RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 KIF27Q86VH2 1401 aa36.51■■■■□ 3.44
HERC2-204ENST00000563945 RUSC2Q8N2Y8 1516 aa36.49■■■■□ 3.43
HERC2-204ENST00000563945 IGF1RP08069 1367 aa36.47■■■■□ 3.43
HERC2-204ENST00000563945 KIAA0586Q9BVV6 1533 aa36.41■■■■□ 3.42
HERC2-204ENST00000563945 FAM69CQ0P6D2 419 aa36.38■■■■□ 3.41
HERC2-204ENST00000563945 CUL7Q14999 1698 aa36.36■■■■□ 3.41
HERC2-204ENST00000563945 KIF13AQ9H1H9 1805 aa36.34■■■■□ 3.41
HERC2-204ENST00000563945 CARMIL1Q5VZK9 1371 aa36.28■■■■□ 3.4
HERC2-204ENST00000563945 ABCC10Q5T3U5 1492 aa36.26■■■■□ 3.4
HERC2-204ENST00000563945 MAPKBP1O60336 1514 aa36.23■■■■□ 3.39
HERC2-204ENST00000563945 TTBK1Q5TCY1 1321 aaPredicted RBP36.22■■■■□ 3.39
HERC2-204ENST00000563945 ADCY10Q96PN6 1610 aa36.21■■■■□ 3.39
HERC2-204ENST00000563945 PTPRGP23470 1445 aa36.18■■■■□ 3.38
HERC2-204ENST00000563945 CARMIL2Q6F5E8 1435 aa36.16■■■■□ 3.38
HERC2-204ENST00000563945 DIP2BQ9P265 1576 aa36.1■■■■□ 3.37
HERC2-204ENST00000563945 TNIKQ9UKE5 1360 aa36.07■■■■□ 3.36
HERC2-204ENST00000563945 IQGAP2Q13576 1575 aa36.01■■■■□ 3.35
HERC2-204ENST00000563945 TSPOAP1O95153 1857 aa35.93■■■■□ 3.34
HERC2-204ENST00000563945 ABCC2Q92887 1545 aa35.92■■■■□ 3.34
HERC2-204ENST00000563945 KDM6BO15054 1643 aa35.9■■■■□ 3.34
HERC2-204ENST00000563945 RAPGEF2Q9Y4G8 1499 aa35.9■■■■□ 3.34
HERC2-204ENST00000563945 UACAQ9BZF9 1416 aa35.86■■■■□ 3.33
HERC2-204ENST00000563945 PLB1Q6P1J6 1458 aa35.86■■■■□ 3.33
HERC2-204ENST00000563945 ASXL2Q76L83 1435 aa35.84■■■■□ 3.33
HERC2-204ENST00000563945 UHRF1BP1LA0JNW5 1464 aa35.82■■■■□ 3.32
HERC2-204ENST00000563945 DISP1Q96F81 1524 aa35.81■■■■□ 3.32
HERC2-204ENST00000563945 UGGT2Q9NYU1 1516 aa35.74■■■■□ 3.31
HERC2-204ENST00000563945 GLI2P10070 1586 aa35.7■■■■□ 3.31
HERC2-204ENST00000563945 KDM4FA0A1W2PPD8 638 aa35.65■■■■□ 3.3
HERC2-204ENST00000563945 KDM5BQ9UGL1 1544 aa35.65■■■■□ 3.3
HERC2-204ENST00000563945 KIAA0556O60303 1618 aa35.64■■■■□ 3.3
HERC2-204ENST00000563945 EPRSP07814 1512 aaKnown RBP35.59■■■■□ 3.29
HERC2-204ENST00000563945 GOLGA3Q08378 1498 aa35.56■■■■□ 3.28
HERC2-204ENST00000563945 ZCCHC11Q5TAX3 1644 aaKnown RBP35.55■■■■□ 3.28
HERC2-204ENST00000563945 FAM9AQ8IZU1 332 aaPredicted RBP35.55■■■■□ 3.28
HERC2-204ENST00000563945 TEX14Q8IWB6 1497 aa35.53■■■■□ 3.28
HERC2-204ENST00000563945 PPRC1Q5VV67 1664 aaKnown RBP35.52■■■■□ 3.28
HERC2-204ENST00000563945 CTTNBP2Q8WZ74 1663 aa35.52■■■■□ 3.28
HERC2-204ENST00000563945 MAP3K4Q9Y6R4 1608 aa35.46■■■■□ 3.27
HERC2-204ENST00000563945 WDR7Q9Y4E6 1490 aa35.45■■■■□ 3.27
HERC2-204ENST00000563945 KCNH8Q96L42 1107 aa35.44■■■■□ 3.26
HERC2-204ENST00000563945 PRXQ9BXM0 1461 aa35.41■■■■□ 3.26
HERC2-204ENST00000563945 COL17A1Q9UMD9 1497 aaPredicted RBP35.38■■■■□ 3.25
HERC2-204ENST00000563945 CD109Q6YHK3 1445 aa35.32■■■■□ 3.25
HERC2-204ENST00000563945 ABCA8O94911 1581 aa35.32■■■■□ 3.24
HERC2-204ENST00000563945 P3H3Q8IVL6 736 aa35.31■■■■□ 3.24
HERC2-204ENST00000563945 ADGRL1O94910 1474 aa35.3■■■■□ 3.24
HERC2-204ENST00000563945 CSRNP3Q8WYN3 585 aa35.26■■■■□ 3.24
HERC2-204ENST00000563945 ARID3CA6NKF2 412 aa35.23■■■■□ 3.23
HERC2-204ENST00000563945 MAGI3Q5TCQ9 1506 aa35.22■■■■□ 3.23
HERC2-204ENST00000563945 CFAP43Q8NDM7 1665 aa35.21■■■■□ 3.23
HERC2-204ENST00000563945 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.12■■■■□ 3.21
HERC2-204ENST00000563945 HNRNPUL2Q1KMD3 747 aaKnown RBP35.12■■■■□ 3.21
HERC2-204ENST00000563945 ATP10BO94823 1461 aa35.09■■■■□ 3.21
HERC2-204ENST00000563945 RANGAP1P46060 587 aaPredicted RBP35.07■■■■□ 3.2
HERC2-204ENST00000563945 EEA1Q15075 1411 aa35.01■■■■□ 3.2
HERC2-204ENST00000563945 SAMD9Q5K651 1589 aa34.97■■■■□ 3.19
HERC2-204ENST00000563945 PHLDB1Q86UU1 1377 aa34.97■■■■□ 3.19
HERC2-204ENST00000563945 ARAP3Q8WWN8 1544 aa34.95■■■■□ 3.19
HERC2-204ENST00000563945 RAPGEF6Q8TEU7 1601 aa34.95■■■■□ 3.18
HERC2-204ENST00000563945 ABCA9Q8IUA7 1624 aa34.89■■■■□ 3.18
HERC2-204ENST00000563945 PLEKHD1A6NEE1 506 aa34.86■■■■□ 3.17
HERC2-204ENST00000563945 HECW2Q9P2P5 1572 aa34.84■■■■□ 3.17
HERC2-204ENST00000563945 FHOD3Q2V2M9 1422 aa34.84■■■■□ 3.17
HERC2-204ENST00000563945 RAPGEF3O95398 923 aa34.84■■■■□ 3.17
HERC2-204ENST00000563945 KIF21BO75037 1637 aa34.82■■■■□ 3.16
HERC2-204ENST00000563945 NEO1Q92859 1461 aa34.81■■■■□ 3.16
HERC2-204ENST00000563945 NUP153P49790 1475 aaKnown RBP34.8■■■■□ 3.16
HERC2-204ENST00000563945 ILDR1Q86SU0 546 aaPredicted RBP34.8■■■■□ 3.16
HERC2-204ENST00000563945 ARID4BQ4LE39 1312 aaPredicted RBP34.73■■■■□ 3.15
HERC2-204ENST00000563945 EFCAB5A4FU69 1503 aa34.67■■■■□ 3.14
HERC2-204ENST00000563945 UBTFP17480 764 aaKnown RBP34.65■■■■□ 3.14
HERC2-204ENST00000563945 EHMT2Q96KQ7 1210 aa34.64■■■■□ 3.14
HERC2-204ENST00000563945 ATP1B4Q9UN42 357 aaPredicted RBP34.61■■■■□ 3.13
HERC2-204ENST00000563945 DENND4BO75064 1496 aaPredicted RBP34.6■■■■□ 3.13
HERC2-204ENST00000563945 AKNAQ7Z591 1439 aa34.59■■■■□ 3.13
HERC2-204ENST00000563945 PTPRMP28827 1452 aa34.57■■■■□ 3.12
HERC2-204ENST00000563945 FANCAO15360 1455 aa34.56■■■■□ 3.12
HERC2-204ENST00000563945 ADAMTSL3P82987 1691 aa34.54■■■■□ 3.12
HERC2-204ENST00000563945 FRMPD1Q5SYB0 1578 aa34.53■■■■□ 3.12
HERC2-204ENST00000563945 CFAP74Q9C0B2 1584 aa34.53■■■■□ 3.12
HERC2-204ENST00000563945 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.52■■■■□ 3.126e-6■■■■■ 38.2
HERC2-204ENST00000563945 CDK11AQ9UQ88 783 aaPredicted RBP34.48■■■■□ 3.11
HERC2-204ENST00000563945 BCORL1Q5H9F3 1711 aa34.47■■■■□ 3.11
HERC2-204ENST00000563945 CDK13Q14004 1512 aaKnown RBP34.46■■■■□ 3.11
HERC2-204ENST00000563945 FMN1Q68DA7 1419 aa34.46■■■■□ 3.11
HERC2-204ENST00000563945 TTC37Q6PGP7 1564 aa34.44■■■■□ 3.1
HERC2-204ENST00000563945 ARHGEF40Q8TER5 1519 aa34.43■■■■□ 3.1
HERC2-204ENST00000563945 RICTORQ6R327 1708 aa34.42■■■■□ 3.1
HERC2-204ENST00000563945 POGZQ7Z3K3 1410 aa34.42■■■■□ 3.1
HERC2-204ENST00000563945 MADDQ8WXG6 1647 aa34.4■■■■□ 3.1
HERC2-204ENST00000563945 CHIC1Q5VXU3 224 aa34.39■■■■□ 3.1
HERC2-204ENST00000563945 PLCH2O75038 1416 aa34.38■■■■□ 3.09
HERC2-204ENST00000563945 EFCAB2Q5VUJ9 269 aa34.37■■■■□ 3.09
HERC2-204ENST00000563945 PLPPR3Q6T4P5 718 aa34.36■■■■□ 3.09
HERC2-204ENST00000563945 SCAPERQ9BY12 1400 aa34.36■■■■□ 3.09
HERC2-204ENST00000563945 HECW1Q76N89 1606 aa34.35■■■■□ 3.09
HERC2-204ENST00000563945 ZFYVE16Q7Z3T8 1539 aa34.35■■■■□ 3.09
HERC2-204ENST00000563945 MAGI2Q86UL8 1455 aa34.34■■■■□ 3.09
HERC2-204ENST00000563945 ZMYM4Q5VZL5 1548 aa34.32■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms