A-204ENST00000563995 ATP10BO94823 1461 aa31.78■■■□□ 2.68
SLX1A-204ENST00000563995 ARAP3Q8WWN8 1544 aa31.76■■■□□ 2.68
SLX1A-204ENST00000563995 RAPGEF6Q8TEU7 1601 aa31.71■■■□□ 2.67
SLX1A-204ENST00000563995 RANGAP1P46060 587 aaPredicted RBP31.7■■■□□ 2.67
SLX1A-204ENST00000563995 P3H3Q8IVL6 736 aa31.68■■■□□ 2.66
SLX1A-204ENST00000563995 EFCAB5A4FU69 1503 aa31.68■■■□□ 2.66
SLX1A-204ENST00000563995 ARID3CA6NKF2 412 aa31.66■■■□□ 2.66
SLX1A-204ENST00000563995 PHLDB1Q86UU1 1377 aa31.6■■■□□ 2.65
SLX1A-204ENST00000563995 PTPRMP28827 1452 aa31.59■■■□□ 2.65
SLX1A-204ENST00000563995 FHOD3Q2V2M9 1422 aa31.58■■■□□ 2.65
SLX1A-204ENST00000563995 ADAMTSL3P82987 1691 aa31.57■■■□□ 2.65
SLX1A-204ENST00000563995 FRMPD1Q5SYB0 1578 aa31.57■■■□□ 2.64
SLX1A-204ENST00000563995 NUP153P49790 1475 aaKnown RBP31.56■■■□□ 2.64
SLX1A-204ENST00000563995 NEO1Q92859 1461 aa31.56■■■□□ 2.64
SLX1A-204ENST00000563995 ARHGAP35Q9NRY4 1499 aa31.56■■■□□ 2.64
SLX1A-204ENST00000563995 LOC105371045A0A1W2PR82 267 aa31.52■■■□□ 2.64
SLX1A-204ENST00000563995 SOCS7O14512 581 aa31.52■■■□□ 2.64
SLX1A-204ENST00000563995 PCF11O94913 1555 aaKnown RBP31.49■■■□□ 2.63
SLX1A-204ENST00000563995 BCORL1Q5H9F3 1711 aa31.49■■■□□ 2.63
SLX1A-204ENST00000563995 ILDR2Q71H61 639 aa31.47■■■□□ 2.63
SLX1A-204ENST00000563995 RAPGEF3O95398 923 aa31.45■■■□□ 2.63
SLX1A-204ENST00000563995 CLIP1P30622 1438 aa31.45■■■□□ 2.63
SLX1A-204ENST00000563995 RICTORQ6R327 1708 aa31.44■■■□□ 2.62
SLX1A-204ENST00000563995 DISP3Q9P2K9 1392 aa31.42■■■□□ 2.62
SLX1A-204ENST00000563995 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.4■■■□□ 2.62
SLX1A-204ENST00000563995 HNRNPUL2Q1KMD3 747 aaKnown RBP31.4■■■□□ 2.62
SLX1A-204ENST00000563995 ARHGEF40Q8TER5 1519 aa31.39■■■□□ 2.62
SLX1A-204ENST00000563995 MADDQ8WXG6 1647 aa31.39■■■□□ 2.62
SLX1A-204ENST00000563995 CEP162Q5TB80 1403 aa31.38■■■□□ 2.61
SLX1A-204ENST00000563995 CFAP74Q9C0B2 1584 aa31.37■■■□□ 2.61
SLX1A-204ENST00000563995 FMN1Q68DA7 1419 aa31.36■■■□□ 2.61
SLX1A-204ENST00000563995 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.35■■■□□ 2.61
SLX1A-204ENST00000563995 TTC37Q6PGP7 1564 aa31.34■■■□□ 2.61
SLX1A-204ENST00000563995 CERKQ8TCT0 537 aa31.34■■■□□ 2.61
SLX1A-204ENST00000563995 DENND4BO75064 1496 aaPredicted RBP31.3■■■□□ 2.6
SLX1A-204ENST00000563995 FANCAO15360 1455 aa31.29■■■□□ 2.6
SLX1A-204ENST00000563995 AKNAQ7Z591 1439 aa31.29■■■□□ 2.6
SLX1A-204ENST00000563995 RIMS1Q86UR5 1692 aaKnown RBP31.29■■■□□ 2.6
SLX1A-204ENST00000563995 ZMYM4Q5VZL5 1548 aa31.28■■■□□ 2.6
SLX1A-204ENST00000563995 PLEKHD1A6NEE1 506 aa31.27■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms