RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 KDM6BO15054 1643 aa14.46□□□□□ -0.09
HERPUD1-206ENST00000563343 FHAD1B1AJZ9 1412 aa14.45□□□□□ -0.1
HERPUD1-206ENST00000563343 BIVM-ERCC5R4GMW8 1640 aa14.44□□□□□ -0.1
HERPUD1-206ENST00000563343 ADCY10Q96PN6 1610 aa14.44□□□□□ -0.1
HERPUD1-206ENST00000563343 TSPOAP1O95153 1857 aa14.44□□□□□ -0.1
HERPUD1-206ENST00000563343 PRG4Q92954 1404 aaPredicted RBP14.42□□□□□ -0.1
HERPUD1-206ENST00000563343 ERICH3Q5RHP9 1530 aa14.42□□□□□ -0.1
HERPUD1-206ENST00000563343 RUSC2Q8N2Y8 1516 aa14.41□□□□□ -0.1
HERPUD1-206ENST00000563343 FAM69CQ0P6D2 419 aa14.4□□□□□ -0.1
HERPUD1-206ENST00000563343 TOP2BQ02880 1626 aa14.39□□□□□ -0.11
HERPUD1-206ENST00000563343 WRNQ14191 1432 aaPredicted RBP eCLIP14.38□□□□□ -0.11
HERPUD1-206ENST00000563343 JPH4Q96JJ6 628 aa14.35□□□□□ -0.11
HERPUD1-206ENST00000563343 PPRC1Q5VV67 1664 aaKnown RBP14.34□□□□□ -0.11
HERPUD1-206ENST00000563343 NPM1P06748 294 aaKnown RBP eCLIP14.27□□□□□ -0.13
HERPUD1-206ENST00000563343 HECW2Q9P2P5 1572 aa14.26□□□□□ -0.13
HERPUD1-206ENST00000563343 ADGRL1O94910 1474 aa14.26□□□□□ -0.13
HERPUD1-206ENST00000563343 GLI2P10070 1586 aa14.23□□□□□ -0.13
HERPUD1-206ENST00000563343 FOXD1Q16676 465 aa14.21□□□□□ -0.13
HERPUD1-206ENST00000563343 KIAA0586Q9BVV6 1533 aa14.2□□□□□ -0.14
HERPUD1-206ENST00000563343 CUL7Q14999 1698 aa14.2□□□□□ -0.14
HERPUD1-206ENST00000563343 COL17A1Q9UMD9 1497 aaPredicted RBP14.18□□□□□ -0.14
HERPUD1-206ENST00000563343 PLPPR3Q6T4P5 718 aa14.18□□□□□ -0.14
HERPUD1-206ENST00000563343 MAP3K4Q9Y6R4 1608 aa14.18□□□□□ -0.14
HERPUD1-206ENST00000563343 ABCC2Q92887 1545 aa14.16□□□□□ -0.14
HERPUD1-206ENST00000563343 ASXL2Q76L83 1435 aa14.14□□□□□ -0.15
HERPUD1-206ENST00000563343 PLB1Q6P1J6 1458 aa14.12□□□□□ -0.15
HERPUD1-206ENST00000563343 PTPRGP23470 1445 aa14.11□□□□□ -0.15
HERPUD1-206ENST00000563343 UHRF1BP1LA0JNW5 1464 aa14.1□□□□□ -0.15
HERPUD1-206ENST00000563343 EPRSP07814 1512 aaKnown RBP14.08□□□□□ -0.16
HERPUD1-206ENST00000563343 IGF1RP08069 1367 aa14.08□□□□□ -0.16
HERPUD1-206ENST00000563343 ZCCHC11Q5TAX3 1644 aaKnown RBP14.07□□□□□ -0.16
HERPUD1-206ENST00000563343 TNIKQ9UKE5 1360 aa14.07□□□□□ -0.16
HERPUD1-206ENST00000563343 KDM5BQ9UGL1 1544 aa14.05□□□□□ -0.16
HERPUD1-206ENST00000563343 TEX14Q8IWB6 1497 aa14.04□□□□□ -0.16
HERPUD1-206ENST00000563343 IQGAP2Q13576 1575 aa14.04□□□□□ -0.16
HERPUD1-206ENST00000563343 DISP1Q96F81 1524 aa14.02□□□□□ -0.16
HERPUD1-206ENST00000563343 UACAQ9BZF9 1416 aa14.02□□□□□ -0.16
HERPUD1-206ENST00000563343 CARMIL2Q6F5E8 1435 aa14.01□□□□□ -0.17
HERPUD1-206ENST00000563343 FBXO41Q8TF61 875 aa14.01□□□□□ -0.17
HERPUD1-206ENST00000563343 KIF21BO75037 1637 aa14□□□□□ -0.17
HERPUD1-206ENST00000563343 KIF27Q86VH2 1401 aa13.99□□□□□ -0.17
HERPUD1-206ENST00000563343 TTBK1Q5TCY1 1321 aaPredicted RBP13.99□□□□□ -0.17
HERPUD1-206ENST00000563343 SUPT5HO00267 1087 aaKnown RBP13.98□□□□□ -0.17
HERPUD1-206ENST00000563343 CFAP43Q8NDM7 1665 aa13.98□□□□□ -0.17
HERPUD1-206ENST00000563343 CARMIL1Q5VZK9 1371 aa13.95□□□□□ -0.18
HERPUD1-206ENST00000563343 MAGI3Q5TCQ9 1506 aa13.94□□□□□ -0.18
HERPUD1-206ENST00000563343 UGGT2Q9NYU1 1516 aa13.94□□□□□ -0.18
HERPUD1-206ENST00000563343 KIAA0556O60303 1618 aa13.93□□□□□ -0.18
HERPUD1-206ENST00000563343 WDR7Q9Y4E6 1490 aa13.93□□□□□ -0.18
HERPUD1-206ENST00000563343 ADAMTSL3P82987 1691 aa13.93□□□□□ -0.18
HERPUD1-206ENST00000563343 CD109Q6YHK3 1445 aa13.87□□□□□ -0.19
HERPUD1-206ENST00000563343 PTPRMP28827 1452 aa13.86□□□□□ -0.19
HERPUD1-206ENST00000563343 ABCA8O94911 1581 aa13.85□□□□□ -0.19
HERPUD1-206ENST00000563343 ARAP3Q8WWN8 1544 aa13.85□□□□□ -0.19
HERPUD1-206ENST00000563343 BCORL1Q5H9F3 1711 aa13.84□□□□□ -0.19
HERPUD1-206ENST00000563343 CTTNBP2Q8WZ74 1663 aa13.84□□□□□ -0.19
HERPUD1-206ENST00000563343 PCF11O94913 1555 aaKnown RBP13.83□□□□□ -0.2
HERPUD1-206ENST00000563343 LMTK3Q96Q04 1460 aa13.81□□□□□ -0.2
HERPUD1-206ENST00000563343 MADDQ8WXG6 1647 aa13.81□□□□□ -0.2
HERPUD1-206ENST00000563343 RAPGEF2Q9Y4G8 1499 aa13.79□□□□□ -0.2
HERPUD1-206ENST00000563343 FRMPD1Q5SYB0 1578 aa13.78□□□□□ -0.2
HERPUD1-206ENST00000563343 ABCA9Q8IUA7 1624 aa13.77□□□□□ -0.21
HERPUD1-206ENST00000563343 KCNH8Q96L42 1107 aa13.75□□□□□ -0.21
HERPUD1-206ENST00000563343 RIMS1Q86UR5 1692 aaKnown RBP13.75□□□□□ -0.21
HERPUD1-206ENST00000563343 GOLGA3Q08378 1498 aa13.71□□□□□ -0.21
HERPUD1-206ENST00000563343 SIGLEC1Q9BZZ2 1709 aa13.7□□□□□ -0.22
HERPUD1-206ENST00000563343 RICTORQ6R327 1708 aa13.7□□□□□ -0.22
HERPUD1-206ENST00000563343 PHLDB1Q86UU1 1377 aa13.7□□□□□ -0.22
HERPUD1-206ENST00000563343 ARHGEF40Q8TER5 1519 aa13.69□□□□□ -0.22
HERPUD1-206ENST00000563343 ATP10BO94823 1461 aa13.68□□□□□ -0.22
HERPUD1-206ENST00000563343 NEO1Q92859 1461 aa13.67□□□□□ -0.22
HERPUD1-206ENST00000563343 RAPGEF3O95398 923 aa13.67□□□□□ -0.22
HERPUD1-206ENST00000563343 ILDR2Q71H61 639 aa13.67□□□□□ -0.22
HERPUD1-206ENST00000563343 HSPA2P54652 639 aa13.63□□□□□ -0.23
HERPUD1-206ENST00000563343 CERKQ8TCT0 537 aa13.63□□□□□ -0.23
HERPUD1-206ENST00000563343 SOCS7O14512 581 aa13.62□□□□□ -0.23
HERPUD1-206ENST00000563343 FER1L4A9Z1Z3 1794 aa13.62□□□□□ -0.23
HERPUD1-206ENST00000563343 TTC37Q6PGP7 1564 aa13.6□□□□□ -0.23
HERPUD1-206ENST00000563343 STRCQ7RTU9 1775 aa13.6□□□□□ -0.23
HERPUD1-206ENST00000563343 RAPGEF6Q8TEU7 1601 aa13.6□□□□□ -0.23
HERPUD1-206ENST00000563343 ZMYM4Q5VZL5 1548 aa13.59□□□□□ -0.23
HERPUD1-206ENST00000563343 PREX1Q8TCU6 1659 aa13.59□□□□□ -0.23
HERPUD1-206ENST00000563343 SAMD9Q5K651 1589 aa13.58□□□□□ -0.23
HERPUD1-206ENST00000563343 ARID4BQ4LE39 1312 aaPredicted RBP13.58□□□□□ -0.24
HERPUD1-206ENST00000563343 DISP3Q9P2K9 1392 aa13.58□□□□□ -0.24
HERPUD1-206ENST00000563343 PRXQ9BXM0 1461 aa13.57□□□□□ -0.24
HERPUD1-206ENST00000563343 ARID3CA6NKF2 412 aa13.57□□□□□ -0.24
HERPUD1-206ENST00000563343 PPP6R1Q9UPN7 881 aa13.57□□□□□ -0.24
HERPUD1-206ENST00000563343 SPATA31D1Q6ZQQ2 1576 aa13.57□□□□□ -0.24
HERPUD1-206ENST00000563343 FHOD3Q2V2M9 1422 aa13.56□□□□□ -0.24
HERPUD1-206ENST00000563343 ADRA2BP18089 450 aa13.56□□□□□ -0.24
HERPUD1-206ENST00000563343 CFAP74Q9C0B2 1584 aa13.56□□□□□ -0.24
HERPUD1-206ENST00000563343 DENND4BO75064 1496 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-206ENST00000563343 FANCAO15360 1455 aa13.55□□□□□ -0.24
HERPUD1-206ENST00000563343 ZFYVE16Q7Z3T8 1539 aa13.54□□□□□ -0.24
HERPUD1-206ENST00000563343 YEATS2Q9ULM3 1422 aa13.53□□□□□ -0.24
HERPUD1-206ENST00000563343 EFCAB5A4FU69 1503 aa13.53□□□□□ -0.24
HERPUD1-206ENST00000563343 AKNAQ7Z591 1439 aa13.52□□□□□ -0.25
HERPUD1-206ENST00000563343 NUP153P49790 1475 aaKnown RBP13.52□□□□□ -0.25
HERPUD1-206ENST00000563343 HECW1Q76N89 1606 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms