RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 RUSC2Q8N2Y8 1516 aa27.56■■■□□ 2
PKD1-226ENST00000562425 CHIC1Q5VXU3 224 aa27.53■■■□□ 2
PKD1-226ENST00000562425 RAPGEF2Q9Y4G8 1499 aa27.44■■□□□ 1.98
PKD1-226ENST00000562425 AEBP2Q6ZN18 517 aaPredicted RBP27.43■■□□□ 1.98
PKD1-226ENST00000562425 JPH4Q96JJ6 628 aa27.43■■□□□ 1.98
PKD1-226ENST00000562425 KIAA0586Q9BVV6 1533 aa27.41■■□□□ 1.98
PKD1-226ENST00000562425 EEA1Q15075 1411 aa27.41■■□□□ 1.98
PKD1-226ENST00000562425 CSRNP3Q8WYN3 585 aa27.39■■□□□ 1.98
PKD1-226ENST00000562425 PRG4Q92954 1404 aaPredicted RBP27.39■■□□□ 1.97
PKD1-226ENST00000562425 PRXQ9BXM0 1461 aa27.32■■□□□ 1.96
PKD1-226ENST00000562425 KIF13AQ9H1H9 1805 aa27.31■■□□□ 1.96
PKD1-226ENST00000562425 FAM9AQ8IZU1 332 aaPredicted RBP27.27■■□□□ 1.96
PKD1-226ENST00000562425 IQGAP2Q13576 1575 aa27.22■■□□□ 1.95
PKD1-226ENST00000562425 MAPKBP1O60336 1514 aa27.2■■□□□ 1.94
PKD1-226ENST00000562425 ABCC10Q5T3U5 1492 aa27.18■■□□□ 1.94
PKD1-226ENST00000562425 CARMIL2Q6F5E8 1435 aa27.17■■□□□ 1.94
PKD1-226ENST00000562425 NPM1P06748 294 aaKnown RBP eCLIP27.17■■□□□ 1.94
PKD1-226ENST00000562425 ADCY10Q96PN6 1610 aa27.12■■□□□ 1.93
PKD1-226ENST00000562425 FAM69CQ0P6D2 419 aa27.1■■□□□ 1.93
PKD1-226ENST00000562425 UGGT2Q9NYU1 1516 aa27.09■■□□□ 1.93
PKD1-226ENST00000562425 DIP2BQ9P265 1576 aa27.09■■□□□ 1.93
PKD1-226ENST00000562425 CTTNBP2Q8WZ74 1663 aa27.08■■□□□ 1.93
PKD1-226ENST00000562425 TNIKQ9UKE5 1360 aa27.06■■□□□ 1.92
PKD1-226ENST00000562425 PTPRGP23470 1445 aa27.05■■□□□ 1.92
PKD1-226ENST00000562425 KIF21BO75037 1637 aa27.03■■□□□ 1.92
PKD1-226ENST00000562425 DISP1Q96F81 1524 aa27.01■■□□□ 1.91
PKD1-226ENST00000562425 GOLGA3Q08378 1498 aa27■■□□□ 1.91
PKD1-226ENST00000562425 TTBK1Q5TCY1 1321 aaPredicted RBP26.99■■□□□ 1.91
PKD1-226ENST00000562425 KIAA0556O60303 1618 aa26.94■■□□□ 1.9
PKD1-226ENST00000562425 UBTFP17480 764 aaKnown RBP26.92■■□□□ 1.9
PKD1-226ENST00000562425 KDM6BO15054 1643 aa26.91■■□□□ 1.9
PKD1-226ENST00000562425 EHMT2Q96KQ7 1210 aa26.88■■□□□ 1.89
PKD1-226ENST00000562425 ABCC2Q92887 1545 aa26.87■■□□□ 1.89
PKD1-226ENST00000562425 TSPOAP1O95153 1857 aa26.86■■□□□ 1.89
PKD1-226ENST00000562425 UACAQ9BZF9 1416 aa26.84■■□□□ 1.89
PKD1-226ENST00000562425 UHRF1BP1LA0JNW5 1464 aa26.82■■□□□ 1.88
PKD1-226ENST00000562425 RANGAP1P46060 587 aaPredicted RBP26.82■■□□□ 1.88
PKD1-226ENST00000562425 PLB1Q6P1J6 1458 aa26.81■■□□□ 1.88
PKD1-226ENST00000562425 P3H3Q8IVL6 736 aa26.81■■□□□ 1.88
PKD1-226ENST00000562425 GLI2P10070 1586 aa26.78■■□□□ 1.88
PKD1-226ENST00000562425 ASXL2Q76L83 1435 aa26.77■■□□□ 1.88
PKD1-226ENST00000562425 SAMD9Q5K651 1589 aa26.75■■□□□ 1.87
PKD1-226ENST00000562425 EFCAB5A4FU69 1503 aa26.7■■□□□ 1.87
PKD1-226ENST00000562425 PPRC1Q5VV67 1664 aaKnown RBP26.69■■□□□ 1.86
PKD1-226ENST00000562425 KDM4FA0A1W2PPD8 638 aa26.68■■□□□ 1.86
PKD1-226ENST00000562425 KDM5BQ9UGL1 1544 aa26.67■■□□□ 1.86
PKD1-226ENST00000562425 ABCA8O94911 1581 aa26.65■■□□□ 1.86
PKD1-226ENST00000562425 FHOD3Q2V2M9 1422 aa26.64■■□□□ 1.85
PKD1-226ENST00000562425 EPRSP07814 1512 aaKnown RBP26.61■■□□□ 1.85
PKD1-226ENST00000562425 MAP3K4Q9Y6R4 1608 aa26.6■■□□□ 1.85
PKD1-226ENST00000562425 TEX14Q8IWB6 1497 aa26.59■■□□□ 1.85
PKD1-226ENST00000562425 ZCCHC11Q5TAX3 1644 aaKnown RBP26.58■■□□□ 1.85
PKD1-226ENST00000562425 ARHGAP35Q9NRY4 1499 aa26.55■■□□□ 1.84
PKD1-226ENST00000562425 RAPGEF6Q8TEU7 1601 aa26.52■■□□□ 1.84
PKD1-226ENST00000562425 FMN1Q68DA7 1419 aa26.5■■□□□ 1.83
PKD1-226ENST00000562425 WDR7Q9Y4E6 1490 aa26.49■■□□□ 1.83
PKD1-226ENST00000562425 ARID3CA6NKF2 412 aa26.48■■□□□ 1.83
PKD1-226ENST00000562425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.47■■□□□ 1.83
PKD1-226ENST00000562425 HNRNPUL2Q1KMD3 747 aaKnown RBP26.47■■□□□ 1.83
PKD1-226ENST00000562425 ATP10BO94823 1461 aa26.47■■□□□ 1.83
PKD1-226ENST00000562425 ADGRL1O94910 1474 aa26.47■■□□□ 1.83
PKD1-226ENST00000562425 COL17A1Q9UMD9 1497 aaPredicted RBP26.47■■□□□ 1.83
PKD1-226ENST00000562425 CLIP1P30622 1438 aa26.45■■□□□ 1.82
PKD1-226ENST00000562425 NUP153P49790 1475 aaKnown RBP26.43■■□□□ 1.82
PKD1-226ENST00000562425 ATP1B4Q9UN42 357 aaPredicted RBP26.4■■□□□ 1.82
PKD1-226ENST00000562425 LOC105371045A0A1W2PR82 267 aa26.39■■□□□ 1.82
PKD1-226ENST00000562425 KCNH8Q96L42 1107 aa26.39■■□□□ 1.82
PKD1-226ENST00000562425 CFAP43Q8NDM7 1665 aa26.38■■□□□ 1.81
PKD1-226ENST00000562425 MAGI3Q5TCQ9 1506 aa26.38■■□□□ 1.81
PKD1-226ENST00000562425 PLEKHD1A6NEE1 506 aa26.35■■□□□ 1.81
PKD1-226ENST00000562425 CD109Q6YHK3 1445 aa26.34■■□□□ 1.81
PKD1-226ENST00000562425 HECW1Q76N89 1606 aa26.31■■□□□ 1.8
PKD1-226ENST00000562425 CEP162Q5TB80 1403 aa26.31■■□□□ 1.8
PKD1-226ENST00000562425 CDK11AQ9UQ88 783 aaPredicted RBP26.28■■□□□ 1.8
PKD1-226ENST00000562425 CASKIN1Q8WXD9 1431 aa26.27■■□□□ 1.8
PKD1-226ENST00000562425 CDK13Q14004 1512 aaKnown RBP26.23■■□□□ 1.79
PKD1-226ENST00000562425 FYCO1Q9BQS8 1478 aa26.19■■□□□ 1.78
PKD1-226ENST00000562425 PCF11O94913 1555 aaKnown RBP26.18■■□□□ 1.78
PKD1-226ENST00000562425 HECW2Q9P2P5 1572 aa26.18■■□□□ 1.78
PKD1-226ENST00000562425 ARAP3Q8WWN8 1544 aa26.18■■□□□ 1.78
PKD1-226ENST00000562425 CCDC18Q5T9S5 1454 aa26.17■■□□□ 1.78
PKD1-226ENST00000562425 PHLDB1Q86UU1 1377 aa26.16■■□□□ 1.78
PKD1-226ENST00000562425 ABCA9Q8IUA7 1624 aa26.14■■□□□ 1.77
PKD1-226ENST00000562425 ILDR1Q86SU0 546 aaPredicted RBP26.11■■□□□ 1.77
PKD1-226ENST00000562425 TROQ12816 1431 aaPredicted RBP26.08■■□□□ 1.77
PKD1-226ENST00000562425 LRRIQ1Q96JM4 1722 aa26.05■■□□□ 1.76
PKD1-226ENST00000562425 NEO1Q92859 1461 aa26.04■■□□□ 1.76
PKD1-226ENST00000562425 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.04■■□□□ 1.76
PKD1-226ENST00000562425 VPS8Q8N3P4 1428 aa26■■□□□ 1.75
PKD1-226ENST00000562425 KIF14Q15058 1648 aa25.99■■□□□ 1.75
PKD1-226ENST00000562425 TTC37Q6PGP7 1564 aa25.96■■□□□ 1.75
PKD1-226ENST00000562425 PLCH2O75038 1416 aa25.95■■□□□ 1.74
PKD1-226ENST00000562425 ADAMTSL3P82987 1691 aa25.94■■□□□ 1.74
PKD1-226ENST00000562425 MTUS2Q5JR59 1369 aa25.94■■□□□ 1.74
PKD1-226ENST00000562425 FANCAO15360 1455 aa25.92■■□□□ 1.74
PKD1-226ENST00000562425 EFCAB2Q5VUJ9 269 aa25.92■■□□□ 1.74
PKD1-226ENST00000562425 AKNAQ7Z591 1439 aa25.89■■□□□ 1.74
PKD1-226ENST00000562425 RAPGEF3O95398 923 aa25.89■■□□□ 1.74
PKD1-226ENST00000562425 PTPRMP28827 1452 aa25.89■■□□□ 1.73
PKD1-226ENST00000562425 FRMPD1Q5SYB0 1578 aa25.89■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms