RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 TSPOAP1O95153 1857 aa20.91■□□□□ 0.94
NSMCE1-202ENST00000561960 JPH4Q96JJ6 628 aa20.88■□□□□ 0.93
NSMCE1-202ENST00000561960 ADCY10Q96PN6 1610 aa20.87■□□□□ 0.93
NSMCE1-202ENST00000561960 TTBK1Q5TCY1 1321 aaPredicted RBP20.85■□□□□ 0.93
NSMCE1-202ENST00000561960 FAM69CQ0P6D2 419 aa20.83■□□□□ 0.93
NSMCE1-202ENST00000561960 DIP2BQ9P265 1576 aa20.81■□□□□ 0.92
NSMCE1-202ENST00000561960 ABCC10Q5T3U5 1492 aa20.76■□□□□ 0.91
NSMCE1-202ENST00000561960 NPM1P06748 294 aaKnown RBP eCLIP20.74■□□□□ 0.91
NSMCE1-202ENST00000561960 MAPKBP1O60336 1514 aa20.73■□□□□ 0.91
NSMCE1-202ENST00000561960 KDM6BO15054 1643 aa20.72■□□□□ 0.91
NSMCE1-202ENST00000561960 CUL7Q14999 1698 aa20.71■□□□□ 0.91
NSMCE1-202ENST00000561960 IGF1RP08069 1367 aa20.68■□□□□ 0.9
NSMCE1-202ENST00000561960 KIAA0586Q9BVV6 1533 aa20.67■□□□□ 0.9
NSMCE1-202ENST00000561960 KIF27Q86VH2 1401 aa20.63■□□□□ 0.89
NSMCE1-202ENST00000561960 KDM4FA0A1W2PPD8 638 aa20.59■□□□□ 0.89
NSMCE1-202ENST00000561960 PPRC1Q5VV67 1664 aaKnown RBP20.58■□□□□ 0.89
NSMCE1-202ENST00000561960 PTPRGP23470 1445 aa20.57■□□□□ 0.88
NSMCE1-202ENST00000561960 CARMIL1Q5VZK9 1371 aa20.55■□□□□ 0.88
NSMCE1-202ENST00000561960 IQGAP2Q13576 1575 aa20.55■□□□□ 0.88
NSMCE1-202ENST00000561960 ABCC2Q92887 1545 aa20.51■□□□□ 0.87
NSMCE1-202ENST00000561960 ASXL2Q76L83 1435 aa20.51■□□□□ 0.87
NSMCE1-202ENST00000561960 TNIKQ9UKE5 1360 aa20.48■□□□□ 0.87
NSMCE1-202ENST00000561960 CARMIL2Q6F5E8 1435 aa20.47■□□□□ 0.87
NSMCE1-202ENST00000561960 DISP1Q96F81 1524 aa20.46■□□□□ 0.87
NSMCE1-202ENST00000561960 ZCCHC11Q5TAX3 1644 aaKnown RBP20.45■□□□□ 0.87
NSMCE1-202ENST00000561960 ADGRL1O94910 1474 aa20.4■□□□□ 0.86
NSMCE1-202ENST00000561960 GLI2P10070 1586 aa20.4■□□□□ 0.86
NSMCE1-202ENST00000561960 UACAQ9BZF9 1416 aa20.4■□□□□ 0.86
NSMCE1-202ENST00000561960 MAP3K4Q9Y6R4 1608 aa20.4■□□□□ 0.86
NSMCE1-202ENST00000561960 PLB1Q6P1J6 1458 aa20.39■□□□□ 0.85
NSMCE1-202ENST00000561960 COL17A1Q9UMD9 1497 aaPredicted RBP20.39■□□□□ 0.85
NSMCE1-202ENST00000561960 KIAA0556O60303 1618 aa20.38■□□□□ 0.85
NSMCE1-202ENST00000561960 EPRSP07814 1512 aaKnown RBP20.37■□□□□ 0.85
NSMCE1-202ENST00000561960 CTTNBP2Q8WZ74 1663 aa20.36■□□□□ 0.85
NSMCE1-202ENST00000561960 UHRF1BP1LA0JNW5 1464 aa20.36■□□□□ 0.85
NSMCE1-202ENST00000561960 RAPGEF2Q9Y4G8 1499 aa20.33■□□□□ 0.85
NSMCE1-202ENST00000561960 UGGT2Q9NYU1 1516 aa20.32■□□□□ 0.84
NSMCE1-202ENST00000561960 KDM5BQ9UGL1 1544 aa20.32■□□□□ 0.84
NSMCE1-202ENST00000561960 ILDR1Q86SU0 546 aaPredicted RBP20.28■□□□□ 0.84
NSMCE1-202ENST00000561960 ARID3CA6NKF2 412 aa20.26■□□□□ 0.83
NSMCE1-202ENST00000561960 HECW2Q9P2P5 1572 aa20.25■□□□□ 0.83
NSMCE1-202ENST00000561960 KCNH8Q96L42 1107 aa20.24■□□□□ 0.83
NSMCE1-202ENST00000561960 WDR7Q9Y4E6 1490 aa20.24■□□□□ 0.83
NSMCE1-202ENST00000561960 TEX14Q8IWB6 1497 aa20.23■□□□□ 0.83
NSMCE1-202ENST00000561960 KIF21BO75037 1637 aa20.2■□□□□ 0.82
NSMCE1-202ENST00000561960 CFAP43Q8NDM7 1665 aa20.18■□□□□ 0.82
NSMCE1-202ENST00000561960 ABCA8O94911 1581 aa20.17■□□□□ 0.82
NSMCE1-202ENST00000561960 P3H3Q8IVL6 736 aa20.16■□□□□ 0.82
NSMCE1-202ENST00000561960 CD109Q6YHK3 1445 aa20.14■□□□□ 0.81
NSMCE1-202ENST00000561960 GOLGA3Q08378 1498 aa20.09■□□□□ 0.81
NSMCE1-202ENST00000561960 MAGI3Q5TCQ9 1506 aa20.07■□□□□ 0.8
NSMCE1-202ENST00000561960 RANGAP1P46060 587 aaPredicted RBP20.06■□□□□ 0.8
NSMCE1-202ENST00000561960 PRXQ9BXM0 1461 aa20.03■□□□□ 0.8
NSMCE1-202ENST00000561960 ATP10BO94823 1461 aa19.99■□□□□ 0.79
NSMCE1-202ENST00000561960 RAPGEF6Q8TEU7 1601 aa19.97■□□□□ 0.79
NSMCE1-202ENST00000561960 ABCA9Q8IUA7 1624 aa19.96■□□□□ 0.79
NSMCE1-202ENST00000561960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.95■□□□□ 0.78
NSMCE1-202ENST00000561960 RAPGEF3O95398 923 aa19.95■□□□□ 0.78
NSMCE1-202ENST00000561960 HNRNPUL2Q1KMD3 747 aaKnown RBP19.95■□□□□ 0.78
NSMCE1-202ENST00000561960 SAMD9Q5K651 1589 aa19.95■□□□□ 0.78
NSMCE1-202ENST00000561960 FRMPD1Q5SYB0 1578 aa19.92■□□□□ 0.78
NSMCE1-202ENST00000561960 ARAP3Q8WWN8 1544 aa19.92■□□□□ 0.78
NSMCE1-202ENST00000561960 ADAMTSL3P82987 1691 aa19.91■□□□□ 0.78
NSMCE1-202ENST00000561960 MADDQ8WXG6 1647 aa19.9■□□□□ 0.78
NSMCE1-202ENST00000561960 PLPPR3Q6T4P5 718 aa19.89■□□□□ 0.77
NSMCE1-202ENST00000561960 BCORL1Q5H9F3 1711 aa19.88■□□□□ 0.77
NSMCE1-202ENST00000561960 FHOD3Q2V2M9 1422 aa19.87■□□□□ 0.77
NSMCE1-202ENST00000561960 RIMS1Q86UR5 1692 aaKnown RBP19.87■□□□□ 0.77
NSMCE1-202ENST00000561960 PTPRMP28827 1452 aa19.86■□□□□ 0.77
NSMCE1-202ENST00000561960 ARID4BQ4LE39 1312 aaPredicted RBP19.86■□□□□ 0.77
NSMCE1-202ENST00000561960 FAM9AQ8IZU1 332 aaPredicted RBP19.86■□□□□ 0.77
NSMCE1-202ENST00000561960 EHMT2Q96KQ7 1210 aa19.86■□□□□ 0.77
NSMCE1-202ENST00000561960 NUP153P49790 1475 aaKnown RBP19.85■□□□□ 0.77
NSMCE1-202ENST00000561960 SIGLEC1Q9BZZ2 1709 aa19.83■□□□□ 0.77
NSMCE1-202ENST00000561960 RICTORQ6R327 1708 aa19.82■□□□□ 0.76
NSMCE1-202ENST00000561960 CSRNP3Q8WYN3 585 aa19.81■□□□□ 0.76
NSMCE1-202ENST00000561960 TTC37Q6PGP7 1564 aa19.8■□□□□ 0.76
NSMCE1-202ENST00000561960 NEO1Q92859 1461 aa19.78■□□□□ 0.76
NSMCE1-202ENST00000561960 ARHGEF40Q8TER5 1519 aa19.77■□□□□ 0.76
NSMCE1-202ENST00000561960 CDK13Q14004 1512 aaKnown RBP19.75■□□□□ 0.75
NSMCE1-202ENST00000561960 PCF11O94913 1555 aaKnown RBP19.74■□□□□ 0.75
NSMCE1-202ENST00000561960 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.74■□□□□ 0.75
NSMCE1-202ENST00000561960 LMTK3Q96Q04 1460 aa19.73■□□□□ 0.75
NSMCE1-202ENST00000561960 HSPA2P54652 639 aa19.72■□□□□ 0.75
NSMCE1-202ENST00000561960 MLECQ14165 292 aa19.71■□□□□ 0.75
NSMCE1-202ENST00000561960 FANCAO15360 1455 aa19.71■□□□□ 0.75
NSMCE1-202ENST00000561960 AKNAQ7Z591 1439 aa19.7■□□□□ 0.74
NSMCE1-202ENST00000561960 DENND4BO75064 1496 aaPredicted RBP19.7■□□□□ 0.74
NSMCE1-202ENST00000561960 FER1L4A9Z1Z3 1794 aa19.7■□□□□ 0.74
NSMCE1-202ENST00000561960 PHLDB1Q86UU1 1377 aa19.7■□□□□ 0.74
NSMCE1-202ENST00000561960 YEATS2Q9ULM3 1422 aa19.69■□□□□ 0.74
NSMCE1-202ENST00000561960 FBXO41Q8TF61 875 aa19.69■□□□□ 0.74
NSMCE1-202ENST00000561960 CFAP74Q9C0B2 1584 aa19.69■□□□□ 0.74
NSMCE1-202ENST00000561960 PLEKHD1A6NEE1 506 aa19.67■□□□□ 0.74
NSMCE1-202ENST00000561960 ATP1B4Q9UN42 357 aaPredicted RBP19.67■□□□□ 0.74
NSMCE1-202ENST00000561960 ZFYVE16Q7Z3T8 1539 aa19.66■□□□□ 0.74
NSMCE1-202ENST00000561960 HECW1Q76N89 1606 aa19.65■□□□□ 0.74
NSMCE1-202ENST00000561960 LRRIQ1Q96JM4 1722 aa19.61■□□□□ 0.73
NSMCE1-202ENST00000561960 MYO5CQ9NQX4 1742 aa19.61■□□□□ 0.73
NSMCE1-202ENST00000561960 KIF14Q15058 1648 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms