RNA–Protein interactions for RNA: ENST00000562119.5

PDXDC1-207, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-207ENST00000562119 FAM69CQ0P6D2 419 aa36.21■■■■□ 3.39
PDXDC1-207ENST00000562119 ABCC10Q5T3U5 1492 aa36.2■■■■□ 3.39
PDXDC1-207ENST00000562119 RUSC2Q8N2Y8 1516 aa36.16■■■■□ 3.38
PDXDC1-207ENST00000562119 MAPKBP1O60336 1514 aa36.11■■■■□ 3.37
PDXDC1-207ENST00000562119 NPM1P06748 294 aaKnown RBP eCLIP36.1■■■■□ 3.37
PDXDC1-207ENST00000562119 DIP2BQ9P265 1576 aa36.06■■■■□ 3.36
PDXDC1-207ENST00000562119 ADCY10Q96PN6 1610 aa36.05■■■■□ 3.36
PDXDC1-207ENST00000562119 KDM4FA0A1W2PPD8 638 aa35.95■■■■□ 3.35
PDXDC1-207ENST00000562119 KIAA0586Q9BVV6 1533 aa35.92■■■■□ 3.34
PDXDC1-207ENST00000562119 KDM6BO15054 1643 aa35.9■■■■□ 3.34
PDXDC1-207ENST00000562119 IGF1RP08069 1367 aa35.86■■■■□ 3.33
PDXDC1-207ENST00000562119 TSPOAP1O95153 1857 aa35.79■■■■□ 3.32
PDXDC1-207ENST00000562119 PTPRGP23470 1445 aa35.73■■■■□ 3.31
PDXDC1-207ENST00000562119 KIF27Q86VH2 1401 aa35.72■■■■□ 3.31
PDXDC1-207ENST00000562119 CUL7Q14999 1698 aa35.71■■■■□ 3.31
PDXDC1-207ENST00000562119 TTBK1Q5TCY1 1321 aaPredicted RBP35.66■■■■□ 3.3
PDXDC1-207ENST00000562119 ABCC2Q92887 1545 aa35.62■■■■□ 3.29
PDXDC1-207ENST00000562119 TNIKQ9UKE5 1360 aa35.59■■■■□ 3.29
PDXDC1-207ENST00000562119 ASXL2Q76L83 1435 aa35.58■■■■□ 3.29
PDXDC1-207ENST00000562119 CARMIL1Q5VZK9 1371 aa35.57■■■■□ 3.28
PDXDC1-207ENST00000562119 CARMIL2Q6F5E8 1435 aa35.55■■■■□ 3.28
PDXDC1-207ENST00000562119 PPRC1Q5VV67 1664 aaKnown RBP35.54■■■■□ 3.28
PDXDC1-207ENST00000562119 PLB1Q6P1J6 1458 aa35.53■■■■□ 3.28
PDXDC1-207ENST00000562119 GLI2P10070 1586 aa35.52■■■■□ 3.28
PDXDC1-207ENST00000562119 ILDR1Q86SU0 546 aaPredicted RBP35.52■■■■□ 3.28
PDXDC1-207ENST00000562119 UHRF1BP1LA0JNW5 1464 aa35.48■■■■□ 3.27
PDXDC1-207ENST00000562119 ADGRL1O94910 1474 aa35.45■■■■□ 3.27
PDXDC1-207ENST00000562119 IQGAP2Q13576 1575 aa35.44■■■■□ 3.26
PDXDC1-207ENST00000562119 COL17A1Q9UMD9 1497 aaPredicted RBP35.43■■■■□ 3.26
PDXDC1-207ENST00000562119 UACAQ9BZF9 1416 aa35.42■■■■□ 3.26
PDXDC1-207ENST00000562119 DISP1Q96F81 1524 aa35.39■■■■□ 3.26
PDXDC1-207ENST00000562119 EPRSP07814 1512 aaKnown RBP35.36■■■■□ 3.25
PDXDC1-207ENST00000562119 KDM5BQ9UGL1 1544 aa35.33■■■■□ 3.25
PDXDC1-207ENST00000562119 MAP3K4Q9Y6R4 1608 aa35.31■■■■□ 3.24
PDXDC1-207ENST00000562119 TEX14Q8IWB6 1497 aa35.23■■■■□ 3.23
PDXDC1-207ENST00000562119 UGGT2Q9NYU1 1516 aa35.22■■■■□ 3.23
PDXDC1-207ENST00000562119 ZCCHC11Q5TAX3 1644 aaKnown RBP35.22■■■■□ 3.23
PDXDC1-207ENST00000562119 HECW2Q9P2P5 1572 aa35.17■■■■□ 3.22
PDXDC1-207ENST00000562119 RAPGEF2Q9Y4G8 1499 aa35.15■■■■□ 3.22
PDXDC1-207ENST00000562119 KIAA0556O60303 1618 aa35.14■■■■□ 3.22
PDXDC1-207ENST00000562119 WDR7Q9Y4E6 1490 aa35.1■■■■□ 3.21
PDXDC1-207ENST00000562119 CD109Q6YHK3 1445 aa34.98■■■■□ 3.19
PDXDC1-207ENST00000562119 MAGI3Q5TCQ9 1506 aa34.96■■■■□ 3.19
PDXDC1-207ENST00000562119 KCNH8Q96L42 1107 aa34.93■■■■□ 3.18
PDXDC1-207ENST00000562119 ABCA8O94911 1581 aa34.89■■■■□ 3.18
PDXDC1-207ENST00000562119 CFAP43Q8NDM7 1665 aa34.89■■■■□ 3.18
PDXDC1-207ENST00000562119 GOLGA3Q08378 1498 aa34.84■■■■□ 3.17
PDXDC1-207ENST00000562119 CTTNBP2Q8WZ74 1663 aa34.82■■■■□ 3.16
PDXDC1-207ENST00000562119 KIF21BO75037 1637 aa34.77■■■■□ 3.16
PDXDC1-207ENST00000562119 ARAP3Q8WWN8 1544 aa34.72■■■■□ 3.15
PDXDC1-207ENST00000562119 ARID3CA6NKF2 412 aa34.67■■■■□ 3.14
PDXDC1-207ENST00000562119 PRXQ9BXM0 1461 aa34.65■■■■□ 3.14
PDXDC1-207ENST00000562119 ATP10BO94823 1461 aa34.63■■■■□ 3.13
PDXDC1-207ENST00000562119 FBXO41Q8TF61 875 aa34.6■■■■□ 3.13
PDXDC1-207ENST00000562119 PTPRMP28827 1452 aa34.57■■■■□ 3.12
PDXDC1-207ENST00000562119 P3H3Q8IVL6 736 aa34.56■■■■□ 3.12
PDXDC1-207ENST00000562119 ADAMTSL3P82987 1691 aa34.55■■■■□ 3.12
PDXDC1-207ENST00000562119 RAPGEF3O95398 923 aa34.54■■■■□ 3.12
PDXDC1-207ENST00000562119 ABCA9Q8IUA7 1624 aa34.54■■■■□ 3.12
PDXDC1-207ENST00000562119 PHLDB1Q86UU1 1377 aa34.53■■■■□ 3.12
PDXDC1-207ENST00000562119 FAM9AQ8IZU1 332 aaPredicted RBP34.45■■■■□ 3.11
PDXDC1-207ENST00000562119 NEO1Q92859 1461 aa34.44■■■■□ 3.1
PDXDC1-207ENST00000562119 FRMPD1Q5SYB0 1578 aa34.41■■■■□ 3.1
PDXDC1-207ENST00000562119 BCORL1Q5H9F3 1711 aa34.38■■■■□ 3.09
PDXDC1-207ENST00000562119 MADDQ8WXG6 1647 aa34.36■■■■□ 3.09
PDXDC1-207ENST00000562119 SAMD9Q5K651 1589 aa34.36■■■■□ 3.09
PDXDC1-207ENST00000562119 ARID4BQ4LE39 1312 aaPredicted RBP34.35■■■■□ 3.09
PDXDC1-207ENST00000562119 PCF11O94913 1555 aaKnown RBP34.35■■■■□ 3.09
PDXDC1-207ENST00000562119 RAPGEF6Q8TEU7 1601 aa34.34■■■■□ 3.09
PDXDC1-207ENST00000562119 LMTK3Q96Q04 1460 aa34.33■■■■□ 3.09
PDXDC1-207ENST00000562119 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.32■■■■□ 3.08
PDXDC1-207ENST00000562119 HNRNPUL2Q1KMD3 747 aaKnown RBP34.32■■■■□ 3.08
PDXDC1-207ENST00000562119 NUP153P49790 1475 aaKnown RBP34.28■■■■□ 3.08
PDXDC1-207ENST00000562119 ARHGEF40Q8TER5 1519 aa34.24■■■■□ 3.07
PDXDC1-207ENST00000562119 DENND4BO75064 1496 aaPredicted RBP34.2■■■■□ 3.07
PDXDC1-207ENST00000562119 CSRNP3Q8WYN3 585 aa34.19■■■■□ 3.06
PDXDC1-207ENST00000562119 RIMS1Q86UR5 1692 aaKnown RBP34.19■■■■□ 3.06
PDXDC1-207ENST00000562119 RICTORQ6R327 1708 aa34.16■■■■□ 3.06
PDXDC1-207ENST00000562119 AKNAQ7Z591 1439 aa34.16■■■■□ 3.06
PDXDC1-207ENST00000562119 FHOD3Q2V2M9 1422 aa34.15■■■■□ 3.06
PDXDC1-207ENST00000562119 HSPA2P54652 639 aa34.15■■■■□ 3.06
PDXDC1-207ENST00000562119 PLEKHD1A6NEE1 506 aa34.12■■■■□ 3.05
PDXDC1-207ENST00000562119 RANGAP1P46060 587 aaPredicted RBP34.12■■■■□ 3.05
PDXDC1-207ENST00000562119 FANCAO15360 1455 aa34.12■■■■□ 3.05
PDXDC1-207ENST00000562119 PLPPR3Q6T4P5 718 aa34.09■■■■□ 3.05
PDXDC1-207ENST00000562119 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.08■■■■□ 3.052e-7■■■■■ 47.7
PDXDC1-207ENST00000562119 SIGLEC1Q9BZZ2 1709 aa34.07■■■■□ 3.04
PDXDC1-207ENST00000562119 YEATS2Q9ULM3 1422 aa34.06■■■■□ 3.04
PDXDC1-207ENST00000562119 ZMYM4Q5VZL5 1548 aa34.05■■■■□ 3.04
PDXDC1-207ENST00000562119 POGZQ7Z3K3 1410 aa34.04■■■■□ 3.04
PDXDC1-207ENST00000562119 CFAP74Q9C0B2 1584 aa34.03■■■■□ 3.04
PDXDC1-207ENST00000562119 TTC37Q6PGP7 1564 aa34.02■■■■□ 3.04
PDXDC1-207ENST00000562119 ZFYVE16Q7Z3T8 1539 aa34.02■■■■□ 3.04
PDXDC1-207ENST00000562119 EFCAB5A4FU69 1503 aa33.98■■■■□ 3.03
PDXDC1-207ENST00000562119 MLECQ14165 292 aa33.96■■■■□ 3.03
PDXDC1-207ENST00000562119 MAGI2Q86UL8 1455 aa33.95■■■■□ 3.03
PDXDC1-207ENST00000562119 CERKQ8TCT0 537 aa33.95■■■■□ 3.03
PDXDC1-207ENST00000562119 HECW1Q76N89 1606 aa33.93■■■■□ 3.02
PDXDC1-207ENST00000562119 SCAPERQ9BY12 1400 aa33.88■■■■□ 3.01
PDXDC1-207ENST00000562119 CDK13Q14004 1512 aaKnown RBP33.88■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms